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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:mba03030]
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 Mbar_A0959 DNA primase
Mbar_A2753 RNase HII
Mbar_A1777 replicative DNA polymerase I
Mbar_A1005 DNA polymerase II small subunit
Mbar_A0899 DNA polymerase II large subunit
Mbar_A1593 replicative DNA helicase Mcm
Mbar_A1571 DNA primase small subunit
Mbar_A0880 DNA primase large subunit
Mbar_A0963 replication factor-A protein
Mbar_A0879 monomeric archaeal DNA polymerase sliding clamp
Mbar_A1582 replication factor C small subunit
Mbar_A0850 replication factor C subunit
Mbar_A2075 replication factor C large subunit
Mbar_A1212 flap endonuclease 1
Mbar_A1899 DNA ligase (ATP)
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K02316 dnaG; DNA primase [EC:2.7.7.101]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
K02683 priS; DNA primase small subunit [EC:2.7.7.102]
K18882 priL; DNA primase large subunit
K07466 RFA1; replication factor A1
K04802 PCNA; proliferating cell nuclear antigen
K04801 rfcS; replication factor C small subunit
K04801 rfcS; replication factor C small subunit
K04800 rfcL; replication factor C large subunit
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03410 Base excision repair [PATH:mba03410]
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Mbar_A2006 8-oxoguanine DNA glycosylase
Mbar_A0569 endonuclease III
Mbar_A0936 endonuclease III
Mbar_A0879 monomeric archaeal DNA polymerase sliding clamp
Mbar_A1212 flap endonuclease 1
Mbar_A1899 DNA ligase (ATP)
Mbar_A1809 DNA polymerase
Mbar_A3242 DNA-(apurinic or apyrimidinic site) lyase
Mbar_A2341 Endonuclease IV
Mbar_A0016 conserved hypothetical protein
Mbar_A1752 single-stranded-DNA-specific exonuclease RecJ
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K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
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03420 Nucleotide excision repair [PATH:mba03420]
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Mbar_A2710 Excinuclease ABC subunit A
Mbar_A2708 Excinuclease ABC subunit B
Mbar_A2709 Excinuclease ABC subunit C
Mbar_A1376 DNA helicase RepD
Mbar_A0963 replication factor-A protein
Mbar_A0879 monomeric archaeal DNA polymerase sliding clamp
Mbar_A1899 DNA ligase (ATP)
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K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K07466 RFA1; replication factor A1
K04802 PCNA; proliferating cell nuclear antigen
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03430 Mismatch repair [PATH:mba03430]
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Mbar_A1495 DNA mismatch repair protein MutS
Mbar_A1044 DNA mismatch repair protein, MutS family
Mbar_A1494 DNA mismatch repair protein MutL
Mbar_A0016 conserved hypothetical protein
Mbar_A1752 single-stranded-DNA-specific exonuclease RecJ
Mbar_A0879 monomeric archaeal DNA polymerase sliding clamp
Mbar_A0963 replication factor-A protein
Mbar_A1899 DNA ligase (ATP)
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K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K04802 PCNA; proliferating cell nuclear antigen
K07466 RFA1; replication factor A1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03440 Homologous recombination [PATH:mba03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:mba03000]
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03021 Transcription machinery [BR:mba03021]
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03019 Messenger RNA biogenesis [BR:mba03019]
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03041 Spliceosome
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03011 Ribosome [BR:mba03011]
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03009 Ribosome biogenesis [BR:mba03009]
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03016 Transfer RNA biogenesis [BR:mba03016]
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03012 Translation factors [BR:mba03012]
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03110 Chaperones and folding catalysts [BR:mba03110]
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04131 Membrane trafficking [BR:mba04131]
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04121 Ubiquitin system [BR:mba04121]
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03051 Proteasome [BR:mba03051]
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03032 DNA replication proteins [BR:mba03032]
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Mbar_A0963 replication factor-A protein
Mbar_A0879 monomeric archaeal DNA polymerase sliding clamp
Mbar_A1212 flap endonuclease 1
Mbar_A1899 DNA ligase (ATP)
Mbar_A1566 conserved hypothetical protein
Mbar_A0082 tRNA pseudouridine synthase B
Mbar_A0959 DNA primase
Mbar_A0976 ORC complex protein Cdc6/Orc1
Mbar_A1200 ORC complex protein Cdc6/Orc1
Mbar_B3760 ORC complex protein Cdc6/Orc1
Mbar_A1593 replicative DNA helicase Mcm
Mbar_A1571 DNA primase small subunit
Mbar_A0880 DNA primase large subunit
Mbar_A1570 conserved hypothetical protein
Mbar_A2753 RNase HII
Mbar_A1777 replicative DNA polymerase I
Mbar_A0899 DNA polymerase II large subunit
Mbar_A1005 DNA polymerase II small subunit
Mbar_A2075 replication factor C large subunit
Mbar_A1582 replication factor C small subunit
Mbar_A0850 replication factor C subunit
Mbar_A2804 DNA gyrase subunit A
Mbar_A2805 DNA gyrase subunit B
Mbar_A2806 type II DNA topoisomerase VI, subunit A
Mbar_A2807 DNA topoisomerase subunit B
Mbar_A2128 DNA topoisomerase, type I
Mbar_A2410 DNA topoisomerase I
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K07466 RFA1; replication factor A1
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K10725 cdc6A; archaeal cell division control protein 6
K10725 cdc6A; archaeal cell division control protein 6
K10725 cdc6A; archaeal cell division control protein 6
K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
K02683 priS; DNA primase small subunit [EC:2.7.7.102]
K18882 priL; DNA primase large subunit
K09723 ginS; DNA replication factor GINS
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
K04800 rfcL; replication factor C large subunit
K04801 rfcS; replication factor C small subunit
K04801 rfcS; replication factor C small subunit
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:mba03036]
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03400 DNA repair and recombination proteins [BR:mba03400]
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Mbar_A0598 O6-methylguanine-DNA methyltransferase
Mbar_A0527 Deoxyribodipyrimidine photo-lyase type II
Mbar_A2006 8-oxoguanine DNA glycosylase
Mbar_A0569 endonuclease III
Mbar_A0936 endonuclease III
Mbar_A0879 monomeric archaeal DNA polymerase sliding clamp
Mbar_A1212 flap endonuclease 1
Mbar_A1899 DNA ligase (ATP)
Mbar_A1376 DNA helicase RepD
Mbar_A0963 replication factor-A protein
Mbar_A0697 8-oxo-dGTPase
Mbar_A0877 MutT-like protein
Mbar_A0752 dCTP deaminase
Mbar_A1809 DNA polymerase
Mbar_A3242 DNA-(apurinic or apyrimidinic site) lyase
Mbar_A2341 Endonuclease IV
Mbar_A0016 conserved hypothetical protein
Mbar_A1752 single-stranded-DNA-specific exonuclease RecJ
Mbar_A2710 Excinuclease ABC subunit A
Mbar_A2708 Excinuclease ABC subunit B
Mbar_A2709 Excinuclease ABC subunit C
Mbar_A1495 DNA mismatch repair protein MutS
Mbar_A1044 DNA mismatch repair protein, MutS family
Mbar_A1494 DNA mismatch repair protein MutL
Mbar_A0360 DNA repair protein RAD50
Mbar_A0359 DNA repair protein
Mbar_A0303 CRISPR-associated protein, Cas1 family
Mbar_A3119 CRISPR-associated exonuclease, Cas4 family / CRISPR-associated protein, Cas1 family
Mbar_A2338 DNA repair protein
Mbar_A1039 DNA repair protein
Mbar_A3508 helicase
Mbar_A2804 DNA gyrase subunit A
Mbar_A2805 DNA gyrase subunit B
Mbar_A2128 DNA topoisomerase, type I
Mbar_A2410 DNA topoisomerase I
Mbar_A1171 ATP-dependent DNA helicase RecQ
Mbar_A2765 DNA polymerase IV
Mbar_A0560 DNA polymerase IV
Mbar_A1642 DNA polymerase X family / putative histidinol phosphatase
Mbar_A1670 ATP dependent helicase, Lhr family
Mbar_A3615 ribonucleotide reductase
Mbar_A0532 conserved hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K07466 RFA1; replication factor A1
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K04483 radA; DNA repair protein RadA
K04484 radB; DNA repair protein RadB
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
K02347 polX; DNA polymerase (family X)
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K22585 nreA; DNA repair protein NreA
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03029 Mitochondrial biogenesis [BR:mba03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Methanosarcina barkeri Fusaro