GFIT result for
sir
|
GFIT result for
sir
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| sir:SiRe_1994 (202 a.a.) |
-- |
K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sic:SiL_1967(202) | 202 | 100.0 | 1292 | 1 | <> | K07464 | cas4 | RecB family exonuclease; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sih:SiH_2061(202) | 202 | 100.0 | 1292 | 1 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sii:LD85_2382(202) | 202 | 99.0 | 1286 | 1 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sin:YN1551_0674(202) | 202 | 99.0 | 1286 | 1 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sis:LS215_2278(202) | 202 | 99.0 | 1286 | 3 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > siy:YG5714_2242(202) | 202 | 99.0 | 1286 | 1 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sia:M1425_2113(202) | 202 | 98.5 | 1283 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sid:M164_2119(202) | 202 | 98.5 | 1283 | 1 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sim:M1627_2195(202) | 202 | 98.5 | 1283 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sshi:J5U23_00249(202) | 202 | 96.5 | 1263 | 1 | <> | K07464 | cas4 | CRISPR-associated RecB family exonuclease Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sule:GFS03_11540(202) | 202 | 92.6 | 1231 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sol:Ssol_0985(202) | 202 | 87.1 | 1169 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sso:SSO0001(202) | 202 | 87.1 | 1169 | 0 | <> | K07464 | cas4 | Hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ssoa:SULA_1018(202) | 202 | 87.1 | 1169 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ssof:SULC_1019(202) | 202 | 87.1 | 1169 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ssol:SULB_1020(202) | 202 | 87.1 | 1169 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > scas:SACC_31870(201) | 202 | 70.3 | 999 | 2 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sula:BFU36_05840(201) | 200 | 69.0 | 993 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sto:STK_23310(203) | 201 | 56.7 | 832 | 1 | <> | K07464 | cas4 | cas4; putative CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > soh:D1869_12795(203) | 201 | 56.7 | 828 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sull:EWF20_13855(203) | 201 | 55.2 | 819 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > abri:DFR85_06340(201) | 201 | 55.7 | 813 | 2 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > asul:DFR86_08015(205) | 203 | 57.1 | 806 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > aman:B6F84_09330(204) | 203 | 57.1 | 799 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > aamb:D1866_00125(201) | 200 | 51.5 | 772 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > csty:KN1_07130(218) | 200 | 52.0 | 763 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sacn:SacN8_01340(203) | 201 | 49.8 | 758 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sacr:SacRon12I_01340(203) | 201 | 49.8 | 758 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sacs:SUSAZ_01385(203) | 201 | 48.8 | 758 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sai:Saci_0274(203) | 201 | 49.8 | 758 | 0 | <> | K07464 | cas4 | conserved protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > sazo:D1868_08475(202) | 199 | 54.3 | 749 | 0 | <> | K07464 | cas4 | cas4; CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > acih:HS5_24440(172) | 172 | 51.2 | 665 | 0 | <> | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > iag:Igag_1219(203) | 206 | 45.6 | 602 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > aho:Ahos_1052(158) | 157 | 50.3 | 600 | 0 | <> | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > apo:Arcpr_1431(192) | 202 | 44.1 | 560 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > memj:MJ1HA_1956(238) | 214 | 37.9 | 539 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > tcb:TCARB_0632(208) | 195 | 43.1 | 526 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > thb:N186_07740(208) | 195 | 43.1 | 526 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > vg:26644731(141) | 139 | 50.4 | 519 | 9 | -- | AVT99_gp57; Sulfolobus monocaudavirus SMV4; hypothetical protein | |||
| > tpe:Tpen_1602(226) | 197 | 42.6 | 517 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > smr:Smar_1195(207) | 205 | 41.0 | 512 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > shc:Shell_1273(207) | 204 | 41.2 | 509 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > tag:Tagg_0099(205) | 201 | 41.8 | 504 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ffo:FFONT_1307(210) | 193 | 42.0 | 503 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > dka:DKAM_0981(214) | 203 | 42.4 | 493 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > dfd:Desfe_1099(208) | 202 | 41.1 | 492 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > dmu:Desmu_0121(215) | 202 | 37.6 | 485 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pare:PYJP_03400(?) | 193 | 38.3 | 479 | 0 | -- | - | |||
| > hbu:Hbut_0944(209) | 197 | 37.1 | 467 | 0 | -- | K07464 | cas4 | conserved archaeal protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pdl:Pyrde_1677(208) | 193 | 38.9 | 465 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pfm:Pyrfu_0578(207) | 191 | 36.1 | 461 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pabi:PABY_16740(?) | 193 | 35.8 | 428 | 0 | -- | - | |||
| > thg:TCELL_0595(197) | 191 | 36.6 | 423 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pmx:PERMA_A0049(234) | 223 | 28.7 | 246 | 1 | -- | K07464 | cas4 | conserved hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > thel:IG193_02990(209) | 190 | 32.1 | 242 | 0 | -- | K07464 | cas4 | PD-(D/E)XK nuclease family protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ccai:NAS2_1530(390) | 203 | 28.1 | 223 | 0 | -- | K07464 | cas4 | Conserved protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > mten:GWK48_07095(228) | 219 | 25.6 | 219 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > mhk:DFR87_04210(222) | 221 | 26.7 | 218 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > smet:RQ359_002176(?) | 224 | 27.7 | 214 | 0 | -- | - | |||
| > thf:MA03_04855(211) | 189 | 32.3 | 212 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > mcn:Mcup_1709(225) | 225 | 25.3 | 210 | 0 | -- | K07464 | cas4 | conserved hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > step:IC006_2051(222) | 225 | 26.2 | 208 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > mjn:MjAS7_1038(222) | 223 | 25.1 | 196 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pcl:Pcal_0546(213) | 174 | 29.3 | 191 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > hno:LT974_16425(372) | 199 | 25.6 | 189 | 0 | -- | K07464 | cas4 | PD-(D/E)XK nuclease family protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > hda:BB347_17480(280) | 133 | 30.1 | 179 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pis:Pisl_1722(218) | 175 | 27.4 | 177 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ipc:IPA_01875(185) | 179 | 26.3 | 175 | 0 | -- | hypothetical protein | |||
| > tne:Tneu_0740(217) | 172 | 27.3 | 171 | 1 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > pyr:P186_0087(214) | 172 | 25.0 | 170 | 1 | -- | K07464 | cas4 | Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > thm:CL1_0382(235) | 239 | 26.8 | 170 | 0 | -- | hypothetical protein | |||
| > tsi:TSIB_1493(231) | 234 | 26.5 | 165 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > hsf:HLASA_1014(373) | 224 | 25.9 | 162 | 1 | -- | hypothetical protein | |||
| > hsu:HLASF_1025(373) | 224 | 25.9 | 162 | 1 | -- | hypothetical protein | |||
| > pabs:JIR001_23010(1196) | 195 | 25.1 | 162 | 4 | -- | K16898 | addA | hypothetical protein; K16898 ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] | |
| > pas:Pars_0755(178) | 172 | 25.6 | 161 | 0 | -- | K07464 | cas4 | CRISPR-associated exonuclease, Cas4 family; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > aob:I6H46_04155(862) | 140 | 27.1 | 160 | 8 | -- | K03657 | uvrD | ATP-dependent helicase; K03657 ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] | |
| > thei:K1720_00480(231) | 229 | 26.2 | 160 | 0 | -- | K07464 | cas4 | PD-(D/E)XK nuclease family protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > neq:NEQ549(267) | 112 | 34.8 | 156 | 0 | -- | K07464 | cas4 | NEQ549; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > ttd:A3L14_11070(220) | 212 | 26.4 | 156 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > hlu:LT972_00015(380) | 194 | 26.3 | 155 | 0 | -- | PD-(D/E)XK nuclease family protein | |||
| > acf:AciM339_0759(330) | 149 | 32.9 | 153 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > fpl:Ferp_0803(169) | 162 | 26.5 | 153 | 0 | -- | K07464 | cas4 | hypothetical protein; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > avg:I6H45_01170(862) | 140 | 27.1 | 152 | 10 | -- | K03657 | uvrD | ATP-dependent helicase; K03657 ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] | |
| > mtee:MTTB_06970(904) | 171 | 28.7 | 152 | 0 | -- | K03657 | uvrD | DNA helicase II; K03657 ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] | |
| > prz:GZH47_33625(294) | 164 | 25.0 | 152 | 0 | -- | hypothetical protein | |||
| > abi:Aboo_0305(323) | 132 | 31.8 | 138 | 0 | -- | K07464 | cas4 | CRISPR-associated protein Cas4; K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] | |
| > cmas:CMASS_02800(1102) | 82 | 34.1 | 135 | 0 | -- | K03657 | uvrD | uvrD2; ATP-dependent DNA helicase UvrD1; K03657 ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] | |
| > cdj:BFC22_02180(780) | 96 | 32.3 | 133 | 1 | -- | K10844 | ERCC2 | ATP-dependent helicase; K10844 DNA excision repair protein ERCC-2 [EC:5.6.2.3] | |
| > epa:110233577(354) | 75 | 32.0 | 132 | 2 | -- | uncharacterized protein LOC110233577 | |||
| > lhb:D1010_02850(796) | 86 | 33.7 | 132 | 1 | -- | K10844 | ERCC2 | ATP-dependent DNA helicase; K10844 DNA excision repair protein ERCC-2 [EC:5.6.2.3] | |
| > ney:NCS13_2_0148(257) | 117 | 33.3 | 128 | 0 | -- | K07164 | K07164 | Putative uncharacterized protein; K07164 uncharacterized protein | |
| > sfy:GFH48_15150(1203) | 116 | 31.0 | 125 | 58 | -- | K03657 | uvrD | AAA family ATPase; K03657 ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] | |
| > otu:111428162(1232) | 86 | 30.2 | 123 | 10 | -- | K10742 | DNA2 | DNA replication ATP-dependent helicase/nuclease DNA2; K10742 DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] | |
| > tis:P3962_08340(183) | 91 | 31.9 | 123 | 1 | -- | K04769 | spoVT | spoVT; stage V sporulation protein T; K04769 AbrB family transcriptional regulator, stage V sporulation protein T | |
| > pot:E2E27_11795(1131) | 70 | 30.0 | 121 | 5 | -- | AAA family ATPase | |||
| > rhoz:GXP67_14080(814) | 126 | 30.2 | 121 | 3 | -- | hypothetical protein | |||
| > cpin:CPIN18020_0383(779) | 129 | 30.2 | 119 | 0 | -- | addB; exonuclease V, helicase AddB | |||
| > lali:LA20249_06885(793) | 91 | 33.0 | 119 | 0 | -- | K10844 | ERCC2 | ATP-dependent helicase; K10844 DNA excision repair protein ERCC-2 [EC:5.6.2.3] | |
| > fhin:M3M39_02470(785) | 108 | 30.6 | 118 | 1 | -- | K10844 | ERCC2 | PD-(D/E)XK nuclease family protein; K10844 DNA excision repair protein ERCC-2 [EC:5.6.2.3] | |