KEGG   PATHWAY: aly00970
Entry
aly00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Arabidopsis lyrata (lyrate rockcress)
Class
Genetic Information Processing; Translation
Pathway map
aly00970  Aminoacyl-tRNA biosynthesis
aly00970

Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
110225776  [KO:K01870] [EC:6.1.1.5]
110226597  [KO:K01881] [EC:6.1.1.15]
110228244  [KO:K01873] [EC:6.1.1.9]
110230188  [KO:K02434] [EC:6.3.5.6 6.3.5.7]
110230665  [KO:K04567] [EC:6.1.1.6]
32283062  trnL; tRNA-Leu [KO:K14228]
32283064  trnV; tRNA-Val [KO:K14237]
32283079  trnW; tRNA-Trp [KO:K14235]
32283087  trnK; tRNA-Lys [KO:K14229]
32283089  trnS; tRNA-Ser [KO:K14233]
32283096  trnS; tRNA-Ser [KO:K14233]
32283101  trnD; tRNA-Asp [KO:K14221]
32283104  trnG; tRNA-Gly [KO:K14225]
32283112  trnI; tRNA-Ile [KO:K14230]
32283113  trnL; tRNA-Leu [KO:K14228]
32283118  trnC; tRNA-Cys [KO:K14222]
32283128  trnQ; tRNA-Gln [KO:K14223]
32283134  trnT; tRNA-Thr [KO:K14234]
32283136  trnV; tRNA-Val [KO:K14237]
32283139  trnI; tRNA-Ile [KO:K14227]
32283141  trnY; tRNA-Tyr [KO:K14236]
32283142  trnT; tRNA-Thr [KO:K14234]
32283145  trnR; tRNA-Arg [KO:K14219]
32283146  trnfM; tRNA-Met [KO:K14230]
32283148  trnA; tRNA-Ala [KO:K14218]
32283153  trnF; tRNA-Phe [KO:K14231]
32283158  trnR; tRNA-Arg [KO:K14219]
32283163  trnN; tRNA-Asn [KO:K14220]
32283165  trnG; tRNA-Gly [KO:K14225]
32283169  trnL; tRNA-Leu [KO:K14228]
32283171  trnM; tRNA-Met [KO:K14230]
32283173  trnP; tRNA-Pro [KO:K14232]
32283174  trnE; tRNA-Glu [KO:K14224]
32283176  trnN; tRNA-Asn [KO:K14220]
32283177  trnL; tRNA-Leu [KO:K14228]
32283178  trnI; tRNA-Ile [KO:K14230]
32283179  trnS; tRNA-Ser [KO:K14233]
32283181  trnI; tRNA-Ile [KO:K14227]
32283184  trnR; tRNA-Arg [KO:K14219]
32283187  trnA; tRNA-Ala [KO:K14218]
32283188  trnV; tRNA-Val [KO:K14237]
32283189  trnH; tRNA-His [KO:K14226]
9298763  [KO:K01893] [EC:6.1.1.22]
9299758  [KO:K01875] [EC:6.1.1.11]
9299871  [KO:K22503] [EC:6.1.1.12]
9300025  [KO:K01870] [EC:6.1.1.5]
9300256  [KO:K01881] [EC:6.1.1.15]
9302236  [KO:K01893] [EC:6.1.1.22]
9302661  [KO:K01885] [EC:6.1.1.17]
9302901  [KO:K01880] [EC:6.1.1.14]
9302912  [KO:K01889] [EC:6.1.1.20]
9303233  [KO:K01876] [EC:6.1.1.12]
9303293  [KO:K02435] [EC:6.3.5.6 6.3.5.7]
9303383  [KO:K22503] [EC:6.1.1.12]
9303643  [KO:K01887] [EC:6.1.1.19]
9304147  [KO:K01893] [EC:6.1.1.22]
9304410  [KO:K01874] [EC:6.1.1.10]
9304982  [KO:K22503] [EC:6.1.1.12]
9306802  [KO:K01870] [EC:6.1.1.5]
9306890  [KO:K01883] [EC:6.1.1.16]
9307101  [KO:K01892] [EC:6.1.1.21]
9307801  [KO:K01873] [EC:6.1.1.9]
9307971  [KO:K01886] [EC:6.1.1.18]
9308089  [KO:K01872] [EC:6.1.1.7]
9308294  [KO:K01885] [EC:6.1.1.17]
9308309  [KO:K01868] [EC:6.1.1.3]
9308339  [KO:K01875] [EC:6.1.1.11]
9308575  [KO:K01870] [EC:6.1.1.5]
9308759  [KO:K01869] [EC:6.1.1.4]
9310336  [KO:K01893] [EC:6.1.1.22]
9310437  [KO:K01875] [EC:6.1.1.11]
9311337  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
9312301  [KO:K22503] [EC:6.1.1.12]
9312368  [KO:K01874] [EC:6.1.1.10]
9312526  [KO:K01889] [EC:6.1.1.20]
9312648  [KO:K04567] [EC:6.1.1.6]
9313426  [KO:K01880] [EC:6.1.1.14]
9313522  [KO:K01892] [EC:6.1.1.21]
9313665  [KO:K14164] [EC:6.1.1.14]
9314146  [KO:K01883] [EC:6.1.1.16]
9314505  [KO:K01881] [EC:6.1.1.15]
9314963  [KO:K01867] [EC:6.1.1.2]
9317228  [KO:K01883] [EC:6.1.1.16]
9317377  [KO:K01866] [EC:6.1.1.1]
9318313  [KO:K01866] [EC:6.1.1.1]
9318811  [KO:K04567] [EC:6.1.1.6]
9319733  [KO:K01868] [EC:6.1.1.3]
9319856  [KO:K01887] [EC:6.1.1.19]
9320403  [KO:K01892] [EC:6.1.1.21]
9320520  [KO:K01867] [EC:6.1.1.2]
9320714  [KO:K01893] [EC:6.1.1.22]
9321035  [KO:K04567] [EC:6.1.1.6]
9321056  [KO:K01887] [EC:6.1.1.19]
9321780  [KO:K01873] [EC:6.1.1.9]
9323031  [KO:K00604] [EC:2.1.2.9]
9323242  [KO:K01886] [EC:6.1.1.18]
9324574  [KO:K00604] [EC:2.1.2.9]
9324581  [KO:K00604] [EC:2.1.2.9]
9324582  [KO:K01887] [EC:6.1.1.19]
9324946  [KO:K01890] [EC:6.1.1.20]
9325826  [KO:K01869] [EC:6.1.1.4]
9325964  [KO:K01875] [EC:6.1.1.11]
9326317  [KO:K01868] [EC:6.1.1.3]
9326324  [KO:K01868] [EC:6.1.1.3]
9326832  [KO:K01866] [EC:6.1.1.1]
9327276  [KO:K01875] [EC:6.1.1.11]
9327620  [KO:K01869] [EC:6.1.1.4]
9328665  [KO:K01874] [EC:6.1.1.10]
9328880  [KO:K01873] [EC:6.1.1.9]
9329491  [KO:K01886] [EC:6.1.1.18]
9329648  [KO:K01880] [EC:6.1.1.14]
9330143  [KO:K01885] [EC:6.1.1.17]
9330298  [KO:K01872] [EC:6.1.1.7]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
aly00250  Alanine, aspartate and glutamate metabolism
aly00260  Glycine, serine and threonine metabolism
aly00270  Cysteine and methionine metabolism
aly00290  Valine, leucine and isoleucine biosynthesis
aly00300  Lysine biosynthesis
aly00330  Arginine and proline metabolism
aly00340  Histidine metabolism
aly00380  Tryptophan metabolism
aly00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

DBGET integrated database retrieval system