KEGG   PATHWAY: bpx00230
Entry
bpx00230                    Pathway                                
Name
Purine metabolism - Paraburkholderia phenoliruptrix
Class
Metabolism; Nucleotide metabolism
Pathway map
bpx00230  Purine metabolism
bpx00230

Module
bpx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bpx00230]
bpx_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bpx00230]
bpx_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bpx00230]
bpx_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bpx00230]
bpx_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bpx00230]
bpx_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:bpx00230]
bpx_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:bpx00230]
Other DBs
GO: 0006163 0042278
Organism
Paraburkholderia phenoliruptrix [GN:bpx]
Gene
BUPH_05144  ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
BUPH_05523  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
BUPH_04198  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BUPH_01478  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
BUPH_05202  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
BUPH_03340  phosphoribosylglycinamide formyltransferase 1 [KO:K11175] [EC:2.1.2.2]
BUPH_05232  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
BUPH_02210  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
BUPH_04349  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
BUPH_03447  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
BUPH_03448  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
BUPH_03449  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
BUPH_03537  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
BUPH_03513  phosphoribosylaminoimidazolecarboxamide formyltransferase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
BUPH_04216  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
BUPH_04246  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
BUPH_02272  5'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
BUPH_01538  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
BUPH_02265  hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
BUPH_06110  inosine/uridine-preferring nucleoside hydrolase [KO:K01239] [EC:3.2.2.1]
BUPH_03609  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
BUPH_02710  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
BUPH_02831  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
BUPH_03284  nucleoside-triphosphatase [KO:K01519] [EC:3.6.1.66]
BUPH_03242  xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
BUPH_04385  xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
BUPH_03243  xanthine dehydrogenase large subunit [KO:K13482] [EC:1.17.1.4]
BUPH_04386  xanthine dehydrogenase large subunit [KO:K13482] [EC:1.17.1.4]
BUPH_00214  xanthine dehydrogenase YagR molybdenum-binding protein subunit [KO:K11177] [EC:1.17.1.4]
BUPH_05872  xanthine dehydrogenase YagR molybdenum-binding protein subunit [KO:K11177] [EC:1.17.1.4]
BUPH_00215  xanthine dehydrogenase YagS FAD-binding protein subunit [KO:K11178] [EC:1.17.1.4]
BUPH_05871  xanthine dehydrogenase YagS FAD-binding protein subunit [KO:K11178] [EC:1.17.1.4]
BUPH_00216  xanthine dehydrogenase YagT iron-sulfur-binding protein subunit [KO:K13483]
BUPH_05870  xanthine dehydrogenase YagT iron-sulfur-binding protein subunit [KO:K13483]
BUPH_02708  GMP synthase [KO:K01951] [EC:6.3.5.2]
BUPH_03870  GMP synthase [KO:K01951] [EC:6.3.5.2]
BUPH_03246  guanine deaminase [KO:K01487] [EC:3.5.4.3]
BUPH_03281  guanylate kinase [KO:K00942] [EC:2.7.4.8]
BUPH_06102  ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
BUPH_03604  ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
BUPH_03602  ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
BUPH_06325  dGTPase [KO:K01129] [EC:3.1.5.1]
BUPH_03280  GTP pyrophosphokinase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
BUPH_03065  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
BUPH_02991  GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
BUPH_02818  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
BUPH_03598  adenosine kinase [KO:K00856] [EC:2.7.1.20]
BUPH_01507  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
BUPH_02659  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
BUPH_02671  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
BUPH_03245  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
BUPH_03377  adenylate kinase [KO:K00939] [EC:2.7.4.3]
BUPH_02927  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
BUPH_00512  ATP adenylyltransferase [KO:K00988] [EC:2.7.7.5 2.7.7.53]
BUPH_04543  apaH; Diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
BUPH_04532  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
BUPH_08421  cysC; Adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
BUPH_05447  sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
BUPH_05448  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
BUPH_01974  5-hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
BUPH_01970  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
BUPH_01968  Hydantoin racemase [KO:K16841] [EC:5.1.99.3]
BUPH_01969  urate catabolism protein [KO:K16842] [EC:3.5.2.5]
BUPH_03559  allantoicase [KO:K01477] [EC:3.5.3.4]
BUPH_01971  allantoicase [KO:K01477] [EC:3.5.3.4]
BUPH_03558  ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
BUPH_01972  ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
BUPH_01408  Ureidoglycolate lyase [KO:K16856] [EC:4.3.2.3]
BUPH_05516  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
BUPH_05515  urease subunit beta [KO:K01429] [EC:3.5.1.5]
BUPH_05514  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
bpx00030  Pentose phosphate pathway
bpx00220  Arginine biosynthesis
bpx00250  Alanine, aspartate and glutamate metabolism
bpx00260  Glycine, serine and threonine metabolism
bpx00340  Histidine metabolism
bpx00630  Glyoxylate and dicarboxylate metabolism
bpx00730  Thiamine metabolism
bpx00740  Riboflavin metabolism
bpx00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system