KEGG   PATHWAY: dha00270
Entry
dha00270                    Pathway                                
Name
Cysteine and methionine metabolism - Debaryomyces hansenii
Description
Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].
Class
Metabolism; Amino acid metabolism
Pathway map
dha00270  Cysteine and methionine metabolism
dha00270

Module
dha_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:dha00270]
dha_M00034  Methionine salvage pathway [PATH:dha00270]
dha_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:dha00270]
Other DBs
GO: 0006534 0006555
Organism
Debaryomyces hansenii [GN:dha]
Gene
DEHA2F16236g  DEHA2F16236p [KO:K01738] [EC:2.5.1.47]
DEHA2B04004g  DEHA2B04004p [KO:K01738] [EC:2.5.1.47]
DEHA2F06094g  DEHA2F06094p [KO:K17069] [EC:2.5.1.49 2.5.1.47]
DEHA2C15686g  DEHA2C15686p [KO:K01758] [EC:4.4.1.1]
DEHA2A06798g  DEHA2A06798p [KO:K01760] [EC:4.4.1.13]
DEHA2C14586g  DEHA2C14586p [KO:K01697] [EC:4.2.1.22]
DEHA2A00616g  DEHA2A00616p [KO:K00547] [EC:2.1.1.10]
DEHA2A07414g  DEHA2A07414p [KO:K00549] [EC:2.1.1.14]
DEHA2E14212g  DEHA2E14212p [KO:K00789] [EC:2.5.1.6]
DEHA2E12254g  DEHA2E12254p [KO:K01611] [EC:4.1.1.50]
DEHA2D10472g  DEHA2D10472p [KO:K00797] [EC:2.5.1.16]
DEHA2E16456g  DEHA2E16456p [KO:K00802] [EC:2.5.1.22]
DEHA2C12166g  DEHA2C12166p [KO:K00772] [EC:2.4.2.28]
DEHA2A01276g  DEHA2A01276p [KO:K08963] [EC:5.3.1.23]
DEHA2G06864g  DEHA2G06864p [KO:K08964] [EC:4.2.1.109]
DEHA2B04158g  DEHA2B04158p [KO:K09880] [EC:3.1.3.77]
DEHA2B15532g  DEHA2B15532p [KO:K08967] [EC:1.13.11.53 1.13.11.54]
DEHA2A06886g  DEHA2A06886p [KO:K00838] [EC:2.6.1.57 2.6.1.39 2.6.1.27 2.6.1.5]
DEHA2E19514g  DEHA2E19514p [KO:K08968] [EC:1.8.4.14]
DEHA2G19910g  DEHA2G19910p [KO:K01251] [EC:3.13.2.1]
DEHA2C07282g  DEHA2C07282p [KO:K00928] [EC:2.7.2.4]
DEHA2D11396g  DEHA2D11396p [KO:K00133] [EC:1.2.1.11]
DEHA2F01298g  DEHA2F01298p [KO:K00003] [EC:1.1.1.3]
DEHA2E23716g  DEHA2E23716p [KO:K00641] [EC:2.3.1.31 2.3.1.46]
DEHA2D09350g  DEHA2D09350p [KO:K01739] [EC:2.5.1.48]
DEHA2D06952g  DEHA2D06952p [KO:K00826] [EC:2.6.1.42]
DEHA2F26444g  DEHA2F26444p [KO:K11204] [EC:6.3.2.2]
DEHA2C15620g  DEHA2C15620p [KO:K21456] [EC:6.3.2.3]
DEHA2E07568g  DEHA2E07568p [KO:K00456] [EC:1.13.11.20]
DEHA2E03630g  DEHA2E03630p [KO:K14454] [EC:2.6.1.1]
DEHA2B03014g  DEHA2B03014p [KO:K14454] [EC:2.6.1.1]
DEHA2B02288g  DEHA2B02288p [KO:K14454] [EC:2.6.1.1]
DEHA2C05236g  DEHA2C05236p [KO:K14455] [EC:2.6.1.1]
DEHA2C12364g  DEHA2C12364p [KO:K01011] [EC:2.8.1.1 2.8.1.2]
DEHA2B02596g  DEHA2B02596p [KO:K00026] [EC:1.1.1.37]
DEHA2B03058g  DEHA2B03058p [KO:K00026] [EC:1.1.1.37]
DEHA2F09020g  DEHA2F09020p [KO:K00026] [EC:1.1.1.37]
DEHA2A02090g  DEHA2A02090p [KO:K17989] [EC:4.3.1.17 4.3.1.19]
DEHA2D01738g  DEHA2D01738p [KO:K17989] [EC:4.3.1.17 4.3.1.19]
DEHA2B11000g  DEHA2B11000p [KO:K00058] [EC:1.1.1.95 1.1.1.399]
DEHA2F02200g  DEHA2F02200p [KO:K00831] [EC:2.6.1.52]
Compound
C00019  S-Adenosyl-L-methionine
C00021  S-Adenosyl-L-homocysteine
C00022  Pyruvate
C00041  L-Alanine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00065  L-Serine
C00073  L-Methionine
C00094  Sulfite
C00097  L-Cysteine
C00109  2-Oxobutanoate
C00155  L-Homocysteine
C00170  5'-Methylthioadenosine
C00197  3-Phospho-D-glycerate
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00409  Methanethiol
C00441  L-Aspartate 4-semialdehyde
C00491  L-Cystine
C00506  L-Cysteate
C00606  3-Sulfino-L-alanine
C00793  D-Cysteine
C00957  Mercaptopyruvate
C00979  O-Acetyl-L-serine
C01005  O-Phospho-L-serine
C01077  O-Acetyl-L-homoserine
C01118  O-Succinyl-L-homoserine
C01137  S-Adenosylmethioninamine
C01180  4-Methylthio-2-oxobutanoic acid
C01234  1-Aminocyclopropane-1-carboxylate
C01817  L-Homocystine
C01962  Thiocysteine
C02218  Dehydroalanine
C02291  L-Cystathionine
C02356  (S)-2-Aminobutanoate
C02989  L-Methionine S-oxide
C03082  4-Phospho-L-aspartate
C03089  5-Methylthio-D-ribose
C03145  N-Formylmethionine
C03232  3-Phosphonooxypyruvate
C03431  S-Inosyl-L-homocysteine
C03539  S-Ribosyl-L-homocysteine
C04188  S-Methyl-5-thio-D-ribose 1-phosphate
C04582  S-Methyl-5-thio-D-ribulose 1-phosphate
C05324  Nicotianamine
C05524  Aminoacyl-L-methionine
C05526  S-Glutathionyl-L-cysteine
C05527  3-Sulfinylpyruvate
C05528  3-Sulfopyruvate
C05823  3-Mercaptolactate
C05824  S-Sulfo-L-cysteine
C06547  Ethylene
C08276  3-(Methylthio)propanoate
C09306  Sulfur dioxide
C11437  1-Deoxy-D-xylulose 5-phosphate
C11481  HSO3-
C11499  (S)-3-Sulfolactate
C11537  (2R)-3-Sulfolactate
C15606  1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one
C15650  2,3-Diketo-5-methylthiopentyl-1-phosphate
C15651  2-Hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
C18049  N-Acyl-L-homoserine lactone
C19787  5'-S-Methyl-5'-thioinosine
C21015  gamma-L-Glutamyl-L-2-aminobutyrate
C21016  Ophthalmate
C22359  S-Methyl-1-thio-D-xylulose 5-phosphate
Reference
  Authors
Sekowska A, Denervaud V, Ashida H, Michoud K, Haas D, Yokota A, Danchin A
  Title
Bacterial variations on the methionine salvage pathway.
  Journal
BMC Microbiol 4:9 (2004)
DOI:10.1186/1471-2180-4-9
Reference
  Authors
Ashida H, Saito Y, Kojima C, Kobayashi K, Ogasawara N, Yokota A.
  Title
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO.
  Journal
Science 302:286-90 (2003)
DOI:10.1126/science.1086997
Reference
  Authors
Sekowska A, Danchin A.
  Title
The methionine salvage pathway in Bacillus subtilis.
  Journal
BMC Microbiol 2:8 (2002)
DOI:10.1186/1471-2180-2-8
Reference
  Authors
Berger BJ, English S, Chan G, Knodel MH.
  Title
Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis.
  Journal
J Bacteriol 185:2418-31 (2003)
DOI:10.1128/JB.185.8.2418-2431.2003
Reference
  Authors
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD
  Title
Functional characterization of a methionine gamma-lyase in Arabidopsis and its implication in an alternative to the reverse trans-sulfuration pathway.
  Journal
Plant Cell Physiol 48:232-42 (2007)
DOI:10.1093/pcp/pcl055
Reference
  Authors
Rebeille F, Jabrin S, Bligny R, Loizeau K, Gambonnet B, Van Wilder V, Douce R, Ravanel S
  Title
Methionine catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and leads to S-methylcysteine and isoleucine syntheses.
  Journal
Proc Natl Acad Sci U S A 103:15687-92 (2006)
DOI:10.1073/pnas.0606195103
Reference
  Authors
Pirkov I, Norbeck J, Gustafsson L, Albers E
  Title
A complete inventory of all enzymes in the eukaryotic methionine salvage pathway.
  Journal
FEBS J 275:4111-20 (2008)
DOI:10.1111/j.1742-4658.2008.06552.x
Reference
  Authors
Ashida H, Saito Y, Kojima C, Yokota A
  Title
Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis.
  Journal
Biosci Biotechnol Biochem 72:959-67 (2008)
DOI:10.1271/bbb.70651
Reference
  Authors
Kitabatake M, So MW, Tumbula DL, Soll D
  Title
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes?
  Journal
J Bacteriol 182:143-5 (2000)
DOI:10.1128/JB.182.1.143-145.2000
Reference
  Authors
Mino K, Ishikawa K
  Title
Characterization of a novel thermostable O-acetylserine sulfhydrylase from Aeropyrum pernix K1.
  Journal
J Bacteriol 185:2277-84 (2003)
DOI:10.1128/JB.185.7.2277-2284.2003
Reference
  Authors
Tanabe S
  Title
Development of assay methods for endogenous inorganic sulfur compounds and sulfurtransferases and evaluation of the physiological functions of bound sulfur.
  Journal
Yakugaku Zasshi 128:881-900 (2008)
DOI:10.1248/yakushi.128.881
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL
  Title
Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing.
  Journal
Nat Chem Biol 5:251-7 (2009)
DOI:10.1038/nchembio.153
Related
pathway
dha00010  Glycolysis / Gluconeogenesis
dha00250  Alanine, aspartate and glutamate metabolism
dha00260  Glycine, serine and threonine metabolism
dha00290  Valine, leucine and isoleucine biosynthesis
dha00430  Taurine and hypotaurine metabolism
dha00480  Glutathione metabolism
dha00620  Pyruvate metabolism
dha00640  Propanoate metabolism
dha00770  Pantothenate and CoA biosynthesis
dha00900  Terpenoid backbone biosynthesis
dha00920  Sulfur metabolism
KO pathway
ko00270   
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