KEGG   PATHWAY: dnm04612
Entry
dnm04612                    Pathway                                
Name
Antigen processing and presentation - Dasypus novemcinctus (nine-banded armadillo)
Class
Organismal Systems; Immune system
Pathway map
dnm04612  Antigen processing and presentation
dnm04612

Other DBs
GO: 0019885 0019886 0042591
Organism
Dasypus novemcinctus (nine-banded armadillo) [GN:dnm]
Gene
101422877  IFNG; interferon gamma [KO:K04687]
101420445  TNF; tumor necrosis factor [KO:K03156]
101445479  PSME1; proteasome activator complex subunit 1 [KO:K06696]
101437584  PSME2; proteasome activator complex subunit 2 [KO:K06697]
105747350  proteasome activator complex subunit 3 [KO:K06698]
101446749  PSME3; LOW QUALITY PROTEIN: proteasome activator complex subunit 3 [KO:K06698]
101420025  heat shock 70 kDa protein 1-like [KO:K03283]
101419752  heat shock-related 70 kDa protein 2-like [KO:K03283]
101411149  HSPA8; heat shock cognate 71 kDa protein [KO:K03283]
101414850  HSPA6; heat shock 70 kDa protein 6 [KO:K03283]
101419052  HSPA2; LOW QUALITY PROTEIN: heat shock-related 70 kDa protein 2 [KO:K26598]
101418570  HSPA4; heat shock 70 kDa protein 4 isoform X1 [KO:K09489]
101442872  heat shock protein HSP 90-alpha A2 [KO:K04079]
101428513  class I histocompatibility antigen, Gogo-B*0102 alpha chain-like [KO:K06751]
101420800  saoe class I histocompatibility antigen, A alpha chain-like isoform X2 [KO:K06751]
101415823  patr class I histocompatibility antigen, A-2 alpha chain-like [KO:K06751]
101418741  HLA class I histocompatibility antigen, A-30 alpha chain-like [KO:K06751]
101446223  saoe class I histocompatibility antigen, A alpha chain-like isoform X1 [KO:K06751]
101415391  HLA class I histocompatibility antigen, A-11 alpha chain-like [KO:K06751]
101439136  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101439564  patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751]
101435448  HLA class I histocompatibility antigen, B-46 alpha chain-like [KO:K06751]
111758663  HLA class I histocompatibility antigen, A-30 alpha chain-like [KO:K06751]
101430252  class I histocompatibility antigen, Gogo-B*0101 alpha chain-like isoform X2 [KO:K06751]
101444704  popy Class I histocompatibility antigen, A-1 alpha chain-like [KO:K06751]
101426756  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101438484  patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751]
101411165  popy Class I histocompatibility antigen, A-1 alpha chain-like [KO:K06751]
101427038  HLA class I histocompatibility antigen, B-37 alpha chain-like isoform X1 [KO:K06751]
101412608  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X1 [KO:K06751]
101447227  HLA class I histocompatibility antigen, Cw-14 alpha chain-like [KO:K06751]
101442840  HLA class I histocompatibility antigen, alpha chain G-like isoform X1 [KO:K06751]
101411454  HLA class I histocompatibility antigen, alpha chain G-like [KO:K06751]
101413764  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101415824  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X1 [KO:K06751]
105744147  saoe class I histocompatibility antigen, A alpha chain-like isoform X2 [KO:K06751]
101441690  saoe class I histocompatibility antigen, A alpha chain-like isoform X1 [KO:K06751]
101444673  patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751]
101428809  HLA class I histocompatibility antigen, B-59 alpha chain-like [KO:K06751]
101412139  LOW QUALITY PROTEIN: saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101442557  HLA class I histocompatibility antigen, alpha chain G-like [KO:K06751]
101432742  patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751]
101437850  H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X3 [KO:K06751]
101422560  saoe class I histocompatibility antigen, A alpha chain-like isoform X2 [KO:K06751]
101427325  patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751]
101445227  saoe class I histocompatibility antigen, A alpha chain-like isoform X2 [KO:K06751]
101421532  saoe class I histocompatibility antigen, A alpha chain-like isoform X1 [KO:K06751]
101424781  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101430113  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101435675  HLA class I histocompatibility antigen, B-15 alpha chain-like isoform X2 [KO:K06751]
101419419  HLA class I histocompatibility antigen, B-73 alpha chain-like [KO:K06751]
101442251  HLA class I histocompatibility antigen, Cw-3 alpha chain-like [KO:K06751]
101439095  saoe class I histocompatibility antigen, A alpha chain-like isoform X1 [KO:K06751]
101411831  HLA class I histocompatibility antigen, B-38 alpha chain-like [KO:K06751]
101422917  patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751]
101412902  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X1 [KO:K06751]
101422259  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101412468  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101414493  HLA class I histocompatibility antigen, B-42 alpha chain-like isoform X1 [KO:K06751]
101442691  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101432034  H-2 class I histocompatibility antigen, Q10 alpha chain-like [KO:K06751]
101424334  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101415212  saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751]
101442654  BOLA class I histocompatibility antigen, alpha chain BL3-6-like [KO:K06751]
101433325  HSPA5; 78 kDa glucose-regulated protein [KO:K09490] [EC:3.6.4.10]
101438057  CANX; calnexin [KO:K08054]
101436907  B2M; beta-2-microglobulin [KO:K08055]
101428219  PDIA3; protein disulfide-isomerase A3 [KO:K08056] [EC:5.3.4.1]
101426244  CALR; calreticulin [KO:K08057]
101439276  calreticulin-like [KO:K08057]
101429953  TAPBP; tapasin [KO:K08058]
101433457  TAP1; antigen peptide transporter 1 [KO:K05653] [EC:7.4.2.14]
101423323  TAP2; antigen peptide transporter 2 [KO:K05654] [EC:7.4.2.14]
101423203  CD8A; T-cell surface glycoprotein CD8 alpha chain [KO:K06458]
101421485  CD8B; T-cell surface glycoprotein CD8 beta chain [KO:K06459]
101429122  LOW QUALITY PROTEIN: NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101434090  NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101413140  NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101424698  NKG2-A/NKG2-B type II integral membrane protein-like isoform X1 [KO:K06541]
101425586  NKG2-A/NKG2-B type II integral membrane protein-like isoform X1 [KO:K06541]
101427070  NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101429553  NKG2-A/NKG2-B type II integral membrane protein-like isoform X1 [KO:K06541]
101436645  NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101438360  NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101431999  NKG2-A/NKG2-B type II integral membrane protein-like [KO:K06541]
101421021  natural killer cells antigen CD94 isoform X1 [KO:K06516]
101422351  natural killer cells antigen CD94-like isoform X3 [KO:K06516]
101428380  natural killer cells antigen CD94-like [KO:K06516]
101414445  natural killer cells antigen CD94-like [KO:K06516]
101431573  natural killer cells antigen CD94-like [KO:K06516]
101433785  IFI30; gamma-interferon-inducible lysosomal thiol reductase [KO:K08059]
101423287  LGMN; legumain [KO:K01369] [EC:3.4.22.34]
101422184  CTSB; cathepsin B isoform X2 [KO:K01363] [EC:3.4.22.1]
101415145  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP beta 1 chain-like [KO:K06752]
101437028  LOW QUALITY PROTEIN: DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
101443412  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DRB1-4 beta chain-like [KO:K06752]
101438478  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
101440773  HLA class II histocompatibility antigen, DQ beta 2 chain-like [KO:K06752]
101433781  HLA class II histocompatibility antigen, DO beta chain isoform X1 [KO:K06752]
101435501  HLA class II histocompatibility antigen, DQ alpha 1 chain-like [KO:K06752]
101435917  HLA class II histocompatibility antigen, DQ alpha 2 chain-like isoform X1 [KO:K06752]
101436345  DLA class II histocompatibility antigen, DR-1 beta chain-like isoform X1 [KO:K06752]
101437751  HLA class II histocompatibility antigen, DRB1-4 beta chain-like [KO:K06752]
101415573  HLA class II histocompatibility antigen, DP beta 1 chain-like isoform X1 [KO:K06752]
101417015  HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1 [KO:K06752]
101417743  HLA class II histocompatibility antigen, DO alpha chain isoform X1 [KO:K06752]
101421271  HLA class II histocompatibility antigen, DM alpha chain [KO:K06752]
101421706  HLA class II histocompatibility antigen, DM beta chain [KO:K06752]
101444072  CD74; HLA class II histocompatibility antigen gamma chain isoform X1 [KO:K06505]
101419436  CTSL; cathepsin L1 [KO:K01365] [EC:3.4.22.15]
101429282  cathepsin L1-like isoform X1 [KO:K01365] [EC:3.4.22.15]
101441455  CTSS; LOW QUALITY PROTEIN: cathepsin S [KO:K01368] [EC:3.4.22.27]
101411381  CD4; T-cell surface glycoprotein CD4 isoform X1 [KO:K06454]
101426564  CIITA; MHC class II transactivator [KO:K08060] [EC:2.7.11.1]
101425907  RFX5; LOW QUALITY PROTEIN: DNA-binding protein RFX5 [KO:K08061]
101413128  DNA-binding protein RFXANK-like [KO:K08062]
101432051  RFXAP; regulatory factor X-associated protein [KO:K08063]
101434860  CREB1; cyclic AMP-responsive element-binding protein 1 [KO:K05870]
101438303  NFYA; nuclear transcription factor Y subunit alpha isoform X1 [KO:K08064]
101435044  NFYB; nuclear transcription factor Y subunit beta isoform X1 [KO:K08065]
101430266  nuclear transcription factor Y subunit beta-like [KO:K08065]
101426918  NFYC; nuclear transcription factor Y subunit gamma isoform X1 [KO:K08066]
Reference
PMID:15771591
  Authors
Trombetta ES, Mellman I.
  Title
Cell biology of antigen processing in vitro and in vivo.
  Journal
Annu Rev Immunol 23:975-1028 (2005)
DOI:10.1146/annurev.immunol.22.012703.104538
Reference
PMID:15814328
  Authors
Inaba K, Inaba M.
  Title
Antigen recognition and presentation by dendritic cells.
  Journal
Int J Hematol 81:181-7 (2005)
DOI:10.1532/IJH97.04200
Reference
PMID:11905820
  Authors
Heath WR, Carbone FR.
  Title
Cross-presentation in viral immunity and self-tolerance.
  Journal
Nat Rev Immunol 1:126-34 (2001)
DOI:10.1038/35100512
Reference
PMID:15304636
  Authors
Abele R, Tampe R.
  Title
The ABCs of immunology: structure and function of TAP, the transporter associated with antigen processing.
  Journal
Physiology (Bethesda) 19:216-24 (2004)
DOI:10.1152/physiol.00002.2004
Reference
PMID:16200082
  Authors
Reith W, LeibundGut-Landmann S, Waldburger JM.
  Title
Regulation of MHC class II gene expression by the class II transactivator.
  Journal
Nat Rev Immunol 5:793-806 (2005)
DOI:10.1038/nri1708
Reference
PMID:12776207
  Authors
Honey K, Rudensky AY.
  Title
Lysosomal cysteine proteases regulate antigen presentation.
  Journal
Nat Rev Immunol 3:472-82 (2003)
DOI:10.1038/nri1110
Reference
PMID:12974477
  Authors
Sercarz EE, Maverakis E.
  Title
Mhc-guided processing: binding of large antigen fragments.
  Journal
Nat Rev Immunol 3:621-9 (2003)
DOI:10.1038/nri1149
Reference
PMID:15224093
  Authors
Ackerman AL, Cresswell P.
  Title
Cellular mechanisms governing cross-presentation of exogenous antigens.
  Journal
Nat Immunol 5:678-84 (2004)
DOI:10.1038/ni1082
Reference
PMID:16181333
  Authors
Cresswell P, Ackerman AL, Giodini A, Peaper DR, Wearsch PA.
  Title
Mechanisms of MHC class I-restricted antigen processing and cross-presentation.
  Journal
Immunol Rev 207:145-57 (2005)
DOI:10.1111/j.0105-2896.2005.00316.x
Reference
PMID:15653312
  Authors
Zika E, Ting JP.
  Title
Epigenetic control of MHC-II: interplay between CIITA and histone-modifying enzymes.
  Journal
Curr Opin Immunol 17:58-64 (2005)
DOI:10.1016/j.coi.2004.11.008
Reference
PMID:11244040
  Authors
Reith W, Mach B.
  Title
The bare lymphocyte syndrome and the regulation of MHC expression.
  Journal
Annu Rev Immunol 19:331-73 (2001)
DOI:10.1146/annurev.immunol.19.1.331
Reference
PMID:15745856
  Authors
Lizee G, Basha G, Jefferies WA.
  Title
Tails of wonder: endocytic-sorting motifs key for exogenous antigen presentation.
  Journal
Trends Immunol 26:141-9 (2005)
DOI:10.1016/j.it.2005.01.005
Reference
PMID:15224094
  Authors
Watts C.
  Title
The exogenous pathway for antigen presentation on major histocompatibility complex class II and CD1 molecules.
  Journal
Nat Immunol 5:685-92 (2004)
DOI:10.1038/ni1088
Reference
PMID:15653315
  Authors
Kaufmann SH, Schaible UE.
  Title
Antigen presentation and recognition in bacterial infections.
  Journal
Curr Opin Immunol 17:79-87 (2005)
DOI:10.1016/j.coi.2004.12.004
Reference
PMID:20010787
  Authors
Groettrup M, Kirk CJ, Basler M
  Title
Proteasomes in immune cells: more than peptide producers?
  Journal
Nat Rev Immunol 10:73-8 (2010)
DOI:10.1038/nri2687
Related
pathway
dnm03050  Proteasome
dnm04650  Natural killer cell mediated cytotoxicity
dnm04660  T cell receptor signaling pathway
KO pathway
ko04612   
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