KEGG   PATHWAY: ido00040
Entry
ido00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Isoptericola dokdonensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
ido00040  Pentose and glucuronate interconversions
ido00040

Module
ido_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ido00040]
Organism
Isoptericola dokdonensis [GN:ido]
Gene
I598_0678  pemA_1; Pectinesterase A precursor [KO:K01051] [EC:3.1.1.11]
I598_3112  pelA_2; Pectate trisaccharide-lyase precursor [KO:K01051 K01728] [EC:3.1.1.11 4.2.2.2]
I598_3113  pelA_3; Pectate trisaccharide-lyase precursor [KO:K01051 K01728] [EC:3.1.1.11 4.2.2.2]
I598_3137  rhgT; Rhamnogalacturonan acetylesterase RhgT [KO:K01051] [EC:3.1.1.11]
I598_2089  pelA_1; Pectate trisaccharide-lyase precursor [KO:K01728] [EC:4.2.2.2]
I598_2471  pel_2; Pectate lyase precursor [KO:K01728] [EC:4.2.2.2]
I598_2468  pel_1; Pectate trisaccharide-lyase precursor [KO:K01728] [EC:4.2.2.2]
I598_2859  pelX; Pectate disaccharide-lyase precursor [KO:K22994] [EC:4.2.2.9]
I598_2660  kduI1; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1 [KO:K01815] [EC:5.3.1.17]
I598_2661  kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [KO:K00065] [EC:1.1.1.127]
I598_1833  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
I598_1834  uxuA; Mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
I598_1831  por; Polyol:NADP oxidoreductase [KO:K00040] [EC:1.1.1.57]
I598_3313  tuaD; UDP-glucose 6-dehydrogenase TuaD [KO:K00012] [EC:1.1.1.22]
I598_0662  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
I598_1471  ulaF; L-ribulose-5-phosphate 4-epimerase UlaF [KO:K03077] [EC:5.1.3.4]
I598_0606  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
I598_1470  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
I598_3139  xylB_2; Xylulose kinase [KO:K00854] [EC:2.7.1.17]
I598_3140  xylA; Xylose isomerase [KO:K01805] [EC:5.3.1.5]
I598_2577  xyoA; putative xylitol oxidase [KO:K00594] [EC:1.1.3.41]
I598_0880  xylose isomerase [KO:K01820] [EC:5.3.1.14 5.3.1.-]
I598_0878  rhaB; Rhamnulokinase [KO:K00848] [EC:2.7.1.5]
I598_2355  Alpha-ketoglutaric semialdehyde dehydrogenase [KO:K13877] [EC:1.2.1.26]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
ido00010  Glycolysis / Gluconeogenesis
ido00020  Citrate cycle (TCA cycle)
ido00030  Pentose phosphate pathway
ido00052  Galactose metabolism
ido00053  Ascorbate and aldarate metabolism
ido00500  Starch and sucrose metabolism
ido00520  Amino sugar and nucleotide sugar metabolism
ido00561  Glycerolipid metabolism
ido00562  Inositol phosphate metabolism
ido00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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