KEGG   PATHWAY: msam00240
Entry
msam00240                   Pathway                                
Name
Pyrimidine metabolism - Micropterus salmoides (largemouth bass)
Class
Metabolism; Nucleotide metabolism
Pathway map
msam00240  Pyrimidine metabolism
msam00240

Module
msam_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:msam00240]
msam_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:msam00240]
msam_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msam00240]
msam_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msam00240]
msam_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msam00240]
Other DBs
GO: 0006220 0006213
Organism
Micropterus salmoides (largemouth bass) [GN:msam]
Gene
119883552  [KO:K10807] [EC:1.17.4.1]
119884213  [KO:K01511] [EC:3.6.1.6]
119886188  cdab; cytidine deaminase b [KO:K01489] [EC:3.5.4.5]
119886503  nme3; nucleoside diphosphate kinase 3 isoform X1 [KO:K00940] [EC:2.7.4.6]
119886744  nme4; nucleoside diphosphate kinase, mitochondrial isoform X1 [KO:K00940] [EC:2.7.4.6]
119886827  nudt2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] [KO:K01518] [EC:3.6.1.17]
119887135  [KO:K16330] [EC:4.2.1.70 2.7.1.83]
119887178  [KO:K01081] [EC:3.1.3.5]
119890207  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1 [KO:K01520] [EC:3.6.1.23]
119890217  cant1a; soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
119890447  [KO:K00254] [EC:1.3.5.2]
119890453  [KO:K00254] [EC:1.3.5.2]
119890904  [KO:K01518] [EC:3.6.1.17]
119891745  upb1; beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
119891821  entpd4; ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
119892486  [KO:K24242]
119893414  [KO:K01081] [EC:3.1.3.5]
119893481  zgc:136858; pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
119895074  [KO:K00758] [EC:2.4.2.4]
119895250  zgc:110540; deoxynucleoside kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
119895661  [KO:K10807] [EC:1.17.4.1]
119895683  [KO:K00940] [EC:2.7.4.6]
119897007  nt5c3a; cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242]
119897317  [KO:K01937] [EC:6.3.4.2]
119897704  upp1; uridine phosphorylase 1 isoform X1 [KO:K00757] [EC:2.4.2.3]
119897906  entpd3; ectonucleoside triphosphate diphosphohydrolase 3 [KO:K01510] [EC:3.6.1.5]
119898047  dpys; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
119898839  dctpp1; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K16904] [EC:3.6.1.12]
119899551  cant1b; soluble calcium-activated nucleotidase 1b isoform X1 [KO:K12304] [EC:3.6.1.6]
119899555  tk1; thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
119899581  nt5c2b; cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
119900127  [KO:K00757] [EC:2.4.2.3]
119901150  nme7; nucleoside diphosphate kinase 7 [KO:K00940] [EC:2.7.4.6]
119901186  dtymk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
119901227  uck2a; uridine-cytidine kinase 2-A [KO:K00876] [EC:2.7.1.48]
119902306  cmpk; UMP-CMP kinase isoform X1 [KO:K13800] [EC:2.7.4.14]
119902377  uck2b; uridine-cytidine kinase 2-B [KO:K00876] [EC:2.7.1.48]
119902592  dpydb; dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
119903259  [KO:K01937] [EC:6.3.4.2]
119903883  umps; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
119904036  [KO:K00757] [EC:2.4.2.3]
119904378  asmtl; probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform X1 [KO:K25435]
119905088  uckl1a; uridine-cytidine kinase-like 1a [KO:K00876] [EC:2.7.1.48]
119905396  uckl1b; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
119907837  nt5c1aa; 5'-nucleotidase, cytosolic IAa isoform X1 [KO:K01081] [EC:3.1.3.5]
119907940  [KO:K01513] [EC:3.1.4.1 3.6.1.9]
119908144  rrm2b; ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
119908154  [KO:K01513] [EC:3.1.4.1 3.6.1.9]
119908527  hddc2; HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
119908554  [KO:K01081] [EC:3.1.3.5]
119908559  enpp1; ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
119908638  si:ch211-243j20.2; uridine-cytidine kinase-like 1 [KO:K00876] [EC:2.7.1.48]
119908838  nt5e; 5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
119909048  cad; CAD protein isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
119909251  nme6; nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
119909282  [KO:K01511] [EC:3.6.1.6]
119909413  [KO:K10808] [EC:1.17.4.1]
119909793  [KO:K01081] [EC:3.1.3.5]
119910218  entpd5a; ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
119910492  dctd; deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
119910891  cmpk2; LOW QUALITY PROTEIN: UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
119911032  [KO:K19970] [EC:3.1.3.5]
119911187  tyms; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
119911360  [KO:K01511] [EC:3.6.1.6]
119912044  [KO:K01081] [EC:3.1.3.5]
119912714  [KO:K01081] [EC:3.1.3.5]
119913287  [KO:K01489] [EC:3.5.4.5]
119913422  [KO:K01081] [EC:3.1.3.5]
119914098  dck; deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
119914121  uck1; uridine-cytidine kinase 1 [KO:K00876] [EC:2.7.1.48]
119914426  nt5c2l1; 5'-nucleotidase, cytosolic II, like 1 [KO:K01081] [EC:3.1.3.5]
119915250  [KO:K00876] [EC:2.7.1.48]
119915771  [KO:K24242]
119915802  entpd1; ectonucleoside triphosphate diphosphohydrolase 1 isoform X1 [KO:K01510] [EC:3.6.1.5]
119916063  [KO:K00940] [EC:2.7.4.6]
119916146  [KO:K01081] [EC:3.1.3.5]
119916743  ak9; adenylate kinase 9 isoform X1 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
119917122  tk2; thymidine kinase 2, mitochondrial isoform X1 [KO:K00857] [EC:2.7.1.21]
119917503  nt5c2a; 5'-nucleotidase, cytosolic IIa isoform X1 [KO:K01081] [EC:3.1.3.5]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
msam00030  Pentose phosphate pathway
msam00220  Arginine biosynthesis
msam00250  Alanine, aspartate and glutamate metabolism
msam00280  Valine, leucine and isoleucine degradation
msam00410  beta-Alanine metabolism
KO pathway
ko00240   

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