KEGG   PATHWAY: nnt04350
Entry
nnt04350                    Pathway                                
Name
TGF-beta signaling pathway - Nestor notabilis (Kea)
Description
The transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species ranging from worms and insects to mammals. A wide spectrum of cellular functions such as proliferation, apoptosis, differentiation and migration are regulated by TGF-beta family members. TGF-beta family member binds to the Type II receptor and recruits Type I, whereby Type II receptor phosphorylates and activates Type I. The Type I receptor, in turn, phosphorylates receptor-activated Smads ( R-Smads: Smad1, Smad2, Smad3, Smad5, and Smad8). Once phosphorylated, R-Smads associate with the co-mediator Smad, Smad4, and the heteromeric complex then translocates into the nucleus. In the nucleus, Smad complexes activate specific genes through cooperative interactions with other DNA-binding and coactivator (or co-repressor) proteins.
Class
Environmental Information Processing; Signal transduction
Pathway map
nnt04350  TGF-beta signaling pathway
nnt04350

Other DBs
GO: 0007179
Organism
Nestor notabilis (Kea) [GN:nnt]
Gene
104399292  GDF5; growth/differentiation factor 5 [KO:K04664]
104399424  RBX1; E3 ubiquitin-protein ligase RBX1 [KO:K03868] [EC:2.3.2.32]
104399512  [KO:K04500]
104399585  TFRC; transferrin receptor protein 1 [KO:K06503]
104399635  LEMD3; inner nuclear membrane protein Man1 [KO:K19410]
104399856  RPS6KB1; ribosomal protein S6 kinase beta-1 isoform X1 [KO:K04688] [EC:2.7.11.1]
104400129  THBS1; thrombospondin-1 [KO:K16857]
104400200  [KO:K04673] [EC:2.7.11.30]
104400226  SKIL; ski-like protein isoform X1 [KO:K18499]
104400254  [KO:K06067] [EC:3.5.1.98]
104400312  E2F5; transcription factor E2F5 [KO:K04682]
104400446  [KO:K04382] [EC:3.1.3.16]
104400570  TFDP1; transcription factor Dp-1 [KO:K04683]
104400787  NRROS; negative regulator of reactive oxygen species [KO:K26317]
104400814  ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679]
104400917  RGMB; RGM domain family member B [KO:K06847]
104400981  [KO:K04382] [EC:3.1.3.16]
104401567  [KO:K17694]
104401705  CREBBP; LOW QUALITY PROTEIN: CREB-binding protein [KO:K04498] [EC:2.3.1.48]
104401749  SIN3A; paired amphipathic helix protein Sin3a [KO:K11644]
104401827  [KO:K04679]
104401830  RHOA; transforming protein RhoA [KO:K04513]
104401876  INHBC; inhibin beta C chain [KO:K22688]
104401990  LTBP1; latent-transforming growth factor beta-binding protein 1 [KO:K19559]
104402064  [KO:K16790]
104402350  BMP6; bone morphogenetic protein 6 [KO:K16620]
104402372  [KO:K26316]
104402510  E2F4; transcription factor E2F4 [KO:K04682]
104402648  SMURF1; E3 ubiquitin-protein ligase SMURF1 [KO:K04678] [EC:2.3.2.26]
104402769  CUL1; cullin-1 [KO:K03347]
104402914  [KO:K23377]
104403196  FMOD; fibromodulin [KO:K08121]
104403325  [KO:K21283]
104403613  [KO:K04666]
104403821  [KO:K04514] [EC:2.7.11.39]
104404217  SKI; ski oncogene [KO:K26503]
104404513  [KO:K04388] [EC:2.7.11.30]
104404727  [KO:K06766]
104405000  [KO:K13567] [EC:2.7.11.30]
104405131  [KO:K04675] [EC:2.7.11.30]
104405137  IFNG; interferon gamma [KO:K04687]
104405183  BMP2; bone morphogenetic protein 2 [KO:K21283]
104405223  [KO:K06067] [EC:3.5.1.98]
104405429  GREM2; gremlin-2 [KO:K23318]
104405537  ACVR2B; activin receptor type-2B [KO:K13596] [EC:2.7.11.30]
104405664  [KO:K04668]
104405918  BAMBI; LOW QUALITY PROTEIN: BMP and activin membrane-bound inhibitor homolog [KO:K10162]
104406465  EP300; LOW QUALITY PROTEIN: histone acetyltransferase p300 [KO:K04498] [EC:2.3.1.48]
104406774  SMAD1; mothers against decapentaplegic homolog 1 [KO:K04676]
104407191  ACVR1C; activin receptor type-1C [KO:K13568] [EC:2.7.11.30]
104407726  RBL1; retinoblastoma-like protein 1 [KO:K04681]
104407792  TGFBR1; TGF-beta receptor type-1 [KO:K04674] [EC:2.7.11.30]
104407820  SMAD4; mothers against decapentaplegic homolog 4 [KO:K04501]
104408030  [KO:K04371] [EC:2.7.11.24]
104408091  TGFB2; transforming growth factor beta-2 isoform X1 [KO:K13376]
104408161  [KO:K04678] [EC:2.3.2.26]
104408661  ACVR2A; activin receptor type-2A [KO:K04670] [EC:2.7.11.30]
104408663  [KO:K19558]
104408855  BMPR2; bone morphogenetic protein receptor type-2 [KO:K04671] [EC:2.7.11.30]
104409245  [KO:K04663]
104409301  TMEM53; transmembrane protein 53 [KO:K28359]
104409491  LRRC32; leucine-rich repeat-containing protein 32 [KO:K26316]
104409524  GREM1; gremlin-1 [KO:K23318]
104409735  [KO:K04661]
104409828  [KO:K04388] [EC:2.7.11.30]
104409964  BMPR1B; bone morphogenetic protein receptor type-1B [KO:K13578] [EC:2.7.11.30]
104410009  CHRD; chordin [KO:K04657]
104410023  SMAD3; mothers against decapentaplegic homolog 3 [KO:K23605]
104410070  FBN1; fibrillin-1 [KO:K06825]
104410084  SKP1; S-phase kinase-associated protein 1 [KO:K03094]
104410225  INHBA; inhibin beta A chain [KO:K04667]
104410450  [KO:K22689]
104410466  [KO:K14736]
104410543  SMAD9; mothers against decapentaplegic homolog 9 isoform X1 [KO:K16791]
104410659  DCN; decorin [KO:K04660]
104410928  BMP7; bone morphogenetic protein 7 [KO:K16621]
104411056  TGFB3; transforming growth factor beta-3 [KO:K13377]
104411480  INHBB; inhibin beta B chain [KO:K22687]
104411568  TGIF1; homeobox protein TGIF1 [KO:K19383]
104413354  NCOR1; nuclear receptor corepressor 1 isoform X1 [KO:K04650]
Compound
C14819  Fe3+
Reference
  Authors
Shi Y, Massague J.
  Title
Mechanisms of TGF-beta signaling from cell membrane to the nucleus.
  Journal
Cell 113:685-700 (2003)
DOI:10.1016/S0092-8674(03)00432-X
Reference
  Authors
Derynck R, Zhang YE.
  Title
Smad-dependent and Smad-independent pathways in TGF-beta family signalling.
  Journal
Nature 425:577-84 (2003)
DOI:10.1038/nature02006
Reference
  Authors
Massague J.
  Title
How cells read TGF-beta signals.
  Journal
Nat Rev Mol Cell Biol 1:169-78 (2000)
DOI:10.1038/35043051
Reference
  Authors
Siegel PM, Massague J.
  Title
Cytostatic and apoptotic actions of TGF-beta in homeostasis and cancer.
  Journal
Nat Rev Cancer 3:807-21 (2003)
DOI:10.1038/nrc1208
Reference
  Authors
Shimasaki S, Moore RK, Otsuka F, Erickson GF.
  Title
The bone morphogenetic protein system in mammalian reproduction.
  Journal
Endocr Rev 25:72-101 (2004)
DOI:10.1210/er.2003-0007
Reference
  Authors
De Robertis EM, Larrain J, Oelgeschlager M, Wessely O.
  Title
The establishment of Spemann's organizer and patterning of the vertebrate embryo.
  Journal
Nat Rev Genet 1:171-81 (2000)
DOI:10.1038/35042039
Reference
  Authors
Gumienny TL, Padgett RW.
  Title
The other side of TGF-beta superfamily signal regulation: thinking outside the cell.
  Journal
Trends Endocrinol Metab 13:295-9 (2002)
DOI:10.1016/S1043-2760(02)00615-X
Reference
  Authors
Hamada H, Meno C, Watanabe D, Saijoh Y.
  Title
Establishment of vertebrate left-right asymmetry.
  Journal
Nat Rev Genet 3:103-13 (2002)
DOI:10.1038/nrg732
Reference
  Authors
Chang H, Brown CW, Matzuk MM.
  Title
Genetic analysis of the mammalian transforming growth factor-beta superfamily.
  Journal
Endocr Rev 23:787-823 (2002)
DOI:10.1210/er.2002-0003
Reference
  Authors
Morita K, Chow KL, Ueno N.
  Title
Regulation of body length and male tail ray pattern formation of Caenorhabditis elegans by a member of TGF-beta family.
  Journal
Development 126:1337-47 (1999)
Reference
PMID:9847239
  Authors
Krishna S, Maduzia LL, Padgett RW.
  Title
Specificity of TGFbeta signaling is conferred by distinct type I receptors and their associated SMAD proteins in Caenorhabditis elegans.
  Journal
Development 126:251-60 (1999)
Reference
  Authors
Chen Y, Mironova E, Whitaker LL, Edwards L, Yost HJ, Ramsdell AF.
  Title
ALK4 functions as a receptor for multiple TGF beta-related ligands to regulate left-right axis determination and mesoderm induction in Xenopus.
  Journal
Dev Biol 268:280-94 (2004)
DOI:10.1016/j.ydbio.2003.12.035
Reference
  Authors
Onichtchouk D, Chen YG, Dosch R, Gawantka V, Delius H, Massague J, Niehrs C
  Title
Silencing of TGF-beta signalling by the pseudoreceptor BAMBI.
  Journal
Nature 401:480-5 (1999)
DOI:10.1038/46794
Reference
  Authors
Yan X, Lin Z, Chen F, Zhao X, Chen H, Ning Y, Chen YG
  Title
Human BAMBI cooperates with Smad7 to inhibit transforming growth factor-beta signaling.
  Journal
J Biol Chem 284:30097-104 (2009)
DOI:10.1074/jbc.M109.049304
Reference
PMID:8093006
  Authors
Hildebrand A, Romaris M, Rasmussen LM, Heinegard D, Twardzik DR, Border WA, Ruoslahti E
  Title
Interaction of the small interstitial proteoglycans biglycan, decorin and fibromodulin with transforming growth factor beta.
  Journal
Biochem J 302 ( Pt 2):527-34 (1994)
DOI:10.1042/bj3020527
Reference
  Authors
Soo C, Hu FY, Zhang X, Wang Y, Beanes SR, Lorenz HP, Hedrick MH, Mackool RJ, Plaas A, Kim SJ, Longaker MT, Freymiller E, Ting K
  Title
Differential expression of fibromodulin, a transforming growth factor-beta modulator, in fetal skin development and scarless repair.
  Journal
Am J Pathol 157:423-33 (2000)
DOI:10.1016/s0002-9440(10)64555-5
Reference
  Authors
Anderson GJ, Frazer DM
  Title
Iron metabolism meets signal transduction.
  Journal
Nat Genet 38:503-4 (2006)
DOI:10.1038/ng0506-503
Reference
  Authors
Canali S, Core AB, Zumbrennen-Bullough KB, Merkulova M, Wang CY, Schneyer AL, Pietrangelo A, Babitt JL
  Title
Activin B Induces Noncanonical SMAD1/5/8 Signaling via BMP Type I Receptors in Hepatocytes: Evidence for a Role in Hepcidin Induction by Inflammation in Male Mice.
  Journal
Endocrinology 157:1146-62 (2016)
DOI:10.1210/en.2015-1747
Reference
  Authors
Ganz T, Nemeth E
  Title
Iron homeostasis in host defence and inflammation.
  Journal
Nat Rev Immunol 15:500-10 (2015)
DOI:10.1038/nri3863
Reference
  Authors
Babitt JL, Zhang Y, Samad TA, Xia Y, Tang J, Campagna JA, Schneyer AL, Woolf CJ, Lin HY
  Title
Repulsive guidance molecule (RGMa), a DRAGON homologue, is a bone morphogenetic protein co-receptor.
  Journal
J Biol Chem 280:29820-7 (2005)
DOI:10.1074/jbc.M503511200
Reference
  Authors
Samad TA, Rebbapragada A, Bell E, Zhang Y, Sidis Y, Jeong SJ, Campagna JA, Perusini S, Fabrizio DA, Schneyer AL, Lin HY, Brivanlou AH, Attisano L, Woolf CJ
  Title
DRAGON, a bone morphogenetic protein co-receptor.
  Journal
J Biol Chem 280:14122-9 (2005)
DOI:10.1074/jbc.M410034200
Reference
  Authors
Vogt AS, Arsiwala T, Mohsen M, Vogel M, Manolova V, Bachmann MF
  Title
On Iron Metabolism and Its Regulation.
  Journal
Int J Mol Sci 22:ijms22094591 (2021)
DOI:10.3390/ijms22094591
Reference
  Authors
Ikushima H, Miyazono K
  Title
TGFbeta signalling: a complex web in cancer progression.
  Journal
Nat Rev Cancer 10:415-24 (2010)
DOI:10.1038/nrc2853
Reference
  Authors
Wu M, Wu S, Chen W, Li YP
  Title
The roles and regulatory mechanisms of TGF-beta and BMP signaling in bone and cartilage development, homeostasis and disease.
  Journal
Cell Res 34:101-123 (2024)
DOI:10.1038/s41422-023-00918-9
Related
pathway
nnt04010  MAPK signaling pathway
nnt04110  Cell cycle
nnt04120  Ubiquitin mediated proteolysis
nnt04210  Apoptosis
KO pathway
ko04350   

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