KEGG   PATHWAY: amus03040
Entry
amus03040                   Pathway                                
Name
Spliceosome - Akanthomyces muscarius
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
amus03040  Spliceosome
amus03040

Other DBs
GO: 0005681
Organism
Akanthomyces muscarius [GN:amus]
Gene
LMH87_005516  hypothetical protein [KO:K12811] [EC:5.6.2.7]
LMH87_002508  hypothetical protein [KO:K12812] [EC:5.6.2.7]
LMH87_000076  hypothetical protein [KO:K12813] [EC:5.6.2.6]
LMH87_005017  hypothetical protein [KO:K12815] [EC:5.6.2.6]
LMH87_005382  hypothetical protein [KO:K12816]
LMH87_003490  hypothetical protein [KO:K12817]
LMH87_001845  hypothetical protein [KO:K12819]
LMH87_000427  hypothetical protein [KO:K12820] [EC:5.6.2.6]
LMH87_005517  hypothetical protein [KO:K12820] [EC:5.6.2.6]
LMH87_005054  hypothetical protein [KO:K11086]
LMH87_003710  hypothetical protein [KO:K11087]
LMH87_002451  hypothetical protein [KO:K11096]
LMH87_007301  hypothetical protein [KO:K11088]
LMH87_008768  uncharacterized protein [KO:K11097]
LMH87_004844  hypothetical protein [KO:K11098]
LMH87_006490  hypothetical protein [KO:K11099]
LMH87_003628  hypothetical protein [KO:K11093]
LMH87_004808  hypothetical protein [KO:K11095]
LMH87_004092  hypothetical protein [KO:K12821]
LMH87_010798  hypothetical protein [KO:K12823] [EC:5.6.2.7]
LMH87_006584  hypothetical protein [KO:K11092]
LMH87_005886  hypothetical protein [KO:K11094]
LMH87_001801  hypothetical protein [KO:K12825]
LMH87_011519  hypothetical protein [KO:K12826]
LMH87_002964  hypothetical protein [KO:K12827]
LMH87_011983  hypothetical protein [KO:K12829]
LMH87_003541  hypothetical protein [KO:K12830]
LMH87_004270  hypothetical protein [KO:K12831]
LMH87_002094  hypothetical protein [KO:K12832]
LMH87_005131  hypothetical protein [KO:K12833]
LMH87_003763  hypothetical protein [KO:K12834]
LMH87_003814  hypothetical protein [KO:K12836]
LMH87_003729  hypothetical protein [KO:K12837]
LMH87_011426  hypothetical protein [KO:K12839]
LMH87_007801  uncharacterized protein [KO:K12840]
LMH87_009064  uncharacterized protein [KO:K12842]
LMH87_003716  hypothetical protein [KO:K12621]
LMH87_010666  hypothetical protein [KO:K12622]
LMH87_006935  hypothetical protein [KO:K12623]
LMH87_002526  hypothetical protein [KO:K12624]
LMH87_005590  hypothetical protein [KO:K12625]
LMH87_001931  hypothetical protein [KO:K12626]
LMH87_005216  hypothetical protein [KO:K12627]
LMH87_009787  hypothetical protein [KO:K12843]
LMH87_005206  hypothetical protein [KO:K12662]
LMH87_006089  hypothetical protein [KO:K09567] [EC:5.2.1.8]
LMH87_012098  hypothetical protein [KO:K12844]
LMH87_000541  hypothetical protein [KO:K12845]
LMH87_002749  hypothetical protein [KO:K12846]
LMH87_002468  hypothetical protein [KO:K12847]
LMH87_009648  hypothetical protein [KO:K11984]
LMH87_011210  hypothetical protein [KO:K12849]
LMH87_006822  hypothetical protein [KO:K12852]
LMH87_011493  hypothetical protein [KO:K12854] [EC:5.6.2.6]
LMH87_000572  hypothetical protein [KO:K12855]
LMH87_011943  hypothetical protein [KO:K12857]
LMH87_004956  hypothetical protein [KO:K12858] [EC:5.6.2.7]
LMH87_008730  uncharacterized protein [KO:K12859]
LMH87_003133  hypothetical protein [KO:K10599] [EC:2.3.2.27]
LMH87_006314  hypothetical protein [KO:K12860]
LMH87_011793  hypothetical protein [KO:K12861]
LMH87_012067  hypothetical protein [KO:K12862]
LMH87_009872  hypothetical protein [KO:K12863]
LMH87_012016  hypothetical protein [KO:K12864]
LMH87_006048  hypothetical protein [KO:K03283]
LMH87_010154  hypothetical protein [KO:K03283]
LMH87_002600  hypothetical protein [KO:K06063]
LMH87_000633  hypothetical protein [KO:K12867]
LMH87_003756  hypothetical protein [KO:K12868]
LMH87_012097  hypothetical protein [KO:K12869]
LMH87_011832  hypothetical protein [KO:K12870]
LMH87_002291  hypothetical protein [KO:K12733] [EC:5.2.1.8]
LMH87_010459  hypothetical protein [KO:K12871]
LMH87_001660  hypothetical protein [KO:K12872]
LMH87_008870  uncharacterized protein [KO:K12873]
LMH87_009743  hypothetical protein [KO:K12874]
LMH87_002963  hypothetical protein [KO:K13025] [EC:5.6.2.7]
LMH87_006858  hypothetical protein [KO:K12876]
LMH87_001003  hypothetical protein [KO:K12877]
LMH87_009742  hypothetical protein [KO:K12878]
LMH87_010031  hypothetical protein [KO:K12879]
LMH87_012105  hypothetical protein [KO:K12880]
LMH87_000281  hypothetical protein [KO:K12881]
LMH87_004973  hypothetical protein [KO:K12881]
LMH87_004296  hypothetical protein [KO:K12882]
LMH87_009851  hypothetical protein [KO:K12883]
Reference
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   
LinkDB

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