KEGG   PATHWAY: avit04814
Entry
avit04814                   Pathway                                
Name
Motor proteins - Apaloderma vittatum (bar-tailed trogon)
Class
Cellular Processes; Cell motility
Pathway map
avit04814  Motor proteins
avit04814

Organism
Apaloderma vittatum (bar-tailed trogon) [GN:avit]
Gene
104273781  DYNC1H1; cytoplasmic dynein 1 heavy chain 1 [KO:K10413]
104270027  DYNC2H1; cytoplasmic dynein 2 heavy chain 1 [KO:K10414]
104279464  cytoplasmic dynein 1 intermediate chain 2 [KO:K10415]
104268850  cytoplasmic dynein 1 intermediate chain 1-like [KO:K10415]
104268640  DYNC1LI1; cytoplasmic dynein 1 light intermediate chain 1 [KO:K10416]
104275925  DYNC1LI2; cytoplasmic dynein 1 light intermediate chain 2 [KO:K10416]
104268459  DYNC2LI1; cytoplasmic dynein 2 light intermediate chain 1 [KO:K10417]
104272210  dynein light chain 1, cytoplasmic-like [KO:K10418]
104281171  DYNLL2; dynein light chain 2, cytoplasmic [KO:K10418]
104268348  dynein light chain roadblock-type 1 [KO:K10419]
104270563  DYNLT1; dynein light chain Tctex-type 1 [KO:K10420]
104272818  DYNLT3; dynein light chain Tctex-type 3 [KO:K10420]
104268831  TCTE3; tctex1 domain-containing protein 3 [KO:K25419]
104281032  TCTEX1D4; tctex1 domain-containing protein 4 [KO:K25420]
104278303  TCTEX1D1; tctex1 domain-containing protein 1 [KO:K25421]
104279477  LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like [KO:K10408]
104280553  DNAH3; dynein heavy chain 3, axonemal [KO:K10408]
104273062  DNAH1; LOW QUALITY PROTEIN: dynein heavy chain 1, axonemal [KO:K10408]
104277253  LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal-like [KO:K10408]
104274054  dynein heavy chain 9, axonemal-like [KO:K10408]
104274464  DNAH10; dynein heavy chain 10, axonemal [KO:K10408]
104267093  DNAH12; dynein heavy chain 12, axonemal [KO:K10408]
104279354  WDR63; WD repeat-containing protein 63 [KO:K24722]
104273949  WDR78; LOW QUALITY PROTEIN: WD repeat-containing protein 78 [KO:K24723]
104277576  DNALI1; axonemal dynein light intermediate polypeptide 1 [KO:K10410]
104278756  DNAL1; dynein light chain 1, axonemal isoform X1 [KO:K10411]
104272647  DNAL4; dynein light chain 4, axonemal [KO:K10412]
104267864  DCTN3; dynactin subunit 3 [KO:K10425]
104276355  DCTN4; dynactin subunit 4 isoform X1 [KO:K10426]
104271068  DCTN5; dynactin subunit 5 isoform X1 [KO:K10427]
104268793  DCTN6; dynactin subunit 6 [KO:K10428]
104274088  ACTR1B; beta-centractin [KO:K16575]
104267996  ACTR10; actin-related protein 10 [KO:K16576]
104268255  CAPZA1; F-actin-capping protein subunit alpha-1 [KO:K10364]
104277223  CAPZA2; F-actin-capping protein subunit alpha-2 [KO:K10364]
104275754  CAPZB; F-actin-capping protein subunit beta [KO:K10365]
104271387  CCDC64; bicaudal D-related protein 1 [KO:K16756]
104268012  protein Hook homolog 3-like [KO:K16536]
104270863  TUBAL3; LOW QUALITY PROTEIN: tubulin alpha chain-like 3 [KO:K07374]
104269389  tubulin alpha-3 chain [KO:K07374]
104271768  tubulin alpha-8 chain [KO:K07374]
104268865  tubulin alpha-8 chain [KO:K07374]
104269821  tubulin beta chain isoform X1 [KO:K07375]
104268219  tubulin beta-5 chain [KO:K07375]
104267217  tubulin beta chain [KO:K07375]
104278060  LOW QUALITY PROTEIN: tubulin beta-6 chain-like [KO:K07375]
104277401  LOW QUALITY PROTEIN: tubulin gamma-1 chain-like [KO:K10389]
104278863  TUBD1; tubulin delta chain isoform X1 [KO:K10390]
104275619  TUBE1; tubulin epsilon chain [KO:K10391]
104277232  kinesin heavy chain isoform 5C [KO:K10396]
104274144  KIF5B; kinesin-1 heavy chain [KO:K10396]
104276119  kinesin light chain 1-like [KO:K10407]
104277114  KLC1; kinesin light chain 1 [KO:K10407]
104281160  KIF3A; kinesin-like protein KIF3A [KO:K10394]
104273164  KIF3B; kinesin-like protein KIF3B isoform X1 [KO:K20196]
104278820  KIFAP3; LOW QUALITY PROTEIN: kinesin-associated protein 3 [KO:K25388]
104279537  KIF17; kinesin-like protein KIF17 [KO:K20198]
104272893  KIF1A; kinesin-like protein KIF1A isoform X1 [KO:K10392]
104277434  KIF1B; LOW QUALITY PROTEIN: kinesin-like protein KIF1B [KO:K10392]
104272925  KIF13A; kinesin-like protein KIF13A [KO:K17914]
104277296  KIF16B; kinesin-like protein KIF16B [KO:K17916]
104281310  STARD9; stAR-related lipid transfer protein 9 [KO:K16491]
104280169  KIF4A; chromosome-associated kinesin KIF4A [KO:K10395]
104280138  KIF21A; kinesin-like protein KIF21A [KO:K24185]
104275893  KIF27; kinesin-like protein KIF27 [KO:K24186]
104278080  KIF11; kinesin-like protein KIF11 [KO:K10398]
104267928  KIF20A; kinesin-like protein KIF20A isoform X1 [KO:K10402]
104279357  KIF20B; LOW QUALITY PROTEIN: kinesin-like protein KIF20B [KO:K10402]
104276766  kinesin-like protein KIF20A [KO:K10402]
104272878  CENPE; centromere-associated protein E [KO:K11498]
104277020  KIF18A; kinesin-like protein KIF18A [KO:K10401]
104270093  KIF19; LOW QUALITY PROTEIN: kinesin-like protein KIF19 [KO:K26157]
104272839  KIF9; kinesin-like protein KIF9 [KO:K10397]
104271109  KIF26A; kinesin-like protein KIF26A [KO:K10404]
104278217  KIF26B; kinesin-like protein KIF26B [KO:K10404]
104280963  KIF15; kinesin-like protein KIF15 [KO:K10400]
104275396  KIF24; kinesin-like protein KIF24 [KO:K10393]
104272004  KIF2A; kinesin-like protein KIF2A [KO:K10393]
104273180  KIF2C; kinesin-like protein KIF2C [KO:K10393]
104271183  KIF25; kinesin-like protein KIF25 [KO:K18627]
104281136  MYO1H; unconventional myosin-Ih [KO:K10356]
104277633  MYO1C; unconventional myosin-Ic isoform X1 [KO:K10356]
104274082  unconventional myosin-Ie [KO:K10356]
104278436  MYO1B; unconventional myosin-Ib [KO:K10356]
104267100  myosin-IIIa-like [KO:K08834] [EC:2.7.11.1]
104280078  MYO3B; myosin-IIIb [KO:K08834] [EC:2.7.11.1]
104270090  MYO5A; unconventional myosin-Va [KO:K10357]
104269549  MYO5C; unconventional myosin-Vc [KO:K10357]
104280038  LOW QUALITY PROTEIN: unconventional myosin-Vb-like [KO:K10357]
104272491  MYO6; unconventional myosin-VI [KO:K10358]
104272430  MYO7A; unconventional myosin-VIIa [KO:K10359]
104269945  MYO7B; unconventional myosin-VIIb [KO:K21868]
104270552  MYO9A; unconventional myosin-IXa [KO:K10360]
104272520  MYO9B; LOW QUALITY PROTEIN: unconventional myosin-IXb [KO:K10360]
104268578  unconventional myosin-X-like [KO:K12559]
104278468  LOW QUALITY PROTEIN: unconventional myosin-X-like [KO:K12559]
104273184  MYO19; unconventional myosin-XIX [KO:K25838]
104271331  LOW QUALITY PROTEIN: myosin-7B-like [KO:K24220]
104267059  myosin-6-like [KO:K24220]
104274664  myosin-13 [KO:K24220]
104270219  MYH10; LOW QUALITY PROTEIN: myosin-10 [KO:K10352]
104279581  MYH11; myosin-11 isoform X1 [KO:K10352]
104277921  MYH9; myosin-9 isoform X1 [KO:K10352]
104281242  MYL1; myosin light chain 1/3, skeletal muscle isoform isoform X1 [KO:K05738]
104274584  myosin light chain 1, cardiac muscle [KO:K12749]
104272512  MYL4; myosin light chain 4 [KO:K12750]
104270672  myosin regulatory light chain 2A, cardiac muscle isoform [KO:K10351]
104274171  MYL9; myosin regulatory light polypeptide 9 isoform X1 [KO:K12755]
104272097  myosin regulatory light chain 2B, cardiac muscle isoform [KO:K12756]
104269558  myosin regulatory light chain 2, smooth muscle minor isoform-like isoform X1 [KO:K12757]
104276248  myosin regulatory light chain 2, smooth muscle minor isoform isoform X1 [KO:K12757]
104268728  actin, alpha skeletal muscle isoform X1 [KO:K10354]
104268890  ACTA2; actin, aortic smooth muscle isoform X1 [KO:K12313]
104279614  actin, alpha cardiac muscle 1 [KO:K12314]
104268866  actin, cytoplasmic 1 isoform X1 [KO:K05692]
104269571  actin, cytoplasmic type 5 isoform X1 [KO:K05692]
104280697  TNNC1; troponin C, slow skeletal and cardiac muscles [KO:K05865]
104274644  troponin I, slow skeletal muscle [KO:K10371]
104279564  TNNI2; troponin I, fast skeletal muscle [KO:K12043]
104269698  TNNT3; troponin T, fast skeletal muscle [KO:K12046]
104271841  TNNT2; troponin T, cardiac muscle [KO:K12045]
104277895  tropomyosin alpha-3 chain-like [KO:K10373]
104277273  tropomyosin alpha-4 chain [KO:K10374]
104279908  TPM3; tropomyosin alpha-3 chain isoform X1 [KO:K09290]
104267704  tropomyosin alpha-1 chain-like [KO:K10375]
Reference
  Authors
Hirokawa N, Niwa S, Tanaka Y
  Title
Molecular motors in neurons: transport mechanisms and roles in brain function, development, and disease.
  Journal
Neuron 68:610-38 (2010)
DOI:10.1016/j.neuron.2010.09.039
Reference
PMID:25470043 (PDB:4RH7)
  Authors
Schmidt H, Zalyte R, Urnavicius L, Carter AP
  Title
Structure of human cytoplasmic dynein-2 primed for its power stroke.
  Journal
Nature 518:435-438 (2015)
DOI:10.1038/nature14023
Reference
PMID:22398446 (PDB:3VKG 3VKH)
  Authors
Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G
  Title
The 2.8 A crystal structure of the dynein motor domain.
  Journal
Nature 484:345-50 (2012)
DOI:10.1038/nature10955
Reference
PMID:22997337 (PDB:3J1T 3J1U)
  Authors
Redwine WB, Hernandez-Lopez R, Zou S, Huang J, Reck-Peterson SL, Leschziner AE
  Title
Structural basis for microtubule binding and release by dynein.
  Journal
Science 337:1532-1536 (2012)
DOI:10.1126/science.1224151
Reference
  Authors
Gibbs KL, Greensmith L, Schiavo G
  Title
Regulation of Axonal Transport by Protein Kinases.
  Journal
Trends Biochem Sci 40:597-610 (2015)
DOI:10.1016/j.tibs.2015.08.003
Reference
PMID:28602352 (PDB:5NUG 5NVS 5NVU 5NW4)
  Authors
Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP
  Title
Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated.
  Journal
Cell 169:1303-1314.e18 (2017)
DOI:10.1016/j.cell.2017.05.025
Reference
PMID:25814576 (PDB:5ADX 5AFR 5AFU)
  Authors
Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP
  Title
The structure of the dynactin complex and its interaction with dynein.
  Journal
Science 347:1441-1446 (2015)
DOI:10.1126/science.aaa4080
Reference
PMID:29420470 (PDB:5OWO 6F1T 6F1U 6F1V 6F1Y 6F1Z 6F38 6F3A)
  Authors
Urnavicius L, Lau CK, Elshenawy MM, Morales-Rios E, Motz C, Yildiz A, Carter AP
  Title
Cryo-EM shows how dynactin recruits two dyneins for faster movement.
  Journal
Nature 554:202-206 (2018)
DOI:10.1038/nature25462
Reference
  Authors
Reck-Peterson SL, Redwine WB, Vale RD, Carter AP
  Title
The cytoplasmic dynein transport machinery and its many cargoes.
  Journal
Nat Rev Mol Cell Biol 19:382-398 (2018)
DOI:10.1038/s41580-018-0004-3
Reference
PMID:23434508 (PDB:3J2U)
  Authors
Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H
  Title
Structural model for tubulin recognition and deformation by kinesin-13 microtubule depolymerases.
  Journal
Cell Rep 3:759-68 (2013)
DOI:10.1016/j.celrep.2013.01.030
Reference
PMID:10338210 (PDB:1B7T)
  Authors
Houdusse A, Kalabokis VN, Himmel D, Szent-Gyorgyi AG, Cohen C
  Title
Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.
  Journal
Cell 97:459-70 (1999)
DOI:10.1016/s0092-8674(00)80756-4
Reference
PMID:9428521 (PDB:3KIN)
  Authors
Kozielski F, Sack S, Marx A, Thormahlen M, Schonbrunn E, Biou V, Thompson A, Mandelkow EM, Mandelkow E
  Title
The crystal structure of dimeric kinesin and implications for microtubule-dependent motility.
  Journal
Cell 91:985-94 (1997)
DOI:10.1016/s0092-8674(00)80489-4
Reference
PMID:8316857 (PDB:2MYS)
  Authors
Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM
  Title
Three-dimensional structure of myosin subfragment-1: a molecular motor.
  Journal
Science 261:50-8 (1993)
DOI:10.1126/science.8316857
Reference
  Authors
Parker D, Bryant Z, Delp SL
  Title
Coarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.
  Journal
Cell Mol Bioeng 2:366-374 (2009)
DOI:10.1007/s12195-009-0084-4
Reference
  Authors
Dominguez R, Holmes KC
  Title
Actin structure and function.
  Journal
Annu Rev Biophys 40:169-86 (2011)
DOI:10.1146/annurev-biophys-042910-155359
Reference
PMID:31919429 (PDB:6KN7 6KN8)
  Authors
Yamada Y, Namba K, Fujii T
  Title
Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
  Journal
Nat Commun 11:153 (2020)
DOI:10.1038/s41467-019-14008-1
Reference
  Authors
Kruppa AJ, Buss F
  Title
Motor proteins at the mitochondria-cytoskeleton interface.
  Journal
J Cell Sci 134:239092 (2021)
DOI:10.1242/jcs.226084
KO pathway
ko04814   
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