KEGG   PATHWAY: cgib03022
Entry
cgib03022                   Pathway                                
Name
Basal transcription factors - Carassius gibelio (silver crucian carp)
Class
Genetic Information Processing; Transcription
Pathway map
cgib03022  Basal transcription factors
cgib03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Carassius gibelio (silver crucian carp) [GN:cgib]
Gene
127984186  transcription initiation factor IIA subunit 1-like [KO:K03122]
127938366  transcription initiation factor IIA subunit 1-like [KO:K03122]
127962115  transcription initiation factor IIA subunit 2-like [KO:K03123]
128016996  transcription initiation factor IIA subunit 2 [KO:K03123]
127951091  transcription initiation factor IIB-like [KO:K03124]
128027677  transcription initiation factor IIB [KO:K03124]
127970377  TATA-box-binding protein [KO:K03120]
127944968  TATA box-binding protein-like 1 [KO:K03120]
127976463  TATA box-binding protein-like 2 isoform X1 [KO:K03120]
128026225  TATA-box-binding protein-like [KO:K03120]
128011873  TATA box-binding protein-like 1 [KO:K03120]
128005004  transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
127974530  transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
127971366  transcription initiation factor TFIID subunit 7-like isoform X1 [KO:K03132]
128027472  transcription initiation factor TFIID subunit 7-like [KO:K03132]
127945141  transcription initiation factor TFIID subunit 8 [KO:K14649]
128011864  transcription initiation factor TFIID subunit 8-like [KO:K14649]
127972737  transcription initiation factor TFIID subunit 3-like [KO:K14650]
127956520  transcription initiation factor TFIID subunit 3-like [KO:K14650]
127963672  transcription initiation factor TFIID subunit 10 isoform X1 [KO:K03134]
128018624  transcription initiation factor TFIID subunit 10-like [KO:K03134]
127949091  transcription initiation factor TFIID subunit 5-like [KO:K03130]
128017465  transcription initiation factor TFIID subunit 5-like isoform X1 [KO:K03130]
128020058  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 [KO:K03130]
127983587  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
127934168  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
127946702  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
127968398  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
127977710  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
128014013  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
128022390  transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
127974400  transcription initiation factor TFIID subunit 12-like [KO:K03126]
128030517  transcription initiation factor TFIID subunit 12-like [KO:K03126]
127961415  TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
127988988  transcription initiation factor TFIID subunit 6 [KO:K03131]
127941732  transcription initiation factor TFIID subunit 9-like [KO:K14535]
127985756  transcription initiation factor TFIID subunit 9-like isoform X1 [KO:K14535]
127945094  transcription initiation factor TFIID subunit 11-like [KO:K03135]
128011544  transcription initiation factor TFIID subunit 11-like [KO:K03135]
127944759  transcription initiation factor TFIID subunit 13-like [KO:K03127]
128012058  transcription initiation factor TFIID subunit 13 [KO:K03127]
127965214  general transcription factor IIE subunit 1 [KO:K03136]
128019835  general transcription factor IIE subunit 1-like [KO:K03136]
127957210  general transcription factor IIE subunit 2-like [KO:K03137]
127949362  general transcription factor IIE subunit 2-like [KO:K03137]
127950642  general transcription factor IIF subunit 1-like isoform X1 [KO:K03138]
127965039  general transcription factor IIF subunit 2b [KO:K03139] [EC:5.6.2.-]
127948914  general transcription factor IIF subunit 2-like isoform X1 [KO:K03139] [EC:5.6.2.-]
128016110  general transcription factor IIF subunit 2-like isoform X1 [KO:K03139] [EC:5.6.2.-]
127947461  general transcription factor IIH subunit 1-like [KO:K03141]
128014229  general transcription factor IIH subunit 1 isoform X1 [KO:K03141]
127958043  general transcription factor IIH subunit 2 [KO:K03142]
127957227  general transcription factor IIH subunit 3 [KO:K03143]
127979005  general transcription factor IIH subunit 4-like [KO:K03144]
127935641  general transcription factor IIH subunit 4-like [KO:K03144]
127960162  general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
128016161  general transcription and DNA repair factor IIH helicase subunit XPB-like isoform X1 [KO:K10843] [EC:5.6.2.4]
127972910  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
128029218  general transcription and DNA repair factor IIH helicase subunit XPD-like [KO:K10844] [EC:5.6.2.3]
127983790  general transcription factor IIH subunit 5 [KO:K10845]
127938128  general transcription factor IIH subunit 5 [KO:K10845]
127938383  general transcription factor IIH subunit 5 [KO:K10845]
127957796  cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
127998537  cyclin-dependent kinase 7-like [KO:K02202] [EC:2.7.11.22 2.7.11.23]
127970218  CDK-activating kinase assembly factor MAT1-like isoform X1 [KO:K10842]
128026109  CDK-activating kinase assembly factor MAT1-like [KO:K10842]
127957783  cyclin-H-like [KO:K06634]
127999398  cyclin-H-like [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
cgib03020  RNA polymerase
cgib03420  Nucleotide excision repair
KO pathway
ko03022   
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