KEGG   PATHWAY: csav00270
Entry
csav00270                   Pathway                                
Name
Cysteine and methionine metabolism - Cannabis sativa (hemp)
Description
Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].
Class
Metabolism; Amino acid metabolism
Pathway map
csav00270  Cysteine and methionine metabolism
csav00270

Module
csav_M00021  Cysteine biosynthesis, serine => cysteine [PATH:csav00270]
csav_M00034  Methionine salvage pathway [PATH:csav00270]
csav_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:csav00270]
Other DBs
GO: 0006534 0006555
Organism
Cannabis sativa (hemp) [GN:csav]
Gene
115702624  serine acetyltransferase 2 [KO:K00640] [EC:2.3.1.30]
115704710  serine acetyltransferase 1, chloroplastic [KO:K00640] [EC:2.3.1.30]
115705017  serine acetyltransferase 2-like [KO:K00640] [EC:2.3.1.30]
115705662  serine acetyltransferase 5-like [KO:K00640] [EC:2.3.1.30]
115706332  serine acetyltransferase 5-like [KO:K00640] [EC:2.3.1.30]
115706566  LOW QUALITY PROTEIN: serine acetyltransferase 5-like [KO:K00640] [EC:2.3.1.30]
115725485  serine acetyltransferase 1, chloroplastic [KO:K00640] [EC:2.3.1.30]
115719033  cysteine synthase [KO:K01738] [EC:2.5.1.47]
115721776  S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent), chloroplastic [KO:K01738] [EC:2.5.1.47]
115721064  cysteine synthase isoform X1 [KO:K01738] [EC:2.5.1.47]
115719688  cysteine synthase [KO:K01738] [EC:2.5.1.47]
115719689  cysteine synthase [KO:K01738] [EC:2.5.1.47]
115719520  cysteine synthase [KO:K01738] [EC:2.5.1.47]
115708041  cysteine synthase [KO:K01738] [EC:2.5.1.47]
115695912  cysteine synthase 2 [KO:K01738] [EC:2.5.1.47]
115707895  bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial [KO:K13034] [EC:2.5.1.47 4.4.1.9]
115700737  cystathionine beta-lyase, chloroplastic [KO:K01760] [EC:4.4.1.13]
115712805  homocysteine S-methyltransferase 1 [KO:K00547] [EC:2.1.1.10]
115703995  homocysteine S-methyltransferase 2 [KO:K00547] [EC:2.1.1.10]
115723464  homocysteine S-methyltransferase 2 [KO:K00547] [EC:2.1.1.10]
115718912  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 2 [KO:K00549] [EC:2.1.1.14]
115722523  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1 [KO:K00549] [EC:2.1.1.14]
115719259  S-adenosylmethionine synthase 1 [KO:K00789] [EC:2.5.1.6]
115711343  S-adenosylmethionine synthase 3 [KO:K00789] [EC:2.5.1.6]
115711364  S-adenosylmethionine synthase 1 [KO:K00789] [EC:2.5.1.6]
115721913  S-adenosylmethionine decarboxylase proenzyme 4 [KO:K01611] [EC:4.1.1.50]
115699586  S-adenosylmethionine decarboxylase proenzyme [KO:K01611] [EC:4.1.1.50]
115725611  S-adenosylmethionine decarboxylase proenzyme [KO:K01611] [EC:4.1.1.50]
115712839  spermidine synthase 1 [KO:K00797] [EC:2.5.1.16]
115716589  spermine synthase isoform X1 [KO:K00797] [EC:2.5.1.16]
115720795  nicotianamine synthase-like [KO:K05953] [EC:2.5.1.43]
115720829  nicotianamine synthase-like [KO:K05953] [EC:2.5.1.43]
115722005  nicotianamine synthase [KO:K05953] [EC:2.5.1.43]
115721204  nicotianamine synthase [KO:K05953] [EC:2.5.1.43]
115718660  nicotianamine synthase [KO:K05953] [EC:2.5.1.43]
115718661  nicotianamine synthase-like [KO:K05953] [EC:2.5.1.43]
115704327  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [KO:K01244] [EC:3.2.2.16]
115702983  LOW QUALITY PROTEIN: methylthioribose kinase-like [KO:K00899] [EC:2.7.1.100]
115703014  methylthioribose kinase [KO:K00899] [EC:2.7.1.100]
115706479  methylthioribose-1-phosphate isomerase [KO:K08963] [EC:5.3.1.23]
115706293  probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [KO:K16054] [EC:4.2.1.109 3.1.3.77]
115722194  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [KO:K08967] [EC:1.13.11.53 1.13.11.54]
115721731  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 [KO:K08967] [EC:1.13.11.53 1.13.11.54]
115713933  uncharacterized protein LOC115713933 [KO:K23977] [EC:2.6.1.117]
115699415  uncharacterized protein LOC115699415 isoform X1 [KO:K00815] [EC:2.6.1.5]
115699416  tyrosine aminotransferase [KO:K00815] [EC:2.6.1.5]
115698185  probable aminotransferase TAT2 [KO:K00815] [EC:2.6.1.5]
115698780  tyrosine aminotransferase-like [KO:K00815] [EC:2.6.1.5]
115697430  aromatic aminotransferase ISS1 [KO:K00837] [EC:2.6.1.-]
115699125  aromatic aminotransferase ISS1 [KO:K00837] [EC:2.6.1.-]
115717307  methionine gamma-lyase [KO:K01761] [EC:4.4.1.11]
115699482  putative DNA (cytosine-5)-methyltransferase CMT1 [KO:K00558] [EC:2.1.1.37]
115704263  LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase CMT2-like [KO:K00558] [EC:2.1.1.37]
115712625  DNA (cytosine-5)-methyltransferase 1 [KO:K00558] [EC:2.1.1.37]
115720751  uncharacterized protein LOC115720751 [KO:K17398] [EC:2.1.1.37]
115722395  adenosylhomocysteinase 1 [KO:K01251] [EC:3.13.2.1]
115717044  1-aminocyclopropane-1-carboxylate synthase [KO:K20772] [EC:4.4.1.14]
115704849  1-aminocyclopropane-1-carboxylate synthase [KO:K20772] [EC:4.4.1.14]
115716540  1-aminocyclopropane-1-carboxylate synthase 9-like [KO:K01762] [EC:4.4.1.14]
115704963  LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate synthase 7-like [KO:K01762] [EC:4.4.1.14]
115696400  1-aminocyclopropane-1-carboxylate synthase 9-like [KO:K01762] [EC:4.4.1.14]
115712396  1-aminocyclopropane-1-carboxylate synthase 3 [KO:K01762] [EC:4.4.1.14]
115699408  1-aminocyclopropane-1-carboxylate oxidase 5 [KO:K05933] [EC:1.14.17.4]
115699412  1-aminocyclopropane-1-carboxylate oxidase [KO:K05933] [EC:1.14.17.4]
115702109  LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase 1-like [KO:K05933] [EC:1.14.17.4]
115704991  1-aminocyclopropane-1-carboxylate oxidase 1-like [KO:K05933] [EC:1.14.17.4]
115707397  1-aminocyclopropane-1-carboxylate oxidase [KO:K05933] [EC:1.14.17.4]
115700829  aspartokinase 2, chloroplastic isoform X1 [KO:K00928] [EC:2.7.2.4]
115715268  aspartokinase 1, chloroplastic [KO:K00928] [EC:2.7.2.4]
115713163  bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [KO:K12524] [EC:2.7.2.4 1.1.1.3]
115721821  uncharacterized protein LOC115721821 [KO:K00133] [EC:1.2.1.11]
115698867  cystathionine gamma-synthase 1, chloroplastic [KO:K01739] [EC:2.5.1.48]
115716886  branched-chain amino acid aminotransferase 2, chloroplastic [KO:K00826] [EC:2.6.1.42]
115716900  branched-chain amino acid aminotransferase 2, chloroplastic-like [KO:K00826] [EC:2.6.1.42]
115717084  branched-chain-amino-acid aminotransferase 2, chloroplastic [KO:K00826] [EC:2.6.1.42]
115712735  branched-chain amino acid aminotransferase 1, mitochondrial isoform X1 [KO:K00826] [EC:2.6.1.42]
115716705  LOW QUALITY PROTEIN: branched-chain amino acid aminotransferase 1, mitochondrial-like [KO:K00826] [EC:2.6.1.42]
115715790  branched-chain amino acid aminotransferase 1, mitochondrial [KO:K00826] [EC:2.6.1.42]
115712225  branched-chain amino acid aminotransferase 2, chloroplastic [KO:K00826] [EC:2.6.1.42]
115699313  alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
115697330  alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
115716234  glutamate--cysteine ligase, chloroplastic [KO:K01919] [EC:6.3.2.2]
115719440  glutathione synthetase, chloroplastic [KO:K21456] [EC:6.3.2.3]
115697796  aspartate aminotransferase, cytoplasmic isoform X1 [KO:K14454] [EC:2.6.1.1]
115697874  aspartate aminotransferase, cytoplasmic isozyme 1 isoform X1 [KO:K14454] [EC:2.6.1.1]
115697888  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
115699642  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
115696908  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
115699837  aspartate aminotransferase P2, mitochondrial [KO:K00811] [EC:2.6.1.1]
115709268  thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial [KO:K01011] [EC:2.8.1.1 2.8.1.2]
115716905  L-lactate dehydrogenase B [KO:K00016] [EC:1.1.1.27]
115716348  L-lactate dehydrogenase B [KO:K00016] [EC:1.1.1.27]
115710211  putative D-cysteine desulfhydrase 1, mitochondrial [KO:K05396] [EC:4.4.1.15]
115712011  D-cysteine desulfhydrase 2, mitochondrial [KO:K05396] [EC:4.4.1.15]
115719358  probable L-cysteine desulfhydrase, chloroplastic [KO:K22207] [EC:4.4.1.28]
115713573  L-cysteine desulfhydrase [KO:K22207] [EC:4.4.1.28]
115708841  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
115723449  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
115704224  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
115697281  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
115712229  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
115723265  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
115702972  D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like [KO:K00058] [EC:1.1.1.95 1.1.1.399]
115703006  LOW QUALITY PROTEIN: D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like [KO:K00058] [EC:1.1.1.95 1.1.1.399]
115711146  D-3-phosphoglycerate dehydrogenase 3, chloroplastic [KO:K00058] [EC:1.1.1.95 1.1.1.399]
115712615  D-3-phosphoglycerate dehydrogenase 1, chloroplastic [KO:K00058] [EC:1.1.1.95 1.1.1.399]
115702620  phosphoserine aminotransferase 2, chloroplastic [KO:K00831] [EC:2.6.1.52]
115702629  LOW QUALITY PROTEIN: phosphoserine aminotransferase 2, chloroplastic-like [KO:K00831] [EC:2.6.1.52]
Compound
C00019  S-Adenosyl-L-methionine
C00021  S-Adenosyl-L-homocysteine
C00022  Pyruvate
C00041  L-Alanine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00065  L-Serine
C00073  L-Methionine
C00094  Sulfite
C00097  L-Cysteine
C00109  2-Oxobutanoate
C00155  L-Homocysteine
C00170  5'-Methylthioadenosine
C00197  3-Phospho-D-glycerate
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00409  Methanethiol
C00441  L-Aspartate 4-semialdehyde
C00491  L-Cystine
C00506  L-Cysteate
C00606  3-Sulfino-L-alanine
C00793  D-Cysteine
C00957  Mercaptopyruvate
C00979  O-Acetyl-L-serine
C01005  O-Phospho-L-serine
C01077  O-Acetyl-L-homoserine
C01118  O-Succinyl-L-homoserine
C01137  S-Adenosylmethioninamine
C01180  4-Methylthio-2-oxobutanoic acid
C01234  1-Aminocyclopropane-1-carboxylate
C01817  L-Homocystine
C01962  Thiocysteine
C02218  Dehydroalanine
C02291  L-Cystathionine
C02356  (S)-2-Aminobutanoate
C02989  L-Methionine S-oxide
C03082  4-Phospho-L-aspartate
C03089  5-Methylthio-D-ribose
C03145  N-Formylmethionine
C03232  3-Phosphonooxypyruvate
C03431  S-Inosyl-L-homocysteine
C03539  S-Ribosyl-L-homocysteine
C04188  S-Methyl-5-thio-D-ribose 1-phosphate
C04582  S-Methyl-5-thio-D-ribulose 1-phosphate
C05324  Nicotianamine
C05524  Aminoacyl-L-methionine
C05526  S-Glutathionyl-L-cysteine
C05527  3-Sulfinylpyruvate
C05528  3-Sulfopyruvate
C05823  3-Mercaptolactate
C05824  S-Sulfo-L-cysteine
C06547  Ethylene
C08276  3-(Methylthio)propanoate
C09306  Sulfur dioxide
C11437  1-Deoxy-D-xylulose 5-phosphate
C11481  HSO3-
C11499  (S)-3-Sulfolactate
C11537  (2R)-3-Sulfolactate
C15606  1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one
C15650  2,3-Diketo-5-methylthiopentyl-1-phosphate
C15651  2-Hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
C18049  N-Acyl-L-homoserine lactone
C19787  5'-S-Methyl-5'-thioinosine
C21015  gamma-L-Glutamyl-L-2-aminobutyrate
C21016  Ophthalmate
C22359  S-Methyl-1-thio-D-xylulose 5-phosphate
Reference
  Authors
Sekowska A, Denervaud V, Ashida H, Michoud K, Haas D, Yokota A, Danchin A
  Title
Bacterial variations on the methionine salvage pathway.
  Journal
BMC Microbiol 4:9 (2004)
DOI:10.1186/1471-2180-4-9
Reference
  Authors
Ashida H, Saito Y, Kojima C, Kobayashi K, Ogasawara N, Yokota A.
  Title
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO.
  Journal
Science 302:286-90 (2003)
DOI:10.1126/science.1086997
Reference
  Authors
Sekowska A, Danchin A.
  Title
The methionine salvage pathway in Bacillus subtilis.
  Journal
BMC Microbiol 2:8 (2002)
DOI:10.1186/1471-2180-2-8
Reference
  Authors
Berger BJ, English S, Chan G, Knodel MH.
  Title
Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis.
  Journal
J Bacteriol 185:2418-31 (2003)
DOI:10.1128/JB.185.8.2418-2431.2003
Reference
  Authors
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD
  Title
Functional characterization of a methionine gamma-lyase in Arabidopsis and its implication in an alternative to the reverse trans-sulfuration pathway.
  Journal
Plant Cell Physiol 48:232-42 (2007)
DOI:10.1093/pcp/pcl055
Reference
  Authors
Rebeille F, Jabrin S, Bligny R, Loizeau K, Gambonnet B, Van Wilder V, Douce R, Ravanel S
  Title
Methionine catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and leads to S-methylcysteine and isoleucine syntheses.
  Journal
Proc Natl Acad Sci U S A 103:15687-92 (2006)
DOI:10.1073/pnas.0606195103
Reference
  Authors
Pirkov I, Norbeck J, Gustafsson L, Albers E
  Title
A complete inventory of all enzymes in the eukaryotic methionine salvage pathway.
  Journal
FEBS J 275:4111-20 (2008)
DOI:10.1111/j.1742-4658.2008.06552.x
Reference
  Authors
Ashida H, Saito Y, Kojima C, Yokota A
  Title
Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis.
  Journal
Biosci Biotechnol Biochem 72:959-67 (2008)
DOI:10.1271/bbb.70651
Reference
  Authors
Kitabatake M, So MW, Tumbula DL, Soll D
  Title
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes?
  Journal
J Bacteriol 182:143-5 (2000)
DOI:10.1128/JB.182.1.143-145.2000
Reference
  Authors
Mino K, Ishikawa K
  Title
Characterization of a novel thermostable O-acetylserine sulfhydrylase from Aeropyrum pernix K1.
  Journal
J Bacteriol 185:2277-84 (2003)
DOI:10.1128/JB.185.7.2277-2284.2003
Reference
  Authors
Tanabe S
  Title
Development of assay methods for endogenous inorganic sulfur compounds and sulfurtransferases and evaluation of the physiological functions of bound sulfur.
  Journal
Yakugaku Zasshi 128:881-900 (2008)
DOI:10.1248/yakushi.128.881
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL
  Title
Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing.
  Journal
Nat Chem Biol 5:251-7 (2009)
DOI:10.1038/nchembio.153
Related
pathway
csav00010  Glycolysis / Gluconeogenesis
csav00250  Alanine, aspartate and glutamate metabolism
csav00260  Glycine, serine and threonine metabolism
csav00290  Valine, leucine and isoleucine biosynthesis
csav00430  Taurine and hypotaurine metabolism
csav00480  Glutathione metabolism
csav00620  Pyruvate metabolism
csav00640  Propanoate metabolism
csav00770  Pantothenate and CoA biosynthesis
csav00900  Terpenoid backbone biosynthesis
csav00920  Sulfur metabolism
KO pathway
ko00270   
LinkDB

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