KEGG   PATHWAY: gja00240
Entry
gja00240                    Pathway                                
Name
Pyrimidine metabolism - Gekko japonicus (Schlegel's Japanese gecko)
Class
Metabolism; Nucleotide metabolism
Pathway map
gja00240  Pyrimidine metabolism
gja00240

Module
gja_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:gja00240]
gja_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:gja00240]
gja_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gja00240]
gja_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gja00240]
gja_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:gja00240]
Other DBs
GO: 0006220 0006213
Organism
Gekko japonicus (Schlegel's Japanese gecko) [GN:gja]
Gene
107113765  CAD; carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
107124711  DHODH; dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
107105610  UMPS; uridine monophosphate synthetase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
107121335  CMPK1; cytidine/uridine monophosphate kinase 1 [KO:K13800] [EC:2.7.4.14]
107125572  CMPK2; cytidine/uridine monophosphate kinase 2 [KO:K13809] [EC:2.7.4.14]
107106966  NME6; NME/NM23 nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
107106272  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
107126197  NME4; NME/NM23 nucleoside diphosphate kinase 4 [KO:K00940] [EC:2.7.4.6]
107110298  NME7; NME/NM23 family member 7 [KO:K00940] [EC:2.7.4.6]
107118130  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
107118131  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
107120833  adenylate kinase 9-like [KO:K18533] [EC:2.7.4.3 2.7.4.6]
107114991  adenylate kinase 9-like [KO:K18533] [EC:2.7.4.3 2.7.4.6]
107111486  ENTPD3; ectonucleoside triphosphate diphosphohydrolase 3 [KO:K01510] [EC:3.6.1.5]
107121141  ENTPD1; ectonucleoside triphosphate diphosphohydrolase 1 [KO:K01510] [EC:3.6.1.5]
107120421  ENTPD8; ectonucleoside triphosphate diphosphohydrolase 8 [KO:K01510] [EC:3.6.1.5]
107115314  CANT1; calcium activated nucleotidase 1 [KO:K12304] [EC:3.6.1.6]
107107286  ENTPD4; ectonucleoside triphosphate diphosphohydrolase 4 [KO:K12305] [EC:3.6.1.6]
107123169  ENTPD5; ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
107111965  ENTPD6; ectonucleoside triphosphate diphosphohydrolase 6 (putative) [KO:K01511] [EC:3.6.1.6]
107118873  ENPP1; ectonucleotide pyrophosphatase/phosphodiesterase 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
107118871  ENPP3; ectonucleotide pyrophosphatase/phosphodiesterase 3 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
107120381  ASMTL; acetylserotonin O-methyltransferase-like [KO:K25435] [EC:3.6.1.- 2.1.1.-]
107122912  NUDT2; nudix hydrolase 2 [KO:K01518] [EC:3.6.1.17]
107125474  bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like [KO:K01518] [EC:3.6.1.17]
107110854  CTPS1; CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
107115852  CTPS2; CTP synthase 2 [KO:K01937] [EC:6.3.4.2]
107111406  UCKL1; uridine-cytidine kinase 1 like 1 [KO:K00876] [EC:2.7.1.48]
107109056  UCK1; uridine-cytidine kinase 1 [KO:K00876] [EC:2.7.1.48]
107113785  uridine-cytidine kinase-like 1 [KO:K00876] [EC:2.7.1.48]
107125002  UCK2; uridine-cytidine kinase 2 [KO:K00876] [EC:2.7.1.48]
107109481  trifunctional nucleotide phosphoesterase protein YfkN-like [KO:K01081] [EC:3.1.3.5]
107118672  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
107124238  NT5M; 5',3'-nucleotidase, mitochondrial [KO:K01081] [EC:3.1.3.5]
107115958  NT5C1A; 5'-nucleotidase, cytosolic IA [KO:K01081] [EC:3.1.3.5]
107111111  cytosolic 5'-nucleotidase 1B-like [KO:K01081] [EC:3.1.3.5]
107117943  NT5C2; 5'-nucleotidase, cytosolic II [KO:K01081] [EC:3.1.3.5]
107118777  NT5DC4; 5'-nucleotidase domain containing 4 [KO:K01081] [EC:3.1.3.5]
107108861  NT5E; 5'-nucleotidase ecto [KO:K19970] [EC:3.1.3.5]
107110735  UPP2; uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
107124843  uridine phosphorylase 1-like [KO:K00757] [EC:2.4.2.3]
107124844  uridine phosphorylase 1-like [KO:K00757] [EC:2.4.2.3]
107108785  pseudouridine-metabolizing bifunctional protein C1861.05-like [KO:K16330] [EC:4.2.1.70 2.7.1.83]
107105732  NT5C3A; 5'-nucleotidase, cytosolic IIIA [KO:K24242] [EC:3.1.3.91]
107122130  NT5C3B; 5'-nucleotidase, cytosolic IIIB [KO:K24242] [EC:3.1.3.91]
107124499  CDA; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
107122175  RRM1; ribonucleotide reductase catalytic subunit M1 [KO:K10807] [EC:1.17.4.1]
107109636  RRM2; ribonucleotide reductase regulatory subunit M2 [KO:K10808] [EC:1.17.4.1]
107124672  RRM2B; ribonucleotide reductase regulatory TP53 inducible subunit M2B [KO:K10808] [EC:1.17.4.1]
107106259  DCTPP1; dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
107121018  HDDC2; HD domain containing 2 [KO:K07023] [EC:3.1.3.89]
107123240  deoxycytidine kinase-like [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
107123770  DCK; deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
107123673  DCTD; dCMP deaminase [KO:K01493] [EC:3.5.4.12]
107114553  DTYMK; deoxythymidylate kinase [KO:K00943] [EC:2.7.4.9]
107110935  DUT; deoxyuridine triphosphatase [KO:K01520] [EC:3.6.1.23]
107111916  TYMP; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
107123326  TK1; thymidine kinase 1 [KO:K00857] [EC:2.7.1.21]
107121355  TK2; thymidine kinase 2, mitochondrial [KO:K00857] [EC:2.7.1.21]
107122371  TYMS; thymidylate synthetase [KO:K00560] [EC:2.1.1.45]
107121000  dihydropyrimidine dehydrogenase [NADP(+)]-like [KO:K00207] [EC:1.3.1.2]
107107063  DPYS; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
107115099  UPB1; beta-ureidopropionase 1 [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
gja00030  Pentose phosphate pathway
gja00220  Arginine biosynthesis
gja00250  Alanine, aspartate and glutamate metabolism
gja00280  Valine, leucine and isoleucine degradation
gja00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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