KEGG   PATHWAY: hsp00240
Entry
hsp00240                    Pathway                                
Name
Pyrimidine metabolism - Hippoglossus stenolepis (Pacific halibut)
Class
Metabolism; Nucleotide metabolism
Pathway map
hsp00240  Pyrimidine metabolism
hsp00240

Module
hsp_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:hsp00240]
hsp_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:hsp00240]
hsp_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hsp00240]
hsp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:hsp00240]
hsp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:hsp00240]
Other DBs
GO: 0006220 0006213
Organism
Hippoglossus stenolepis (Pacific halibut) [GN:hsp]
Gene
118099395  cad; CAD protein [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
118113341  dhodh; dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
118120538  umps; uridine 5'-monophosphate synthase isoform X1 [KO:K13421] [EC:2.4.2.10 4.1.1.23]
118117945  cmpk; UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
118116692  cmpk2; LOW QUALITY PROTEIN: uncharacterized protein cmpk2 [KO:K13809] [EC:2.7.4.14]
118099949  nme6; nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
118123124  nme3; nucleoside diphosphate kinase 3 isoform X1 [KO:K00940] [EC:2.7.4.6]
118123267  nme4; nucleoside diphosphate kinase, mitochondrial isoform X1 [KO:K00940] [EC:2.7.4.6]
118123290  nucleoside diphosphate kinase A [KO:K00940] [EC:2.7.4.6]
118100978  nucleoside diphosphate kinase A1 [KO:K00940] [EC:2.7.4.6]
118120721  nme7; nucleoside diphosphate kinase 7 [KO:K00940] [EC:2.7.4.6]
118099226  ak9; adenylate kinase 9 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
118099846  adenylate kinase 9-like [KO:K18533] [EC:2.7.4.3 2.7.4.6]
118100263  entpd1; ectonucleoside triphosphate diphosphohydrolase 1 isoform X2 [KO:K01510] [EC:3.6.1.5]
118113819  entpd3; ectonucleoside triphosphate diphosphohydrolase 3 isoform X1 [KO:K01510] [EC:3.6.1.5]
118123085  cant1a; soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
118119853  cant1b; soluble calcium-activated nucleotidase 1b isoform X1 [KO:K12304] [EC:3.6.1.6]
118114926  entpd4; ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
118099456  ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
118116410  entpd5a; ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
118118865  entpd6; ectonucleoside triphosphate diphosphohydrolase 6 isoform X1 [KO:K01511] [EC:3.6.1.6]
118099388  enpp1; ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
118124301  venom phosphodiesterase 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
118120344  asmtl; probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform X1 [KO:K25435] [EC:3.6.1.- 2.1.1.-]
118104700  nudt2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] [KO:K01518] [EC:3.6.1.17]
118113817  CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
118124796  ctps1a; CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
118123261  uridine-cytidine kinase-like 1 [KO:K00876] [EC:2.7.1.48]
118110373  uckl1a; uridine-cytidine kinase-like 1a isoform X1 [KO:K00876] [EC:2.7.1.48]
118110567  uckl1b; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
118117828  uck2b; uridine-cytidine kinase 2-B isoform X1 [KO:K00876] [EC:2.7.1.48]
118120713  uck2a; uridine-cytidine kinase 2-A [KO:K00876] [EC:2.7.1.48]
118125468  uck1; uridine-cytidine kinase 1 [KO:K00876] [EC:2.7.1.48]
118099377  si:ch211-243j20.2; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
118098177  nt5c2l1; 5'-nucleotidase, cytosolic II, like 1 [KO:K01081] [EC:3.1.3.5]
118099836  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
118122795  nt5c2b; cytosolic purine 5'-nucleotidase isoform X2 [KO:K01081] [EC:3.1.3.5]
118110207  cytosolic 5'-nucleotidase 1B [KO:K01081] [EC:3.1.3.5]
118117067  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118100793  5'(3')-deoxyribonucleotidase, mitochondrial [KO:K01081] [EC:3.1.3.5]
118119197  nt5c2a; 5'-nucleotidase, cytosolic IIa isoform X1 [KO:K01081] [EC:3.1.3.5]
118124954  nt5c1aa; 5'-nucleotidase, cytosolic IAa [KO:K01081] [EC:3.1.3.5]
118116699  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118099339  nt5e; 5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
118119930  upp2; uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
118114326  upp1; uridine phosphorylase 1 [KO:K00757] [EC:2.4.2.3]
118110032  zgc:136858; pseudouridine-metabolizing bifunctional protein C1861.05 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
118100617  7-methylguanosine phosphate-specific 5'-nucleotidase [KO:K24242] [EC:3.1.3.91]
118123026  cytosolic 5'-nucleotidase 3 [KO:K24242] [EC:3.1.3.91]
118113618  nt5c3a; cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242] [EC:3.1.3.91]
118104909  cdab; cytidine deaminase b [KO:K01489] [EC:3.5.4.5]
118102504  zgc:103586 [KO:K01489] [EC:3.5.4.5]
118106369  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
118122692  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
118124831  rrm2b; ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
118103994  LOW QUALITY PROTEIN: ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
118125483  dctpp1; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K16904] [EC:3.6.1.12]
118099379  hddc2; HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
118125709  dck; deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
118122042  deoxycytidine kinase 2-like isoform X1 [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
118119023  dctd; deoxycytidylate deaminase isoform X1 [KO:K01493] [EC:3.5.4.12]
118120916  dtymk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
118112506  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1 [KO:K01520] [EC:3.6.1.23]
118101600  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
118119452  tk2; thymidine kinase 2, mitochondrial isoform X1 [KO:K00857] [EC:2.7.1.21]
118119881  tk1; thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
118098519  tyms; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
118117321  dpydb; dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 [KO:K00207] [EC:1.3.1.2]
118114220  dpys; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
118114979  upb1; beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
hsp00030  Pentose phosphate pathway
hsp00220  Arginine biosynthesis
hsp00250  Alanine, aspartate and glutamate metabolism
hsp00280  Valine, leucine and isoleucine degradation
hsp00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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