KEGG   PATHWAY: lrd00230
Entry
lrd00230                    Pathway                                
Name
Purine metabolism - Lolium rigidum (rigid ryegrass)
Class
Metabolism; Nucleotide metabolism
Pathway map
lrd00230  Purine metabolism
lrd00230

Module
lrd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lrd00230]
lrd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lrd00230]
lrd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lrd00230]
lrd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lrd00230]
lrd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lrd00230]
Other DBs
GO: 0006163 0042278
Organism
Lolium rigidum (rigid ryegrass) [GN:lrd]
Gene
124680375  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124652517  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124672775  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
124702592  nudix hydrolase 2-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
124696396  nudix hydrolase 2-like [KO:K26956] [EC:3.6.1.13 3.6.1.22]
124654883  nudix hydrolase 23, chloroplastic-like [KO:K18453] [EC:3.6.1.13 3.6.1.18]
124655677  nudix hydrolase 23, chloroplastic-like [KO:K18453] [EC:3.6.1.13 3.6.1.18]
124668302  nudix hydrolase 14, chloroplastic [KO:K18447] [EC:3.6.1.21]
124649971  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
124704075  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
124704092  phosphoglucomutase, cytoplasmic-like [KO:K01835] [EC:5.4.2.2]
124692008  ribose-phosphate pyrophosphokinase 1, chloroplastic [KO:K00948] [EC:2.7.6.1]
124701167  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
124681733  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
124660285  ribose-phosphate pyrophosphokinase 2, chloroplastic-like [KO:K00948] [EC:2.7.6.1]
124660650  ribose-phosphate pyrophosphokinase 2, chloroplastic-like [KO:K00948] [EC:2.7.6.1]
124691368  ribose-phosphate pyrophosphokinase 1, chloroplastic-like [KO:K00948] [EC:2.7.6.1]
124650157  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
124666658  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
124667813  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
124665168  phosphoribosylamine--glycine ligase-like [KO:K01945] [EC:6.3.4.13]
124699605  phosphoribosylamine--glycine ligase-like [KO:K01945] [EC:6.3.4.13]
124703623  phosphoribosylamine--glycine ligase-like [KO:K01945] [EC:6.3.4.13]
124691722  phosphoribosylglycinamide formyltransferase, chloroplastic-like [KO:K00601] [EC:2.1.2.2]
124696122  phosphoribosylglycinamide formyltransferase, chloroplastic-like [KO:K00601] [EC:2.1.2.2]
124669885  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
124705558  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
124701024  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic-like [KO:K01933] [EC:6.3.3.1]
124688651  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [KO:K01933] [EC:6.3.3.1]
124688676  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [KO:K01933] [EC:6.3.3.1]
124661925  phosphoribosylaminoimidazole carboxylase, chloroplastic [KO:K11808] [EC:4.1.1.21]
124652518  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like [KO:K01923] [EC:6.3.2.6]
124653234  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic-like [KO:K01923] [EC:6.3.2.6]
124681667  adenylosuccinate lyase-like [KO:K01756] [EC:4.3.2.2]
124702348  adenylosuccinate lyase-like [KO:K01756] [EC:4.3.2.2]
124689206  bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
124692667  adenine phosphoribosyltransferase 4-like [KO:K00759] [EC:2.4.2.7]
124700267  adenine phosphoribosyltransferase 2-like [KO:K00759] [EC:2.4.2.7]
124652832  adenine phosphoribosyltransferase 1 [KO:K00759] [EC:2.4.2.7]
124671595  adenine phosphoribosyltransferase 2-like isoform X1 [KO:K00759] [EC:2.4.2.7]
124687722  adenine phosphoribosyltransferase 4-like [KO:K00759] [EC:2.4.2.7]
124665406  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
124677566  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
124708233  hypoxanthine-guanine phosphoribosyltransferase-like [KO:K00760] [EC:2.4.2.8]
124647439  hypoxanthine-guanine phosphoribosyltransferase-like [KO:K00760] [EC:2.4.2.8]
124680477  inosine-5'-monophosphate dehydrogenase-like [KO:K00088] [EC:1.1.1.205]
124704448  inosine-5'-monophosphate dehydrogenase-like [KO:K00088] [EC:1.1.1.205]
124652387  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
124654352  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
124670324  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
124708896  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
124648080  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
124682549  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
124702510  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
124649809  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124681545  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124702375  probable apyrase 1 [KO:K14641] [EC:3.6.1.5]
124672972  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124673422  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124674141  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
124675726  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
124647286  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124649011  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
124650638  inosine triphosphate pyrophosphatase isoform X1 [KO:K01519] [EC:3.6.1.66]
124703440  xanthine dehydrogenase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
124695835  LOW QUALITY PROTEIN: xanthine dehydrogenase-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
124685319  GMP synthase [glutamine-hydrolyzing] [KO:K01951] [EC:6.3.5.2]
124652742  guanylate kinase 1-like [KO:K00942] [EC:2.7.4.8]
124682073  guanylate kinase 2, chloroplastic/mitochondrial-like [KO:K00942] [EC:2.7.4.8]
124655055  guanylate kinase 1-like [KO:K00942] [EC:2.7.4.8]
124703045  guanylate kinase 1-like [KO:K00942] [EC:2.7.4.8]
124703047  guanylate kinase 1-like [KO:K00942] [EC:2.7.4.8]
124672698  guanylate kinase 2, chloroplastic/mitochondrial-like [KO:K00942] [EC:2.7.4.8]
124681805  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124669991  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124688827  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
124688835  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
124678627  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124673029  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124675296  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
124691843  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124665503  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124674340  5'-deoxynucleotidase hdd1-like [KO:K07023] [EC:3.1.3.89]
124687987  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
124651941  probable GTP diphosphokinase RSH3, chloroplastic [KO:K00951] [EC:2.7.6.5]
124681731  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
124702423  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
124687798  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
124674326  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
124707190  GTP diphosphokinase CRSH1, chloroplastic-like [KO:K00951] [EC:2.7.6.5]
124675743  LOW QUALITY PROTEIN: probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
124692564  phytosulfokine receptor 1-like [KO:K27625] [EC:2.7.11.1 4.6.1.2]
124681147  phytosulfokine receptor 1-like [KO:K27625] [EC:2.7.11.1 4.6.1.2]
124701567  adenylosuccinate synthetase, chloroplastic-like [KO:K01939] [EC:6.3.4.4]
124701573  adenylosuccinate synthetase, chloroplastic [KO:K01939] [EC:6.3.4.4]
124697152  adenylosuccinate synthetase 2, chloroplastic-like [KO:K01939] [EC:6.3.4.4]
124697153  adenylosuccinate synthetase 2, chloroplastic [KO:K01939] [EC:6.3.4.4]
124673743  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
124673874  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
124706361  probable AMP deaminase isoform X1 [KO:K01490] [EC:3.5.4.6]
124706368  probable AMP deaminase isoform X1 [KO:K01490] [EC:3.5.4.6]
124692573  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
124692589  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
124673946  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
124675501  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
124681313  adenylate kinase 3-like [KO:K00939] [EC:2.7.4.3]
124683108  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
124683209  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
124670463  probable adenylate kinase 6, chloroplastic [KO:K00939] [EC:2.7.4.3]
124685411  probable adenylate kinase 5, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
124675014  probable adenylate kinase 6, chloroplastic [KO:K00939] [EC:2.7.4.3]
124695181  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
124695212  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
124696034  adenylate kinase 3 [KO:K00939] [EC:2.7.4.3]
124691259  adenylate kinase, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
124691304  adenylate kinase, chloroplastic-like [KO:K00939] [EC:2.7.4.3]
124654365  adenylate kinase isoenzyme 6 homolog [KO:K18532] [EC:2.7.4.3]
124664908  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124678945  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124670070  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124670147  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124653715  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
124654400  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
124654587  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
124703269  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
124679324  ATP sulfurylase 2-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
124672134  ATP sulfurylase 2-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
124704285  ATP-sulfurylase 3, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
124697479  ATP sulfurylase 1, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
124699002  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
124699006  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
124673643  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
124675470  adenylyl-sulfate kinase 3 [KO:K00860] [EC:2.7.1.25]
124696112  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
124696428  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
124661048  uricase-like [KO:K00365] [EC:1.7.3.3]
124661191  uricase-like [KO:K00365] [EC:1.7.3.3]
124702565  uric acid degradation bifunctional protein TTL-like isoform X1 [KO:K13484] [EC:3.5.2.17 4.1.1.97]
124702614  uric acid degradation bifunctional protein TTL-like isoform X1 [KO:K13484] [EC:3.5.2.17 4.1.1.97]
124699956  probable allantoate deiminase [KO:K02083] [EC:3.5.3.9]
124700130  probable allantoate deiminase [KO:K02083] [EC:3.5.3.9]
124677596  probable (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
124669823  probable (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
124652565  ureidoglycolate hydrolase-like [KO:K18151] [EC:3.5.1.116]
124655679  ureidoglycolate hydrolase-like [KO:K18151] [EC:3.5.1.116]
124680824  urease [KO:K01427] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
lrd00030  Pentose phosphate pathway
lrd00220  Arginine biosynthesis
lrd00250  Alanine, aspartate and glutamate metabolism
lrd00260  Glycine, serine and threonine metabolism
lrd00340  Histidine metabolism
lrd00630  Glyoxylate and dicarboxylate metabolism
lrd00730  Thiamine metabolism
lrd00740  Riboflavin metabolism
lrd00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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