KEGG   PATHWAY: lruf00240
Entry
lruf00240                   Pathway                                
Name
Pyrimidine metabolism - Lynx rufus (bobcat)
Class
Metabolism; Nucleotide metabolism
Pathway map
lruf00240  Pyrimidine metabolism
lruf00240

Module
lruf_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lruf00240]
lruf_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:lruf00240]
lruf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lruf00240]
lruf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lruf00240]
lruf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lruf00240]
Other DBs
GO: 0006220 0006213
Organism
Lynx rufus (bobcat) [GN:lruf]
Gene
124503295  CAD protein isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
124511859  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
124526742  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124515953  UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
124503266  UMP-CMP kinase 2, mitochondrial-like [KO:K13809] [EC:2.7.4.14]
124510239  nucleoside diphosphate kinase 7 isoform X1 [KO:K00940] [EC:2.7.4.6]
124525539  nucleoside diphosphate kinase 3 isoform X1 [KO:K00940] [EC:2.7.4.6]
124525561  nucleoside diphosphate kinase, mitochondrial-like [KO:K00940] [EC:2.7.4.6]
124512815  nucleoside diphosphate kinase, mitochondrial-like [KO:K00940] [EC:2.7.4.6]
124513221  nucleoside diphosphate kinase B [KO:K00940] [EC:2.7.4.6]
124513222  nucleoside diphosphate kinase A [KO:K00940] [EC:2.7.4.6]
124523769  nucleoside diphosphate kinase 6 isoform X1 [KO:K00940] [EC:2.7.4.6]
124528858  adenylate kinase 9-like [KO:K18533] [EC:2.7.4.3 2.7.4.6]
124526356  ectonucleoside triphosphate diphosphohydrolase 3 isoform X1 [KO:K01510] [EC:3.6.1.5]
124507017  ectonucleoside triphosphate diphosphohydrolase 1-like isoform X1 [KO:K01510] [EC:3.6.1.5]
124522318  LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
124520490  ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
124503648  ectonucleoside triphosphate diphosphohydrolase 6 isoform X1 [KO:K01511] [EC:3.6.1.6]
124512043  ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
124528991  ectonucleotide pyrophosphatase/phosphodiesterase family member 3 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124529023  ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124509314  probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform X1 [KO:K25435] [EC:3.6.1.- 2.1.1.-]
124525918  bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] [KO:K01518] [EC:3.6.1.17]
124515957  CTP synthase 1 isoform X1 [KO:K01937] [EC:6.3.4.2]
124509379  CTP synthase 2 [KO:K01937] [EC:6.3.4.2]
124510373  uridine-cytidine kinase 2 [KO:K00876] [EC:2.7.1.48]
124525628  uridine-cytidine kinase 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
124503951  LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein 4-like [KO:K01081] [EC:3.1.3.5]
124504173  cytosolic 5'-nucleotidase 1B-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124519523  5'(3')-deoxyribonucleotidase, mitochondrial isoform X1 [KO:K01081] [EC:3.1.3.5]
124513431  5'(3')-deoxyribonucleotidase, cytosolic type [KO:K01081] [EC:3.1.3.5]
124514455  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
124507111  cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
124529368  5'-nucleotidase isoform X1 [KO:K19970] [EC:3.1.3.5]
124522883  uridine phosphorylase 1-like isoform X1 [KO:K00757] [EC:2.4.2.3]
124524940  cytosolic 5'-nucleotidase 3A isoform X1 [KO:K24242] [EC:3.1.3.91]
124522195  7-methylguanosine phosphate-specific 5'-nucleotidase isoform X1 [KO:K24242] [EC:3.1.3.91]
124515023  cytidine deaminase isoform X1 [KO:K01489] [EC:3.5.4.5]
124505231  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
124504016  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
124519049  ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
124517981  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124528846  5'-deoxynucleotidase HDDC2 isoform X1 [KO:K07023] [EC:3.1.3.89]
124520339  deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
124520677  deoxycytidylate deaminase isoform X1 [KO:K01493] [EC:3.5.4.12]
124516339  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
124521617  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial-like [KO:K01520] [EC:3.6.1.23]
124508611  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1 [KO:K01520] [EC:3.6.1.23]
124511360  thymidine kinase 2, mitochondrial-like isoform X1 [KO:K00857] [EC:2.7.1.21]
124513359  thymidine kinase, cytosolic isoform X1 [KO:K00857] [EC:2.7.1.21]
124517594  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
124515401  dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
124519038  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
124518415  beta-ureidopropionase isoform X1 [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lruf00030  Pentose phosphate pathway
lruf00220  Arginine biosynthesis
lruf00250  Alanine, aspartate and glutamate metabolism
lruf00280  Valine, leucine and isoleucine degradation
lruf00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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