KEGG   PATHWAY: mui04622
Entry
mui04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Mesitornis unicolor (brown roatelo)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
mui04622  RIG-I-like receptor signaling pathway
mui04622

Organism
Mesitornis unicolor (brown roatelo) [GN:mui]
Gene
104533342  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
104533258  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
104537675  MAVS; mitochondrial antiviral-signaling protein [KO:K12648]
104533578  DHX58; probable ATP-dependent RNA helicase DHX58 [KO:K12649] [EC:5.6.2.6]
104537198  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
104546579  TANK; TRAF family member-associated NF-kappa-B activator [KO:K12650]
104541118  AZI2; 5-azacytidine-induced protein 2 isoform X1 [KO:K12651]
104534147  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
104538090  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
104542263  IRF7; interferon regulatory factor 7 [KO:K09447]
104539464  LOW QUALITY PROTEIN: interferon beta-like [KO:K05414]
104533588  interferon epsilon-like [KO:K05414]
104542485  LOW QUALITY PROTEIN: interferon-like [KO:K05415]
104533774  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
104543590  FADD; FAS-associated death domain protein [KO:K02373]
104538113  receptor-interacting serine/threonine-protein kinase 1-like [KO:K02861] [EC:2.7.11.1]
104536360  caspase-8-like [KO:K04398] [EC:3.4.22.61]
104536361  caspase-8-like [KO:K04398] [EC:3.4.22.61]
104546789  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
104533819  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
104538960  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
104537709  NFKB1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
104546430  TRAF2; TNF receptor-associated factor 2 [KO:K03173] [EC:2.3.2.27]
104536541  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
104548272  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
104539629  MAP3K1; mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
104544253  mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
104534693  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
104538133  mitogen-activated protein kinase 11-like [KO:K04441] [EC:2.7.11.24]
104544084  mitogen-activated protein kinase 12-like [KO:K04441] [EC:2.7.11.24]
104539184  mitogen-activated protein kinase 14 [KO:K04441] [EC:2.7.11.24]
104547036  mitogen-activated protein kinase 13-like [KO:K04441] [EC:2.7.11.24]
104538275  interleukin-8-like [KO:K10030]
104538276  interleukin-8 [KO:K10030]
104542091  IL12B; interleukin-12 subunit beta [KO:K05425]
104543797  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 [KO:K10652] [EC:2.3.2.27]
104541835  ubiquitin carboxyl-terminal hydrolase CYLD-like [KO:K08601] [EC:3.4.19.12]
104542183  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD [KO:K08601] [EC:3.4.19.12]
104546869  RNF125; E3 ubiquitin-protein ligase RNF125 [KO:K12170] [EC:2.3.2.27]
104539913  ATG5; autophagy protein 5 [KO:K08339]
104536128  ATG12; ubiquitin-like protein ATG12 [KO:K08336]
104543783  NLRX1; NLR family member X1 [KO:K12653]
104533350  TMEM173; stimulator of interferon genes protein [KO:K12654]
104546710  SIKE1; suppressor of IKBKE 1 [KO:K12656]
104541301  ATP-dependent RNA helicase DDX3X [KO:K11594] [EC:5.6.2.7]
104541764  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
104539804  DAK; LOW QUALITY PROTEIN: bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
mui04010  MAPK signaling pathway
mui04120  Ubiquitin mediated proteolysis
mui04210  Apoptosis
KO pathway
ko04622   
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