KEGG   PATHWAY: ogl00230
Entry
ogl00230                    Pathway                                
Name
Purine metabolism - Oryza glaberrima (African rice)
Class
Metabolism; Nucleotide metabolism
Pathway map
ogl00230  Purine metabolism
ogl00230

Module
ogl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ogl00230]
ogl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ogl00230]
ogl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ogl00230]
ogl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ogl00230]
ogl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ogl00230]
Other DBs
GO: 0006163 0042278
Organism
Oryza glaberrima (African rice) [GN:ogl]
Gene
127779151  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
127781469  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
127777924  nudix hydrolase 2 [KO:K26956] [EC:3.6.1.13 3.6.1.22]
127784484  nudix hydrolase 23, chloroplastic [KO:K18453] [EC:3.6.1.13 3.6.1.18]
127775455  nudix hydrolase 14, chloroplastic [KO:K18447] [EC:3.6.1.21]
127766958  phosphoglucomutase, cytoplasmic 2 [KO:K01835] [EC:5.4.2.2]
127752818  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
127762397  ribose-phosphate pyrophosphokinase 1, chloroplastic [KO:K00948] [EC:2.7.6.1]
127777539  ribose-phosphate pyrophosphokinase 2, chloroplastic [KO:K00948] [EC:2.7.6.1]
127768073  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
127773672  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
127760436  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
127782817  phosphoribosylamine--glycine ligase-like isoform X1 [KO:K01945] [EC:6.3.4.13]
127757820  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
127781914  phosphoribosylglycinamide formyltransferase, chloroplastic-like [KO:K00601] [EC:2.1.2.2]
127773267  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
127773449  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
127766251  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [KO:K01933] [EC:6.3.3.1]
127770586  phosphoribosylaminoimidazole carboxylase, chloroplastic [KO:K11808] [EC:4.1.1.21]
127784089  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic [KO:K01923] [EC:6.3.2.6]
127768921  uncharacterized protein LOC127768921 [KO:K01756] [EC:4.3.2.2]
127782886  uncharacterized protein LOC127782886 isoform X1 [KO:K00602] [EC:2.1.2.3 3.5.4.10]
127763405  adenine phosphoribosyltransferase 4-like [KO:K00759] [EC:2.4.2.7]
127778273  adenine phosphoribosyltransferase 1-like isoform X1 [KO:K00759] [EC:2.4.2.7]
127770681  adenine phosphoribosyltransferase 2-like [KO:K00759] [EC:2.4.2.7]
127757650  adenine phosphoribosyltransferase 1-like [KO:K00759] [EC:2.4.2.7]
127757802  adenine phosphoribosyltransferase 1-like [KO:K00759] [EC:2.4.2.7]
127784503  uncharacterized protein LOC127784503 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
127778482  uncharacterized protein LOC127778482 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
127772705  uncharacterized protein LOC127772705 [KO:K00760] [EC:2.4.2.8]
127766226  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
127779691  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
127758002  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
127752911  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
127768855  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
127783342  probable apyrase 6 isoform X1 [KO:K01510] [EC:3.6.1.5]
127767126  probable apyrase 1 isoform X1 [KO:K14641] [EC:3.6.1.5]
127779871  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
127755598  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
127756522  probable apyrase 3 isoform X1 [KO:K14641] [EC:3.6.1.5]
127756526  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
127754352  probable apyrase 3 isoform X1 [KO:K14641] [EC:3.6.1.5]
127754355  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
127753535  inosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
127765581  xanthine dehydrogenase isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
127782521  uncharacterized protein LOC127782521 [KO:K01951] [EC:6.3.5.2]
127765497  guanylate kinase 2, chloroplastic/mitochondrial [KO:K00942] [EC:2.7.4.8]
127757870  guanylate kinase 1 [KO:K00942] [EC:2.7.4.8]
127761118  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
127777659  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
127775386  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
127775447  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
127761262  uncharacterized protein LOC127761262 [KO:K07023] [EC:3.1.3.89]
127756229  uncharacterized protein LOC127756229 [KO:K07023] [EC:3.1.3.89]
127785016  probable GTP diphosphokinase RSH3, chloroplastic [KO:K00951] [EC:2.7.6.5]
127773078  GTP diphosphokinase CRSH3, chloroplastic [KO:K00951] [EC:2.7.6.5]
127773082  GTP diphosphokinase CRSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
127773339  GTP diphosphokinase CRSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
127778290  probable GTP diphosphokinase RSH3, chloroplastic [KO:K00951] [EC:2.7.6.5]
127766848  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
127782446  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
127763832  phytosulfokine receptor 1-like [KO:K27625] [EC:2.7.11.1 4.6.1.2]
127771084  phytosulfokine receptor 1-like [KO:K27625] [EC:2.7.11.1 4.6.1.2]
127766078  adenylosuccinate synthetase 2, chloroplastic [KO:K01939] [EC:6.3.4.4]
127768816  adenylosuccinate synthetase 1, chloroplastic [KO:K01939] [EC:6.3.4.4]
127773680  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
127779782  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
127763045  adenosine kinase 2 [KO:K00856] [EC:2.7.1.20]
127769624  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
127765673  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
127782120  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
127782216  probable adenylate kinase 5, chloroplastic [KO:K00939] [EC:2.7.4.3]
127769504  probable adenylate kinase 6, chloroplastic [KO:K00939] [EC:2.7.4.3]
127783383  probable adenylate kinase 2, chloroplastic [KO:K00939] [EC:2.7.4.3]
127756438  adenylate kinase 3 isoform X1 [KO:K00939] [EC:2.7.4.3]
127754234  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
127778292  adenylate kinase isoenzyme 6 homolog isoform X1 [KO:K18532] [EC:2.7.4.3]
127785231  uncharacterized protein LOC127785231 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
127756213  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
127757854  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
127753655  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
127753985  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
127772355  ATP sulfurylase 2-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
127767841  ATP-sulfurylase 3, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
127779828  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
127768726  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
127753916  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
127763296  uricase [KO:K00365] [EC:1.7.3.3]
127767373  uric acid degradation bifunctional protein TTL isoform X1 [KO:K13484] [EC:3.5.2.17 4.1.1.97]
127769448  probable allantoinase [KO:K01466] [EC:3.5.2.5]
127776171  probable allantoate deiminase [KO:K02083] [EC:3.5.3.9]
127780816  probable (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
127757613  ureidoglycolate hydrolase [KO:K18151] [EC:3.5.1.116]
127758342  urease [KO:K01427] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
ogl00030  Pentose phosphate pathway
ogl00220  Arginine biosynthesis
ogl00250  Alanine, aspartate and glutamate metabolism
ogl00260  Glycine, serine and threonine metabolism
ogl00340  Histidine metabolism
ogl00630  Glyoxylate and dicarboxylate metabolism
ogl00730  Thiamine metabolism
ogl00740  Riboflavin metabolism
ogl00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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