KEGG   PATHWAY: ogo00240
Entry
ogo00240                    Pathway                                
Name
Pyrimidine metabolism - Oncorhynchus gorbuscha (pink salmon)
Class
Metabolism; Nucleotide metabolism
Pathway map
ogo00240  Pyrimidine metabolism
ogo00240

Module
ogo_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ogo00240]
ogo_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ogo00240]
ogo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ogo00240]
ogo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ogo00240]
ogo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ogo00240]
Other DBs
GO: 0006220 0006213
Organism
Oncorhynchus gorbuscha (pink salmon) [GN:ogo]
Gene
123990792  CAD protein-like isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
124019348  CAD protein-like isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
124033825  dhodh; dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
124042077  umps; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124043806  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
124009321  UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
124046294  cmpk2; LOW QUALITY PROTEIN: UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
123996034  nme7; nucleoside diphosphate kinase 7 isoform X1 [KO:K00940] [EC:2.7.4.6]
123995460  nme6; nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
124048119  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
124003606  nucleoside diphosphate kinase B-like [KO:K00940] [EC:2.7.4.6]
123998830  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
124000276  nme4; nucleoside diphosphate kinase, mitochondrial isoform X1 [KO:K00940] [EC:2.7.4.6]
124000280  nucleoside diphosphate kinase 3-like isoform X1 [KO:K00940] [EC:2.7.4.6]
124015258  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
124039282  nme2a; NME/NM23 nucleoside diphosphate kinase 2a [KO:K00940] [EC:2.7.4.6]
123995252  ak9; adenylate kinase 9 isoform X1 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
123996322  ectonucleoside triphosphate diphosphohydrolase 3-like isoform X1 [KO:K01510] [EC:3.6.1.5]
124003949  ectonucleoside triphosphate diphosphohydrolase 8-like isoform X1 [KO:K01510] [EC:3.6.1.5]
124004671  ectonucleoside triphosphate diphosphohydrolase 3-like isoform X1 [KO:K01510] [EC:3.6.1.5]
124020949  entpd1; ectonucleoside triphosphate diphosphohydrolase 1 isoform X1 [KO:K01510] [EC:3.6.1.5]
124029701  ectonucleoside triphosphate diphosphohydrolase 8-like [KO:K01510] [EC:3.6.1.5]
124020825  soluble calcium-activated nucleotidase 1-like isoform X1 [KO:K12304] [EC:3.6.1.6]
124026058  LOW QUALITY PROTEIN: soluble calcium-activated nucleotidase 1-like [KO:K12304] [EC:3.6.1.6]
124034342  ectonucleoside triphosphate diphosphohydrolase 4-like isoform X1 [KO:K12305] [EC:3.6.1.6]
124034915  ectonucleoside triphosphate diphosphohydrolase 4-like [KO:K12305] [EC:3.6.1.6]
123990984  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
123995296  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
124045270  entpd5a; ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
124038192  ectonucleoside triphosphate diphosphohydrolase 6-like [KO:K01511] [EC:3.6.1.6]
124002295  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
123990584  enpp1; ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
123994859  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124012803  venom phosphodiesterase 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
124043742  asmtl; probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein [KO:K25435] [EC:3.6.1.- 2.1.1.-]
124027662  nudt2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] isoform X1 [KO:K01518] [EC:3.6.1.17]
124018390  ctps1b; CTP synthase 1b isoform X1 [KO:K01937] [EC:6.3.4.2]
124012299  CTP synthase 1-like [KO:K01937] [EC:6.3.4.2]
124043373  CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
123996685  uck2a; uridine-cytidine kinase 2-A [KO:K00876] [EC:2.7.1.48]
123995124  si:ch211-243j20.2; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
124047948  uck1; uridine-cytidine kinase 1 [KO:K00876] [EC:2.7.1.48]
124038049  uridine-cytidine kinase 2-A [KO:K00876] [EC:2.7.1.48]
124045606  uckl1b; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
124016616  uridine-cytidine kinase 1-like [KO:K00876] [EC:2.7.1.48]
124032119  uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
124009517  uck2b; uridine-cytidine kinase 2-B isoform X1 [KO:K00876] [EC:2.7.1.48]
123990911  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
123995373  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
124009754  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
124003205  cytosolic purine 5'-nucleotidase-like [KO:K01081] [EC:3.1.3.5]
124048217  5'(3')-deoxyribonucleotidase, mitochondrial-like [KO:K01081] [EC:3.1.3.5]
124041317  nt5c2a; 5'-nucleotidase, cytosolic IIa isoform X1 [KO:K01081] [EC:3.1.3.5]
124048861  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124034943  trifunctional nucleotide phosphoesterase protein YfkN-like [KO:K01081] [EC:3.1.3.5]
124012283  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
124007111  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124045242  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
124015450  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
124002313  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
123990639  snake venom 5'-nucleotidase-like [KO:K19970] [EC:3.1.3.5]
123994909  nt5e; 5'-nucleotidase isoform X1 [KO:K19970] [EC:3.1.3.5]
124001911  snake venom 5'-nucleotidase-like [KO:K19970] [EC:3.1.3.5]
124019596  upp1; uridine phosphorylase 1 isoform X1 [KO:K00757] [EC:2.4.2.3]
124042186  uridine phosphorylase 2-like [KO:K00757] [EC:2.4.2.3]
124043820  uridine phosphorylase 2-like [KO:K00757] [EC:2.4.2.3]
124032784  zgc:136858; pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
123997779  cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242] [EC:3.1.3.91]
124043014  7-methylguanosine phosphate-specific 5'-nucleotidase-like [KO:K24242] [EC:3.1.3.91]
124005916  cytosolic 5'-nucleotidase 3-like isoform X1 [KO:K24242] [EC:3.1.3.91]
124015970  cytosolic 5'-nucleotidase 3-like [KO:K24242] [EC:3.1.3.91]
124022837  cytidine deaminase-like isoform X1 [KO:K01489] [EC:3.5.4.5]
124014326  cytidine deaminase-like [KO:K01489] [EC:3.5.4.5]
124031638  cytidine deaminase-like [KO:K01489] [EC:3.5.4.5]
124045999  cytidine deaminase-like [KO:K01489] [EC:3.5.4.5]
124009694  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
123999969  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
123990611  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
123994878  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
124043117  rrm2b; ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
124013366  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
124001146  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
123995053  hddc2; HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
124047935  dck; deoxycytidine kinase isoform X1 [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
124014515  zgc:110540; deoxynucleoside kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
124013217  dctd; deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
124017143  deoxycytidylate deaminase-like [KO:K01493] [EC:3.5.4.12]
123996543  dtymk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
124033519  deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 [KO:K01520] [EC:3.6.1.23]
124033522  deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 [KO:K01520] [EC:3.6.1.23]
124020946  deoxyuridine 5'-triphosphate nucleotidohydrolase-like isoform X1 [KO:K01520] [EC:3.6.1.23]
124019713  thymidine phosphorylase-like isoform X1 [KO:K00758] [EC:2.4.2.4]
124019715  thymidine phosphorylase-like [KO:K00758] [EC:2.4.2.4]
124033848  thymidine kinase 2, mitochondrial-like isoform X1 [KO:K00857] [EC:2.7.1.21]
124020829  tk1; thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
124035866  thymidine kinase 2, mitochondrial-like isoform X1 [KO:K00857] [EC:2.7.1.21]
124039790  tyms; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
123991186  dihydropyrimidine dehydrogenase [NADP(+)]-like [KO:K00207] [EC:1.3.1.2]
124009398  dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
124005899  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
124036176  upb1; beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
ogo00030  Pentose phosphate pathway
ogo00220  Arginine biosynthesis
ogo00250  Alanine, aspartate and glutamate metabolism
ogo00280  Valine, leucine and isoleucine degradation
ogo00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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