KEGG   PATHWAY: oke00240
Entry
oke00240                    Pathway                                
Name
Pyrimidine metabolism - Oncorhynchus keta (chum salmon)
Class
Metabolism; Nucleotide metabolism
Pathway map
oke00240  Pyrimidine metabolism
oke00240

Module
oke_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:oke00240]
oke_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:oke00240]
oke_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:oke00240]
oke_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:oke00240]
oke_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:oke00240]
Other DBs
GO: 0006220 0006213
Organism
Oncorhynchus keta (chum salmon) [GN:oke]
Gene
118386940  CAD protein-like isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
118398613  cad; CAD protein isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
118393786  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
118385966  umps; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
118367139  uridine 5'-monophosphate synthase-like [KO:K13421] [EC:2.4.2.10 4.1.1.23]
118402359  UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
118368495  cmpk2; UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
118384114  nme3; nucleoside diphosphate kinase 3 isoform X1 [KO:K00940] [EC:2.7.4.6]
118374304  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
118383330  nme6; LOW QUALITY PROTEIN: nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
118365219  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
118389450  nucleoside diphosphate kinase-like isoform X1 [KO:K00940] [EC:2.7.4.6]
118357423  nme2a; NME/NM23 nucleoside diphosphate kinase 2a isoform X1 [KO:K00940] [EC:2.7.4.6]
118378298  nme7; LOW QUALITY PROTEIN: nucleoside diphosphate kinase 7 [KO:K00940] [EC:2.7.4.6]
118381765  nucleoside diphosphate kinase 6 [KO:K00940] [EC:2.7.4.6]
118384236  nme4; nucleoside diphosphate kinase, mitochondrial [KO:K00940] [EC:2.7.4.6]
118384464  nucleoside diphosphate kinase A-like [KO:K00940] [EC:2.7.4.6]
118372015  ak9; adenylate kinase 9 isoform X1 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
127925608  LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 1-like [KO:K01510] [EC:3.6.1.5]
127929406  LOW QUALITY PROTEIN: ectonucleoside triphosphate diphosphohydrolase 1-like [KO:K01510] [EC:3.6.1.5]
118364548  ectonucleoside triphosphate diphosphohydrolase 3-like [KO:K01510] [EC:3.6.1.5]
118388784  ectonucleoside triphosphate diphosphohydrolase 8-like isoform X1 [KO:K01510] [EC:3.6.1.5]
118367716  ectonucleoside triphosphate diphosphohydrolase 3-like [KO:K01510] [EC:3.6.1.5]
118400484  ectonucleoside triphosphate diphosphohydrolase 8 [KO:K01510] [EC:3.6.1.5]
118371787  cant1a; soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
118381862  cant1b; soluble calcium-activated nucleotidase 1b isoform X1 [KO:K12304] [EC:3.6.1.6]
118393177  ectonucleoside triphosphate diphosphohydrolase 4-like isoform X1 [KO:K12305] [EC:3.6.1.6]
118358312  ectonucleoside triphosphate diphosphohydrolase 4-like [KO:K12305] [EC:3.6.1.6]
118362513  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
118387074  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
118398416  ectonucleoside triphosphate diphosphohydrolase 5-like isoform X1 [KO:K01511] [EC:3.6.1.6]
118368287  ectonucleoside triphosphate diphosphohydrolase 5-like [KO:K01511] [EC:3.6.1.6]
118401026  ectonucleoside triphosphate diphosphohydrolase 6-like isoform X1 [KO:K01511] [EC:3.6.1.6]
118386652  ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
118371908  enpp1; ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
118399350  venom phosphodiesterase 1 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
118367206  asmtl; probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein [KO:K25435] [EC:3.6.1.- 2.1.1.-]
118400544  nudt2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] isoform X1 [KO:K01518] [EC:3.6.1.17]
118398041  CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
118399484  CTP synthase 1-like [KO:K01937] [EC:6.3.4.2]
118367245  ctps1b; CTP synthase 1b [KO:K01937] [EC:6.3.4.2]
118385531  uridine-cytidine kinase 1-like [KO:K00876] [EC:2.7.1.48]
118393540  uridine-cytidine kinase 2-A-like [KO:K00876] [EC:2.7.1.48]
118359588  uridine-cytidine kinase-like 1 [KO:K00876] [EC:2.7.1.48]
118387361  uck1; uridine-cytidine kinase 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
118386937  uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
118358837  uridine-cytidine kinase 2-A isoform X1 [KO:K00876] [EC:2.7.1.48]
118401774  uck2b; uridine-cytidine kinase 2-B [KO:K00876] [EC:2.7.1.48]
118385212  cytosolic purine 5'-nucleotidase-like [KO:K01081] [EC:3.1.3.5]
118369632  nt5c2a; 5'-nucleotidase, cytosolic IIa isoform X1 [KO:K01081] [EC:3.1.3.5]
118362404  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118387119  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118387622  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
118396474  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
118387149  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118369098  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118398499  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
118357954  trifunctional nucleotide phosphoesterase protein YfkN-like [KO:K01081] [EC:3.1.3.5]
118389417  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
127910015  cytosolic 5'-nucleotidase 1A-like isoform X1 [KO:K01081] [EC:3.1.3.5]
118374556  cytosolic purine 5'-nucleotidase-like isoform X1 [KO:K01081] [EC:3.1.3.5]
118367544  5'(3')-deoxyribonucleotidase, mitochondrial-like [KO:K01081] [EC:3.1.3.5]
118386709  nt5e; 5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
118362300  snake venom 5'-nucleotidase-like isoform X1 [KO:K19970] [EC:3.1.3.5]
118398779  snake venom 5'-nucleotidase-like isoform X1 [KO:K19970] [EC:3.1.3.5]
118385988  uridine phosphorylase 2-like isoform X1 [KO:K00757] [EC:2.4.2.3]
118373602  upp1; uridine phosphorylase 1 isoform X1 [KO:K00757] [EC:2.4.2.3]
118367124  uridine phosphorylase 2-like [KO:K00757] [EC:2.4.2.3]
118395992  uncharacterized protein zgc:136858 isoform X1 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
118370452  cytosolic 5'-nucleotidase 3-like [KO:K24242] [EC:3.1.3.91]
118377984  7-methylguanosine phosphate-specific 5'-nucleotidase-like [KO:K24242] [EC:3.1.3.91]
118364469  nt5c3a; cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242] [EC:3.1.3.91]
118367523  cytosolic 5'-nucleotidase 3-like isoform X1 [KO:K24242] [EC:3.1.3.91]
118364930  7-methylguanosine phosphate-specific 5'-nucleotidase-like isoform X1 [KO:K24242] [EC:3.1.3.91]
118365257  cytosolic 5'-nucleotidase 3-like [KO:K24242] [EC:3.1.3.91]
118359988  cytidine deaminase-like [KO:K01489] [EC:3.5.4.5]
118360760  cytidine deaminase-like isoform X2 [KO:K01489] [EC:3.5.4.5]
118399915  cytidine deaminase-like [KO:K01489] [EC:3.5.4.5]
118392636  zgc:103586 [KO:K01489] [EC:3.5.4.5]
118390178  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
118391243  ribonucleoside-diphosphate reductase large subunit isoform X1 [KO:K10807] [EC:1.17.4.1]
118386682  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
118397925  rrm2b; ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
118398808  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
118371735  dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
127907947  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
118386853  hddc2; HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
118373184  dck; deoxycytidine kinase isoform X1 [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
118389771  zgc:110540; deoxynucleoside kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
118363021  uncharacterized protein LOC118363021 isoform X1 [KO:K01493] [EC:3.5.4.12]
118395556  dctd; deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
118380857  dtymk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
118375231  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X1 [KO:K01520] [EC:3.6.1.23]
127918383  deoxyuridine 5'-triphosphate nucleotidohydrolase-like [KO:K01520] [EC:3.6.1.23]
118372474  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
118393758  thymidine kinase 2, mitochondrial-like isoform X1 [KO:K00857] [EC:2.7.1.21]
118377767  thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
127931947  tk1; thymidine kinase, cytosolic [KO:K00857] [EC:2.7.1.21]
118358239  thymidine kinase 2, mitochondrial isoform X1 [KO:K00857] [EC:2.7.1.21]
118373677  tyms; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
118361160  dihydropyrimidine dehydrogenase [NADP(+)]-like isoform X1 [KO:K00207] [EC:1.3.1.2]
118402232  dpydb; dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
118374708  dihydropyrimidinase-like [KO:K01464] [EC:3.5.2.2]
118358211  upb1; beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
oke00030  Pentose phosphate pathway
oke00220  Arginine biosynthesis
oke00250  Alanine, aspartate and glutamate metabolism
oke00280  Valine, leucine and isoleucine degradation
oke00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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