KEGG   PATHWAY: omy00240
Entry
omy00240                    Pathway                                
Name
Pyrimidine metabolism - Oncorhynchus mykiss (rainbow trout)
Class
Metabolism; Nucleotide metabolism
Pathway map
omy00240  Pyrimidine metabolism
omy00240

Module
omy_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:omy00240]
omy_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:omy00240]
omy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:omy00240]
omy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:omy00240]
omy_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:omy00240]
Other DBs
GO: 0006220 0006213
Organism
Oncorhynchus mykiss (rainbow trout) [GN:omy]
Gene
110522267  cad; CAD protein isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
100135860  cpsaseii; CAD protein isoform X1 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
110506427  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
110526313  dhodh; dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
110501533  uridine 5'-monophosphate synthase isoform X1 [KO:K13421] [EC:2.4.2.10 4.1.1.23]
110520037  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
110530069  cmpk; UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
110505317  cmpk2; UMP-CMP kinase 2, mitochondrial [KO:K13809] [EC:2.7.4.14]
110494618  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
110522647  nme6; nucleoside diphosphate kinase 6 isoform X1 [KO:K00940] [EC:2.7.4.6]
100135963  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
100301668  nme4; NME/NM23 nucleoside diphosphate kinase 4 [KO:K00940] [EC:2.7.4.6]
100301725  nme7; nucleoside diphosphate kinase 7 [KO:K00940] [EC:2.7.4.6]
100305319  ndkb; Nucleoside diphosphate kinase B [KO:K00940] [EC:2.7.4.6]
110537887  nme3; nucleoside diphosphate kinase 3 isoform X1 [KO:K00940] [EC:2.7.4.6]
110538120  nucleoside diphosphate kinase B [KO:K00940] [EC:2.7.4.6]
110498934  nme2a; NME/NM23 nucleoside diphosphate kinase 2a [KO:K00940] [EC:2.7.4.6]
110522369  ak9; adenylate kinase 9 isoform X1 [KO:K18533] [EC:2.7.4.3 2.7.4.6]
110528323  entpd8; ectonucleoside triphosphate diphosphohydrolase 8 isoform X1 [KO:K01510] [EC:3.6.1.5]
110512886  ectonucleoside triphosphate diphosphohydrolase 3 [KO:K01510] [EC:3.6.1.5]
110514391  ectonucleoside triphosphate diphosphohydrolase 1 [KO:K01510] [EC:3.6.1.5]
110485980  ectonucleoside triphosphate diphosphohydrolase 3 [KO:K01510] [EC:3.6.1.5]
110518781  ectonucleoside triphosphate diphosphohydrolase 1 isoform X1 [KO:K01510] [EC:3.6.1.5]
110494099  ectonucleoside triphosphate diphosphohydrolase 8 isoform X1 [KO:K01510] [EC:3.6.1.5]
110485510  soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
110485511  soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
110487066  soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
110487067  soluble calcium-activated nucleotidase 1 isoform X1 [KO:K12304] [EC:3.6.1.6]
110536003  entpd4; ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
110525636  ectonucleoside triphosphate diphosphohydrolase 4 isoform X1 [KO:K12305] [EC:3.6.1.6]
110502374  entpd6; ectonucleoside triphosphate diphosphohydrolase 6 [KO:K01511] [EC:3.6.1.6]
110522461  ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
110529861  ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
110497901  ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
110505564  entpd5a; ectonucleoside triphosphate diphosphohydrolase 5 [KO:K01511] [EC:3.6.1.6]
110532586  ectonucleoside triphosphate diphosphohydrolase 6-like [KO:K01511] [EC:3.6.1.6]
110522031  ectonucleotide pyrophosphatase/phosphodiesterase family member 1 isoform X1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
110496257  venom phosphodiesterase 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
110529418  enpp1; ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
110519966  asmtl; probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform X2 [KO:K25435] [EC:3.6.1.- 2.1.1.-]
110528456  nudt2; bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] isoform X1 [KO:K01518] [EC:3.6.1.17]
110496409  CTP synthase 1 isoform X1 [KO:K01937] [EC:6.3.4.2]
110519510  ctps1b; CTP synthase 1b [KO:K01937] [EC:6.3.4.2]
110488169  CTP synthase 1 [KO:K01937] [EC:6.3.4.2]
110521780  uridine-cytidine kinase 2-A isoform X1 [KO:K00876] [EC:2.7.1.48]
110522263  si:ch211-243j20.2; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
110509503  uridine-cytidine kinase 1 [KO:K00876] [EC:2.7.1.48]
110523291  uck1; uridine-cytidine kinase 1 isoform X2 [KO:K00876] [EC:2.7.1.48]
110530771  uck2b; uridine-cytidine kinase 2-B [KO:K00876] [EC:2.7.1.48]
110524694  uridine-cytidine kinase 2-A [KO:K00876] [EC:2.7.1.48]
110492513  uckl1b; uridine-cytidine kinase-like 1 isoform X1 [KO:K00876] [EC:2.7.1.48]
110532503  uckl1a; uridine-cytidine kinase-like 1 isoform X2 [KO:K00876] [EC:2.7.1.48]
110527870  nt5c2a; 5'-nucleotidase, cytosolic IIa isoform X1 [KO:K01081] [EC:3.1.3.5]
118964468  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
110522547  cytosolic 5'-nucleotidase 1A isoform X1 [KO:K01081] [EC:3.1.3.5]
110522548  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
110536356  trifunctional nucleotide phosphoesterase protein YfkN-like isoform X1 [KO:K01081] [EC:3.1.3.5]
110496747  nt5c1aa; 5'-nucleotidase, cytosolic IAa isoform X1 [KO:K01081] [EC:3.1.3.5]
110523681  nt5c2l1; cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
110491452  5'(3')-deoxyribonucleotidase, mitochondrial [KO:K01081] [EC:3.1.3.5]
110497997  cytosolic 5'-nucleotidase 1A-like [KO:K01081] [EC:3.1.3.5]
110505450  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
110485755  cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
110492911  cytosolic 5'-nucleotidase 1A [KO:K01081] [EC:3.1.3.5]
110493471  cytosolic purine 5'-nucleotidase isoform X1 [KO:K01081] [EC:3.1.3.5]
110522099  5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
110529479  5'-nucleotidase isoform X1 [KO:K19970] [EC:3.1.3.5]
110498125  snake venom 5'-nucleotidase [KO:K19970] [EC:3.1.3.5]
110501516  uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
110505617  upp1; uridine phosphorylase 1 isoform X1 [KO:K00757] [EC:2.4.2.3]
110520054  uridine phosphorylase 2 [KO:K00757] [EC:2.4.2.3]
110500088  zgc:136858; pseudouridine-metabolizing bifunctional protein C1861.05 isoform X1 [KO:K16330] [EC:4.2.1.70 2.7.1.83]
110503928  cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242] [EC:3.1.3.91]
110491663  7-methylguanosine phosphate-specific 5'-nucleotidase isoform X1 [KO:K24242] [EC:3.1.3.91]
110538178  cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242] [EC:3.1.3.91]
110486248  cytosolic 5'-nucleotidase 3 [KO:K24242] [EC:3.1.3.91]
110486984  cytosolic 5'-nucleotidase 3 isoform X1 [KO:K24242] [EC:3.1.3.91]
110527709  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
110492080  uncharacterized protein LOC110492080 isoform X1 [KO:K01489] [EC:3.5.4.5]
110533030  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
110500581  zgc:103586 [KO:K01489] [EC:3.5.4.5]
110537378  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
110533741  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
110522065  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
110529451  ribonucleoside-diphosphate reductase subunit M2 [KO:K10808] [EC:1.17.4.1]
110487817  rrm2b; ribonucleoside-diphosphate reductase subunit M2 B [KO:K10808] [EC:1.17.4.1]
110534510  dCTP pyrophosphatase 1-like [KO:K16904] [EC:3.6.1.12]
110497382  dctpp1; dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
110522185  hddc2; HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
100305233  dck; deoxycytidine kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
110533402  zgc:110540; deoxynucleoside kinase [KO:K00893] [EC:2.7.1.74 2.7.1.76 2.7.1.113]
110534481  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
110497396  deoxycytidylate deaminase isoform X1 [KO:K01493] [EC:3.5.4.12]
110524874  dtymk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
110506796  deoxyuridine 5'-triphosphate nucleotidohydrolase isoform X1 [KO:K01520] [EC:3.6.1.23]
110506799  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase isoform X1 [KO:K01520] [EC:3.6.1.23]
110516855  thymidine phosphorylase-like [KO:K00758] [EC:2.4.2.4]
110499793  tymp; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
118938844  thymidine phosphorylase-like [KO:K00758] [EC:2.4.2.4]
118942878  thymidine phosphorylase-like [KO:K00758] [EC:2.4.2.4]
100301667  tk1; thymidine kinase 1, soluble [KO:K00857] [EC:2.7.1.21]
110506346  tk2; thymidine kinase 2, mitochondrial isoform X1 [KO:K00857] [EC:2.7.1.21]
110526280  thymidine kinase 2, mitochondrial [KO:K00857] [EC:2.7.1.21]
118940028  thymidine kinase, cytosolic-like [KO:K00857] [EC:2.7.1.21]
110489946  tyms; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
110535495  dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 [KO:K00207] [EC:1.3.1.2]
110530943  dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
110512399  dihydropyrimidinase isoform X2 [KO:K01464] [EC:3.5.2.2]
100305292  upb1; beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
omy00030  Pentose phosphate pathway
omy00220  Arginine biosynthesis
omy00250  Alanine, aspartate and glutamate metabolism
omy00280  Valine, leucine and isoleucine degradation
omy00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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