KEGG   PATHWAY: pavi03022
Entry
pavi03022                   Pathway                                
Name
Basal transcription factors - Prunus avium (sweet cherry)
Class
Genetic Information Processing; Transcription
Pathway map
pavi03022  Basal transcription factors
pavi03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Prunus avium (sweet cherry) [GN:pavi]
Gene
110757073  transcription initiation factor IIA large subunit-like [KO:K03122]
110772114  transcription initiation factor IIA subunit 2 [KO:K03123]
110750262  transcription initiation factor IIB-like [KO:K03124]
110767218  transcription initiation factor IIB [KO:K03124]
110750273  transcription initiation factor IIB-like [KO:K03124]
110765338  plant-specific TFIIB-related protein 1 [KO:K03124]
110752055  transcription initiation factor IIB-like [KO:K03124]
110745330  TATA-box-binding protein 1-like [KO:K03120]
110759006  TATA-box-binding protein [KO:K03120]
110767034  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
110767045  transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
110754021  transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
110754081  transcription initiation factor TFIID subunit 2 [KO:K03128]
110763025  transcription initiation factor TFIID subunit 7 isoform X1 [KO:K03132]
110761479  transcription initiation factor TFIID subunit 8 [KO:K14649]
110745220  transcription initiation factor TFIID subunit 8 [KO:K14649]
110772174  transcription initiation factor TFIID subunit 8-like [KO:K14649]
110749427  transcription initiation factor TFIID subunit 10 isoform X1 [KO:K03134]
110762668  transcription initiation factor TFIID subunit 5 [KO:K03130]
110766333  transcription initiation factor TFIID subunit 4b isoform X1 [KO:K03129]
110752233  transcription initiation factor TFIID subunit 4b-like isoform X1 [KO:K03129]
110753557  transcription initiation factor TFIID subunit 12 [KO:K03126]
110744865  transcription initiation factor TFIID subunit 12b [KO:K03126]
110766651  transcription initiation factor TFIID subunit 6-like [KO:K03131]
110772443  transcription initiation factor TFIID subunit 6 [KO:K03131]
110768893  transcription initiation factor TFIID subunit 9-like [KO:K03133]
110768902  transcription initiation factor TFIID subunit 9-like [KO:K03133]
110763648  transcription initiation factor TFIID subunit 11 [KO:K03135]
110765215  transcription initiation factor TFIID subunit 13 [KO:K03127]
110750119  LOW QUALITY PROTEIN: transcription initiation factor IIE subunit alpha-like [KO:K03136]
110754121  general transcription factor IIE subunit 1 [KO:K03136]
110759185  transcription initiation factor IIE subunit beta-like isoform X1 [KO:K03137]
110745640  transcription initiation factor IIE subunit beta-like [KO:K03137]
110764535  transcription initiation factor IIF subunit alpha isoform X1 [KO:K03138]
110767951  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
110771582  transcription initiation factor IIF subunit beta [KO:K03139] [EC:5.6.2.-]
110765766  probable RNA polymerase II transcription factor B subunit 1-3 isoform X1 [KO:K03141]
110766149  probable RNA polymerase II transcription factor B subunit 1-3 [KO:K03141]
110771269  general transcription factor IIH subunit 2-like [KO:K03142]
110750614  RNA polymerase II transcription factor B subunit 4 [KO:K03143]
110766805  RNA polymerase II transcription factor B subunit 2 isoform X1 [KO:K03144]
110762496  DNA repair helicase XPB1 [KO:K10843] [EC:5.6.2.4]
110749841  DNA repair helicase XPD [KO:K10844] [EC:5.6.2.3]
110753654  RNA polymerase II transcription factor B subunit 5-like [KO:K10845]
110747017  cyclin-dependent kinase D-3 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
110756952  uncharacterized protein LOC110756952 isoform X1 [KO:K10842]
110745961  cyclin-H1-1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
pavi03020  RNA polymerase
pavi03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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