KEGG   PATHWAY: slud03013
Entry
slud03013                   Pathway                                
Name
Nucleocytoplasmic transport - Saccharomycodes ludwigii
Description
The exchange of molecules between the nucleus and cytoplasm is mediated through nuclear pore complexes (NPCs) embedded in the nuclear envelope. The NPC is composed of highly conserved, distinct structural modules: the inner pore ring, the cytoplasmic and nuclear rings as well as the cytoplasmic filaments and the nuclear basket. Nuclear transport receptors (e.g. importins and exportins) mediate translocation of cargos through the NPC. Cargo proteins harbouring a nuclear export signal (NES) bind to exportins and Ran-GTP to form an export complex in the nucleoplasm. Nuclear export of bulk mRNA is provided by the non-karyopherin transport proteins TAP-p15 in a Ran-GTP-independent manner. Several EJC factors are known to function in mRNA export.
Class
Genetic Information Processing; Translation
Pathway map
slud03013  Nucleocytoplasmic transport
slud03013

Other DBs
GO: 0050658
Organism
Saccharomycodes ludwigii [GN:slud]
Gene
SCDLUD_001929  hypothetical protein [KO:K18723]
SCDLUD_003171  hypothetical protein [KO:K18655] [EC:5.6.2.7]
SCDLUD_000161  hypothetical protein [KO:K14298]
SCDLUD_000806  hypothetical protein [KO:K14319]
SCDLUD_004253  hypothetical protein [KO:K10577]
SCDLUD_000240  hypothetical protein [KO:K14004]
SCDLUD_001036  hypothetical protein [KO:K14299]
SCDLUD_004815  hypothetical protein [KO:K14306]
SCDLUD_001403  hypothetical protein [KO:K14307]
SCDLUD_004816  hypothetical protein [KO:K14310]
SCDLUD_000165  hypothetical protein [KO:K14312]
SCDLUD_000595  hypothetical protein [KO:K14309]
SCDLUD_002425  hypothetical protein [KO:K18725]
SCDLUD_002984  hypothetical protein [KO:K15042]
SCDLUD_000653  hypothetical protein [KO:K14293]
SCDLUD_002391  hypothetical protein [KO:K18752]
SCDLUD_003280  hypothetical protein [KO:K15436]
SCDLUD_000156  hypothetical protein [KO:K20221]
SCDLUD_004422  hypothetical protein [KO:K20222]
SCDLUD_003267  hypothetical protein [KO:K20223]
SCDLUD_004371  hypothetical protein [KO:K20223]
SCDLUD_002267  hypothetical protein [KO:K20224]
SCDLUD_002109  hypothetical protein [KO:K25201]
SCDLUD_004501  hypothetical protein [KO:K14290]
SCDLUD_002269  hypothetical protein [KO:K18423]
SCDLUD_000416  hypothetical protein [KO:K14288]
SCDLUD_004559  hypothetical protein [KO:K14289]
SCDLUD_000875  hypothetical protein [KO:K07936]
SCDLUD_000549  hypothetical protein [KO:K03231]
SCDLUD_001169  hypothetical protein [KO:K03231]
SCDLUD_002418  hypothetical protein [KO:K12882]
SCDLUD_001050  hypothetical protein [KO:K12883]
SCDLUD_004761  hypothetical protein [KO:K07562]
SCDLUD_003613  hypothetical protein [KO:K13025] [EC:5.6.2.7]
SCDLUD_003238  hypothetical protein [KO:K12881]
SCDLUD_004116  hypothetical protein [KO:K14326] [EC:5.6.2.5 5.6.2.3]
SCDLUD_002183  hypothetical protein [KO:K14284]
SCDLUD_004290  hypothetical protein [KO:K14543]
SCDLUD_002651  hypothetical protein [KO:K12812] [EC:5.6.2.7]
Reference
  Authors
Tran EJ, Wente SR
  Title
Dynamic nuclear pore complexes: life on the edge.
  Journal
Cell 125:1041-53 (2006)
DOI:10.1016/j.cell.2006.05.027
Reference
  Authors
Rodriguez MS, Dargemont C, Stutz F
  Title
Nuclear export of RNA.
  Journal
Biol Cell 96:639-55 (2004)
DOI:10.1016/j.biolcel.2004.04.014
Reference
  Authors
Palancade B, Doye V
  Title
Sumoylating and desumoylating enzymes at nuclear pores: underpinning their unexpected duties?
  Journal
Trends Cell Biol 18:174-83 (2008)
DOI:10.1016/j.tcb.2008.02.001
Reference
  Authors
Reed R, Cheng H
  Title
TREX, SR proteins and export of mRNA.
  Journal
Curr Opin Cell Biol 17:269-73 (2005)
DOI:10.1016/j.ceb.2005.04.011
Reference
  Authors
Tange TO, Shibuya T, Jurica MS, Moore MJ
  Title
Biochemical analysis of the EJC reveals two new factors and a stable tetrameric protein core.
  Journal
RNA 11:1869-83 (2005)
DOI:10.1261/rna.2155905
Reference
  Authors
Beck M, Schirmacher P, Singer S
  Title
Alterations of the nuclear transport system in hepatocellular carcinoma - New basis for therapeutic strategies.
  Journal
J Hepatol 67:1051-1061 (2017)
DOI:10.1016/j.jhep.2017.06.021
Related
pathway
slud03015  mRNA surveillance pathway
KO pathway
ko03013   
LinkDB

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