KEGG   PATHWAY: tcc01100
Entry
tcc01100                    Pathway                                
Name
Metabolic pathways - Theobroma cacao (cacao)
Class
Pathway map
tcc01100  Metabolic pathways
tcc01100

Module
tcc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:tcc01100]
tcc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:tcc01100]
tcc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tcc01100]
tcc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tcc01100]
tcc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:tcc01100]
tcc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tcc01100]
tcc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tcc01100]
tcc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tcc01100]
tcc_M00012  Glyoxylate cycle [PATH:tcc01100]
tcc_M00015  Proline biosynthesis, glutamate => proline [PATH:tcc01100]
tcc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:tcc01100]
tcc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:tcc01100]
tcc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:tcc01100]
tcc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:tcc01100]
tcc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tcc01100]
tcc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:tcc01100]
tcc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:tcc01100]
tcc_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:tcc01100]
tcc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:tcc01100]
tcc_M00034  Methionine salvage pathway [PATH:tcc01100]
tcc_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:tcc01100]
tcc_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:tcc01100]
tcc_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:tcc01100]
tcc_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:tcc01100]
tcc_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:tcc01100]
tcc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:tcc01100]
tcc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tcc01100]
tcc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:tcc01100]
tcc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tcc01100]
tcc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:tcc01100]
tcc_M00055  N-glycan precursor biosynthesis [PATH:tcc01100]
tcc_M00073  N-glycan precursor trimming [PATH:tcc01100]
tcc_M00081  Pectin degradation [PATH:tcc01100]
tcc_M00082  Fatty acid biosynthesis, initiation [PATH:tcc01100]
tcc_M00083  Fatty acid biosynthesis, elongation [PATH:tcc01100]
tcc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:tcc01100]
tcc_M00087  beta-Oxidation [PATH:tcc01100]
tcc_M00089  Triacylglycerol biosynthesis [PATH:tcc01100]
tcc_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:tcc01100]
tcc_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:tcc01100]
tcc_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:tcc01100]
tcc_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:tcc01100]
tcc_M00098  Acylglycerol degradation [PATH:tcc01100]
tcc_M00100  Sphingosine degradation [PATH:tcc01100]
tcc_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:tcc01100]
tcc_M00113  Jasmonic acid biosynthesis [PATH:tcc01100]
tcc_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:tcc01100]
tcc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:tcc01100]
tcc_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:tcc01100]
tcc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:tcc01100]
tcc_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:tcc01100]
tcc_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tcc01100]
tcc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:tcc01100]
tcc_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:tcc01100]
tcc_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:tcc01100]
tcc_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:tcc01100]
tcc_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:tcc01100]
tcc_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:tcc01100]
tcc_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:tcc01100]
tcc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:tcc01100]
tcc_M00161  Photosystem II [PATH:tcc01100]
tcc_M00163  Photosystem I [PATH:tcc01100]
tcc_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:tcc01100]
tcc_M00168  CAM (Crassulacean acid metabolism), dark [PATH:tcc01100]
tcc_M00169  CAM (Crassulacean acid metabolism), light [PATH:tcc01100]
tcc_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:tcc01100]
tcc_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:tcc01100]
tcc_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:tcc01100]
tcc_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:tcc01100]
tcc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tcc01100]
tcc_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:tcc01100]
tcc_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:tcc01100]
tcc_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:tcc01100]
tcc_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:tcc01100]
tcc_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:tcc01100]
tcc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:tcc01100]
tcc_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:tcc01100]
tcc_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:tcc01100]
tcc_M00532  Photorespiration [PATH:tcc01100]
tcc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:tcc01100]
tcc_M00555  Betaine biosynthesis, choline => betaine [PATH:tcc01100]
tcc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:tcc01100]
tcc_M00621  Glycine cleavage system [PATH:tcc01100]
tcc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:tcc01100]
tcc_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:tcc01100]
tcc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tcc01100]
tcc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:tcc01100]
tcc_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:tcc01100]
tcc_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:tcc01100]
tcc_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:tcc01100]
tcc_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:tcc01100]
tcc_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:tcc01100]
tcc_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:tcc01100]
tcc_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:tcc01100]
tcc_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:tcc01100]
tcc_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:tcc01100]
tcc_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:tcc01100]
tcc_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:tcc01100]
tcc_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:tcc01100]
tcc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:tcc01100]
tcc_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:tcc01100]
tcc_M00970  Proline degradation, proline => glutamate [PATH:tcc01100]
tcc_M00972  Proline metabolism [PATH:tcc01100]
Organism
Theobroma cacao (cacao) [GN:tcc]
Related
pathway
tcc00010  Glycolysis / Gluconeogenesis
tcc00020  Citrate cycle (TCA cycle)
tcc00030  Pentose phosphate pathway
tcc00040  Pentose and glucuronate interconversions
tcc00051  Fructose and mannose metabolism
tcc00052  Galactose metabolism
tcc00053  Ascorbate and aldarate metabolism
tcc00061  Fatty acid biosynthesis
tcc00062  Fatty acid elongation
tcc00071  Fatty acid degradation
tcc00073  Cutin, suberine and wax biosynthesis
tcc00100  Steroid biosynthesis
tcc00130  Ubiquinone and other terpenoid-quinone biosynthesis
tcc00190  Oxidative phosphorylation
tcc00195  Photosynthesis
tcc00196  Photosynthesis - antenna proteins
tcc00220  Arginine biosynthesis
tcc00230  Purine metabolism
tcc00232  Caffeine metabolism
tcc00240  Pyrimidine metabolism
tcc00250  Alanine, aspartate and glutamate metabolism
tcc00260  Glycine, serine and threonine metabolism
tcc00261  Monobactam biosynthesis
tcc00270  Cysteine and methionine metabolism
tcc00280  Valine, leucine and isoleucine degradation
tcc00290  Valine, leucine and isoleucine biosynthesis
tcc00300  Lysine biosynthesis
tcc00310  Lysine degradation
tcc00330  Arginine and proline metabolism
tcc00340  Histidine metabolism
tcc00350  Tyrosine metabolism
tcc00360  Phenylalanine metabolism
tcc00380  Tryptophan metabolism
tcc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
tcc00410  beta-Alanine metabolism
tcc00430  Taurine and hypotaurine metabolism
tcc00440  Phosphonate and phosphinate metabolism
tcc00450  Selenocompound metabolism
tcc00460  Cyanoamino acid metabolism
tcc00470  D-Amino acid metabolism
tcc00480  Glutathione metabolism
tcc00500  Starch and sucrose metabolism
tcc00510  N-Glycan biosynthesis
tcc00511  Other glycan degradation
tcc00513  Various types of N-glycan biosynthesis
tcc00514  Other types of O-glycan biosynthesis
tcc00520  Amino sugar and nucleotide sugar metabolism
tcc00531  Glycosaminoglycan degradation
tcc00543  Exopolysaccharide biosynthesis
tcc00561  Glycerolipid metabolism
tcc00562  Inositol phosphate metabolism
tcc00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
tcc00564  Glycerophospholipid metabolism
tcc00565  Ether lipid metabolism
tcc00590  Arachidonic acid metabolism
tcc00591  Linoleic acid metabolism
tcc00592  alpha-Linolenic acid metabolism
tcc00600  Sphingolipid metabolism
tcc00601  Glycosphingolipid biosynthesis - lacto and neolacto series
tcc00603  Glycosphingolipid biosynthesis - globo and isoglobo series
tcc00604  Glycosphingolipid biosynthesis - ganglio series
tcc00620  Pyruvate metabolism
tcc00630  Glyoxylate and dicarboxylate metabolism
tcc00640  Propanoate metabolism
tcc00650  Butanoate metabolism
tcc00660  C5-Branched dibasic acid metabolism
tcc00670  One carbon pool by folate
tcc00710  Carbon fixation in photosynthetic organisms
tcc00730  Thiamine metabolism
tcc00740  Riboflavin metabolism
tcc00750  Vitamin B6 metabolism
tcc00760  Nicotinate and nicotinamide metabolism
tcc00770  Pantothenate and CoA biosynthesis
tcc00780  Biotin metabolism
tcc00785  Lipoic acid metabolism
tcc00790  Folate biosynthesis
tcc00860  Porphyrin metabolism
tcc00900  Terpenoid backbone biosynthesis
tcc00902  Monoterpenoid biosynthesis
tcc00904  Diterpenoid biosynthesis
tcc00905  Brassinosteroid biosynthesis
tcc00906  Carotenoid biosynthesis
tcc00908  Zeatin biosynthesis
tcc00909  Sesquiterpenoid and triterpenoid biosynthesis
tcc00910  Nitrogen metabolism
tcc00920  Sulfur metabolism
tcc00940  Phenylpropanoid biosynthesis
tcc00941  Flavonoid biosynthesis
tcc00942  Anthocyanin biosynthesis
tcc00943  Isoflavonoid biosynthesis
tcc00944  Flavone and flavonol biosynthesis
tcc00950  Isoquinoline alkaloid biosynthesis
tcc00960  Tropane, piperidine and pyridine alkaloid biosynthesis
tcc00965  Betalain biosynthesis
tcc00966  Glucosinolate biosynthesis
tcc00999  Biosynthesis of various plant secondary metabolites
tcc01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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