KEGG   PATHWAY: vhl00230
Entry
vhl00230                    Pathway                                
Name
Purine metabolism - Virgibacillus halodenitrificans
Class
Metabolism; Nucleotide metabolism
Pathway map
vhl00230  Purine metabolism
vhl00230

Module
vhl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vhl00230]
vhl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vhl00230]
vhl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vhl00230]
vhl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vhl00230]
vhl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vhl00230]
Other DBs
GO: 0006163 0042278
Organism
Virgibacillus halodenitrificans [GN:vhl]
Gene
BME96_09410  ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
BME96_09440  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
BME96_17135  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BME96_00350  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BME96_02780  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
BME96_02800  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
BME96_02790  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
BME96_02775  phosphoribosylformylglycinamidine synthase II [KO:K23269] [EC:6.3.5.3]
BME96_02765  phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
BME96_02770  phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
BME96_02785  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
BME96_02750  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
BME96_02745  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
BME96_02760  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
BME96_17875  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
BME96_02755  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
BME96_02795  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
BME96_08230  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
BME96_12385  metallophosphoesterase [KO:K01081] [EC:3.1.3.5]
BME96_09445  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
BME96_12250  purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
BME96_11155  hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
BME96_13150  nucleoside hydrolase [KO:K01239] [EC:3.2.2.1]
BME96_00445  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
BME96_00055  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
BME96_09730  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
BME96_07275  yjjX; inosine/xanthosine triphosphatase [KO:K01529] [EC:3.6.1.73]
BME96_07900  non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
BME96_03875  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
BME96_02705  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
BME96_14360  GMP reductase [KO:K00364] [EC:1.7.1.7]
BME96_15070  guanine deaminase [KO:K01487] [EC:3.5.4.3]
BME96_01795  tRNA-specific adenosine deaminase [KO:K01487] [EC:3.5.4.3]
BME96_11035  guanylate kinase [KO:K00942] [EC:2.7.4.8]
BME96_17475  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BME96_09130  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
BME96_17465  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BME96_00125  deoxynucleoside kinase [KO:K15518] [EC:2.7.1.113]
BME96_01885  phosphohydrolase [KO:K21138] [EC:3.1.7.2]
BME96_08235  (p)ppGpp synthetase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
BME96_00105  GTP pyrophosphokinase [KO:K07816] [EC:2.7.6.5]
BME96_04770  GTP pyrophosphokinase [KO:K07816] [EC:2.7.6.5]
BME96_18745  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
BME96_00120  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
BME96_02805  adenosine deaminase [KO:K01486] [EC:3.5.4.2]
BME96_10385  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
BME96_00830  adenylate kinase [KO:K00939] [EC:2.7.4.3]
BME96_03925  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
BME96_18420  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
vhl00030  Pentose phosphate pathway
vhl00220  Arginine biosynthesis
vhl00250  Alanine, aspartate and glutamate metabolism
vhl00260  Glycine, serine and threonine metabolism
vhl00340  Histidine metabolism
vhl00630  Glyoxylate and dicarboxylate metabolism
vhl00730  Thiamine metabolism
vhl00740  Riboflavin metabolism
vhl00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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