KEGG   PATHWAY: vve04120
Entry
vve04120                    Pathway                                
Name
Ubiquitin mediated proteolysis - Vespa velutina (Asian hornet)
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
vve04120  Ubiquitin mediated proteolysis
vve04120

Other DBs
GO: 0016567
Organism
Vespa velutina (Asian hornet) [GN:vve]
Gene
124955794  polyubiquitin-B [KO:K04551]
124948045  polyubiquitin-A isoform X1 [KO:K08770]
124952780  ubiquitin-60S ribosomal protein L40 [KO:K02927]
124948693  ubiquitin-40S ribosomal protein S27a [KO:K02977]
124950898  ubiquitin-40S ribosomal protein S27a-like isoform X1 [KO:K02977]
124950351  ubiquitin-like modifier-activating enzyme 1 [KO:K03178] [EC:6.2.1.45]
124951008  SUMO-activating enzyme subunit 1 isoform X1 [KO:K10684] [EC:6.2.1.45]
124950689  SUMO-activating enzyme subunit 2 isoform X1 [KO:K10685] [EC:6.2.1.45]
124955401  NEDD8-activating enzyme E1 catalytic subunit [KO:K10686] [EC:6.2.1.64]
124949697  ubiquitin-conjugating enzyme E2-17 kDa isoform X1 [KO:K10573] [EC:2.3.2.23]
124952272  ubiquitin-conjugating enzyme E2 C isoform X1 [KO:K06688] [EC:2.3.2.23]
124952517  ubiquitin-conjugating enzyme E2-17 kDa [KO:K06689] [EC:2.3.2.23]
124947612  ubiquitin-conjugating enzyme E2-24 kDa isoform X1 [KO:K20217] [EC:2.3.2.23]
124951906  NEDD8-conjugating enzyme UBE2F-like isoform X1 [KO:K10687] [EC:2.3.2.34]
124956021  ubiquitin-conjugating enzyme E2 G1 [KO:K10575] [EC:2.3.2.23]
124947265  ubiquitin-conjugating enzyme E2 G2 isoform X1 [KO:K04555] [EC:2.3.2.23]
124951277  ubiquitin-conjugating enzyme E2 H [KO:K10576] [EC:2.3.2.23]
124957149  SUMO-conjugating enzyme UBC9-B [KO:K10577]
124951397  ubiquitin-conjugating enzyme E2 J1-like [KO:K10578] [EC:2.3.2.23]
124956278  ubiquitin-conjugating enzyme E2 J2 isoform X1 [KO:K04554] [EC:2.3.2.23]
124954302  ubiquitin-conjugating enzyme E2-22 kDa isoform X1 [KO:K04649] [EC:2.3.2.23]
124952156  ubiquitin-conjugating enzyme E2 L3-like isoform X1 [KO:K04552] [EC:2.3.2.23]
124947468  NEDD8-conjugating enzyme Ubc12 [KO:K10579] [EC:2.3.2.34]
124947165  ubiquitin-conjugating enzyme E2 N [KO:K10580] [EC:2.3.2.23]
124955546  (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O [KO:K10581] [EC:2.3.2.24]
124955741  ubiquitin-conjugating enzyme E2Q-like protein CG4502 isoform X1 [KO:K10582] [EC:2.3.2.23]
124949374  ubiquitin-conjugating enzyme E2 Q2 [KO:K10582] [EC:2.3.2.23]
124946532  ubiquitin-conjugating enzyme E2 R2 [KO:K02207] [EC:2.3.2.23]
124953348  ubiquitin-conjugating enzyme E2 S isoform X1 [KO:K10583] [EC:2.3.2.23]
124957855  ubiquitin-conjugating enzyme E2 W [KO:K10688] [EC:2.3.2.23 2.3.2.25]
124947146  baculoviral IAP repeat-containing protein 6 isoform X1 [KO:K10586] [EC:2.3.2.23]
124956944  ubiquitin-protein ligase E3A isoform X1 [KO:K10587] [EC:2.3.2.26]
124953827  ubiquitin-protein ligase E3B isoform X1 [KO:K10588] [EC:2.3.2.26]
124954856  ubiquitin-protein ligase E3C [KO:K10589] [EC:2.3.2.26]
124948230  E3 ubiquitin-protein ligase SMURF2 isoform X1 [KO:K04678] [EC:2.3.2.26]
124955023  E3 ubiquitin-protein ligase Su(dx) [KO:K05633] [EC:2.3.2.26]
124956984  E3 ubiquitin-protein ligase TRIP12 isoform X1 [KO:K10590] [EC:2.3.2.26]
124953201  E3 ubiquitin-protein ligase Nedd-4 isoform X1 [KO:K10591] [EC:2.3.2.26]
124952379  E3 ubiquitin-protein ligase HUWE1 isoform X1 [KO:K10592] [EC:2.3.2.26]
124951916  E3 ubiquitin-protein ligase UBR5 isoform X1 [KO:K10593] [EC:2.3.2.26]
124946577  E3 ubiquitin-protein ligase HERC2 isoform X1 [KO:K10595] [EC:2.3.2.26]
124955820  probable E3 ubiquitin-protein ligase HERC4 isoform X1 [KO:K10615] [EC:2.3.2.26]
124952518  ubiquitin conjugation factor E4 A [KO:K10596] [EC:2.3.2.27]
124952702  ubiquitin conjugation factor E4 B [KO:K10597] [EC:2.3.2.27]
124947010  E3 ubiquitin-protein ligase CHIP [KO:K09561] [EC:2.3.2.27]
124947606  RING-type E3 ubiquitin-protein ligase PPIL2 [KO:K10598] [EC:5.2.1.8]
124953956  pre-mRNA-processing factor 19 [KO:K10599] [EC:2.3.2.27]
124949241  RING finger protein 37 [KO:K10600]
124946603  E3 ubiquitin-protein ligase CBL-B-B isoform X1 [KO:K04707] [EC:2.3.2.27]
124957686  E3 ubiquitin-protein ligase parkin [KO:K04556] [EC:2.3.2.31]
124950984  E3 ubiquitin-protein ligase SIAH1-like isoform X1 [KO:K04506] [EC:2.3.2.27]
124947452  TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
124949355  RING finger and CHY zinc finger domain-containing protein 1 [KO:K10144] [EC:2.3.2.27]
124955219  baculoviral IAP repeat-containing protein 7-like isoform X1 [KO:K16060]
124951285  baculoviral IAP repeat-containing protein 8-like isoform X1 [KO:K16061]
124955222  baculoviral IAP repeat-containing protein 7-B-like [KO:K16061]
124949463  putative inhibitor of apoptosis [KO:K16061]
124950224  E3 SUMO-protein ligase PIAS2 isoform X1 [KO:K04706] [EC:2.3.2.-]
124950454  E3 ubiquitin-protein ligase synoviolin A [KO:K10601] [EC:2.3.2.27]
124950421  E3 ubiquitin-protein ligase FANCL isoform X1 [KO:K10606] [EC:2.3.2.27]
124947157  uncharacterized protein LOC124947157 isoform X1 [KO:K10608] [EC:2.3.2.27]
124955442  RING-box protein 1A [KO:K03868] [EC:2.3.2.32]
124951227  cullin-1 [KO:K03347]
124957285  S-phase kinase-associated protein 1 [KO:K03094]
124953161  beta-TrCP isoform X1 [KO:K03362]
124951699  S-phase kinase-associated protein 2-like isoform X1 [KO:K03875]
124951703  S-phase kinase-associated protein 2-like isoform X1 [KO:K03875]
124952132  F-box/WD repeat-containing protein 7 [KO:K10260]
124950565  cullin-2 [KO:K03870]
124948448  elongin-C isoform X1 [KO:K03872]
124949161  elongin-B [KO:K03873]
124954999  von Hippel-Lindau disease tumor suppressor [KO:K03871]
124952144  cullin-3 [KO:K03869]
124946713  kelch-like ECH-associated protein 1B isoform X1 [KO:K10456]
124949182  rho-related BTB domain-containing protein 1 isoform X1 [KO:K07868]
124951405  cullin-4A [KO:K10609]
124950347  DNA damage-binding protein 1 [KO:K10610]
124947480  DET1 homolog [KO:K10571]
124952571  RING-box protein 2 [KO:K10611]
124955417  cullin-5 [KO:K10612]
124956719  anaphase-promoting complex subunit 11 [KO:K03358]
124948301  anaphase-promoting complex subunit 2 [KO:K03349]
124955115  cell division cycle protein 20 homolog isoform X1 [KO:K03363]
124952212  fizzy-related protein homolog [KO:K03364]
124950144  anaphase-promoting complex subunit 1 isoform X1 [KO:K03348]
124948121  cell division cycle protein 27 homolog isoform X1 [KO:K03350]
124956870  anaphase-promoting complex subunit 4 [KO:K03351]
124956959  anaphase-promoting complex subunit 5 [KO:K03352]
124953713  cell division cycle protein 16 homolog isoform X1 [KO:K03353]
124952054  anaphase-promoting complex subunit 7 [KO:K03354]
124949460  cell division cycle protein 23 homolog isoform X1 [KO:K03355]
124950851  anaphase-promoting complex subunit 10 [KO:K03357]
124955525  anaphase-promoting complex subunit 13 [KO:K12456]
124953641  anaphase-promoting complex subunit 15 [KO:K25228]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
vve03050  Proteasome
KO pathway
ko04120   
LinkDB

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