KEGG   PATHWAY: zma03020
Entry
zma03020                    Pathway                                
Name
RNA polymerase - Zea mays (maize)
Class
Genetic Information Processing; Transcription
Pathway map
zma03020  RNA polymerase
zma03020

Other DBs
GO: 0000428
Organism
Zea mays (maize) [GN:zma]
Gene
845225  rpoB; RNA polymerase beta subunit [KO:K03043] [EC:2.7.7.6]
845226  rpoC1; RNA polymerase beta' subunit [KO:K03046] [EC:2.7.7.6]
845227  rpoC2; RNA polymerase beta'' subunit [KO:K03046] [EC:2.7.7.6]
109943315  DNA-directed RNA polymerase subunit beta'-like [KO:K03046] [EC:2.7.7.6]
118473518  DNA-directed RNA polymerase subunit beta''-like [KO:K03046] [EC:2.7.7.6]
118473634  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118473788  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118473918  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118473920  DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
118474818  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118475062  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118475748  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118475928  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
118475931  DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
845224  rpoA; RNA polymerase alpha subunit [KO:K03040] [EC:2.7.7.6]
118472117  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
100277195  uncharacterized protein LOC100277195 [KO:K03010] [EC:2.7.7.6]
103626041  DNA-directed RNA polymerase II subunit RPB2 [KO:K03010] [EC:2.7.7.6]
103628156  LOW QUALITY PROTEIN: uncharacterized protein LOC103628156 [KO:K03010] [EC:2.7.7.6]
541967  DNA-directed RNA polymerase II subunit 1 [KO:K03006] [EC:2.7.7.6]
100282883  uncharacterized protein LOC100282883 [KO:K03011]
100274213  DNA-directed RNA polymerase II subunit J [KO:K03008]
103627413  DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [KO:K03008]
103627418  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
109939580  DNA-directed RNA polymerases II, IV and V subunit 11-like isoform X1 [KO:K03008]
103627422  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
103627414  DNA-directed RNA polymerases II, IV and V subunit 11-like isoform X1 [KO:K03008]
109939981  DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [KO:K03008]
109939982  DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [KO:K03008]
100282338  DNA-directed RNA polymerase II 16 kDa polypeptide [KO:K03012]
100191330  uncharacterized protein LOC100191330 [KO:K03012]
100283223  DNA-directed RNA polymerase II 19 kDa polypeptide [KO:K03015]
100284267  uncharacterized protein LOC100284267 [KO:K03017]
103646824  DNA-directed RNA polymerases II, IV and V subunit 9A [KO:K03017]
100285329  DNA-directed RNA polymerase II 14.5 kDa polypeptide [KO:K03017]
103646285  DNA-directed RNA polymerase III subunit 1 [KO:K03018] [EC:2.7.7.6]
100276725  uncharacterized protein LOC100276725 [KO:K03020]
100191943  uncharacterized protein LOC100191943 [KO:K03027]
103651514  uncharacterized protein LOC103651514 [KO:K03023]
118474729  LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC3-like [KO:K03023]
100283887  uncharacterized protein LOC100283887 [KO:K03026]
100193764  uncharacterized protein LOC100193764 [KO:K03026]
103655244  uncharacterized protein LOC103655244 [KO:K03026]
103629388  uncharacterized protein LOC103629388 [KO:K14721]
100281261  uncharacterized protein LOC100281261 [KO:K03025]
100284691  uncharacterized protein LOC100284691 [KO:K03025]
100382351  uncharacterized protein LOC100382351 [KO:K03025]
100276973  uncharacterized protein LOC100276973 [KO:K03024]
100281221  DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide [KO:K03022]
109943977  DNA-directed RNA polymerase III subunit RPC9-like [KO:K25304]
100280798  uncharacterized protein LOC100280798 [KO:K25304]
109939175  uncharacterized protein LOC109939175 [KO:K25304]
109943978  uncharacterized protein LOC109943978 [KO:K25304]
100193056  uncharacterized protein LOC100193056 [KO:K03019]
103643410  DNA-directed RNA polymerase I subunit 2 [KO:K03002] [EC:2.7.7.6]
100279825  DNA-directed RNA polymerase I subunit 1 isoform X1 [KO:K02999] [EC:2.7.7.6]
101027179  histone-like transcription factor and archaeal histone family protein [KO:K03004]
100284469  uncharacterized protein LOC100284469 [KO:K03005]
100193880  uncharacterized protein LOC100193880 [KO:K03013]
100273250  uncharacterized protein LOC100273250 [KO:K03013]
100273995  uncharacterized protein LOC100273995 [KO:K03013]
100282532  DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide [KO:K03014]
100283558  uncharacterized protein LOC100283558 [KO:K03014]
100281008  uncharacterized protein LOC100281008 [KO:K03016]
100284471  DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide [KO:K03009]
100285004  uncharacterized protein LOC100285004 [KO:K03009]
100286035  uncharacterized protein LOC100286035 [KO:K03007]
100281783  DNA-directed RNA polymerase II 8.2 kDa polypeptide [KO:K03007]
113633883  uncharacterized protein LOC113633883 [KO:K03007]
100501057  DNA dependent RNA polymerase D largest subunit [KO:K16250] [EC:2.7.7.6]
103654914  DNA-directed RNA polymerase V subunit 1 [KO:K16251] [EC:2.7.7.6]
100037782  required to maintain repression 7 [KO:K16252] [EC:2.7.7.6]
103641221  DNA-directed RNA polymerases IV and V subunit 2 [KO:K16252] [EC:2.7.7.6]
100284005  uncharacterized protein LOC100284005 [KO:K16253]
Reference
PMID:10499798
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
PMID:10784442
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
PMID:19880312
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
PMID:18573085
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
Reference
PMID:31835031
  Authors
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
  Title
Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
  Journal
Cell 179:1525-1536.e12 (2019)
DOI:10.1016/j.cell.2019.11.023
KO pathway
ko03020   
LinkDB

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