KEGG   PATHWAY: pnr00230
Entry
pnr00230                    Pathway                                
Name
Purine metabolism - Pandoraea norimbergensis
Class
Metabolism; Nucleotide metabolism
Pathway map
pnr00230  Purine metabolism
pnr00230

Module
pnr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pnr00230]
pnr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pnr00230]
pnr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pnr00230]
pnr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pnr00230]
pnr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pnr00230]
pnr_M00546  Purine degradation, xanthine => urea [PATH:pnr00230]
pnr_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pnr00230]
pnr_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pnr00230]
Other DBs
GO: 0006163 0042278
Organism
Pandoraea norimbergensis [GN:pnr]
Gene
AT302_24605  ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
AT302_27060  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
AT302_04425  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
AT302_11015  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
AT302_24330  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
AT302_02220  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
AT302_02700  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
AT302_23715  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
AT302_18330  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
AT302_03050  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
AT302_14040  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
AT302_14035  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
AT302_14030  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
AT302_13065  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
AT302_04825  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
AT302_11110  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
AT302_12600  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
AT302_24030  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AT302_02925  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
AT302_17740  hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
AT302_05105  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
AT302_22200  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
AT302_23995  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
AT302_16805  non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
AT302_15250  xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
AT302_15245  xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
AT302_22960  aldehyde oxidase [KO:K11177] [EC:1.17.1.4]
AT302_22965  xanthine dehydrogenase [KO:K11178] [EC:1.17.1.4]
AT302_22970  xanthine dehydrogenase [KO:K13483]
AT302_17725  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
AT302_22190  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
AT302_15225  guanine deaminase [KO:K01487] [EC:3.5.4.3]
AT302_16820  guanylate kinase [KO:K00942] [EC:2.7.4.8]
AT302_05075  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
AT302_05065  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
AT302_06265  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
AT302_16830  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
AT302_15745  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
AT302_17230  GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
AT302_10820  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
AT302_23925  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
AT302_05050  sugar kinase [KO:K00856] [EC:2.7.1.20]
AT302_01180  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
AT302_15235  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
AT302_02880  adenylate kinase [KO:K00939] [EC:2.7.4.3]
AT302_15115  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
AT302_21880  hypothetical protein [KO:K03651] [EC:3.1.4.53]
AT302_04460  bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [KO:K01525] [EC:3.6.1.41]
AT302_00955  sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
AT302_00960  sulfate adenylyltransferase small subunit [KO:K00957] [EC:2.7.7.4]
AT302_13500  FAD-dependent oxidoreductase [KO:K22879] [EC:1.14.13.113]
AT302_21980  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
AT302_22025  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
AT302_19830  Asp/Glu/hydantoin racemase [KO:K16841] [EC:5.1.99.3]
AT302_19125  Asp/Glu/hydantoin racemase [KO:K16841] [EC:5.1.99.3]
AT302_26990  allantoinase [KO:K01466] [EC:3.5.2.5]
AT302_22030  allantoinase [KO:K16842] [EC:3.5.2.5]
AT302_15630  allantoicase [KO:K01477] [EC:3.5.3.4]
AT302_22020  allantoicase [KO:K01477] [EC:3.5.3.4]
AT302_19165  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
AT302_15625  ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
AT302_22015  ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
AT302_09470  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
AT302_09475  urease subunit beta [KO:K01429] [EC:3.5.1.5]
AT302_09485  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
AT302_00235  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
AT302_19155  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pnr00030  Pentose phosphate pathway
pnr00220  Arginine biosynthesis
pnr00250  Alanine, aspartate and glutamate metabolism
pnr00260  Glycine, serine and threonine metabolism
pnr00340  Histidine metabolism
pnr00630  Glyoxylate and dicarboxylate metabolism
pnr00730  Thiamine metabolism
pnr00740  Riboflavin metabolism
pnr00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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