KEGG   PATHWAY: psf00230
Entry
psf00230                    Pathway                                
Name
Purine metabolism - Pseudovibrio sp. FO-BEG1
Class
Metabolism; Nucleotide metabolism
Pathway map
psf00230  Purine metabolism
psf00230

Module
psf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:psf00230]
psf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:psf00230]
psf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:psf00230]
psf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:psf00230]
psf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:psf00230]
psf_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:psf00230]
psf_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:psf00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudovibrio sp. FO-BEG1 [GN:psf]
Gene
PSE_1044  deoB; Phosphopentomutase [KO:K01839] [EC:5.4.2.7]
PSE_2526  algC; Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PSE_4437  prs; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
PSE_2709  Amidophosphoribosyl transferase [KO:K00764] [EC:2.4.2.14]
PSE_1529  purD; Phosphoribosylglycinamide synthetase [KO:K01945] [EC:6.3.4.13]
PSE_2765  Phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
PSE_4049  purL; Phosphoribosylformylglycinamidine synthase 2 [KO:K23269] [EC:6.3.5.3]
PSE_4040  Phosphoribosylformylglycinamidine synthetase, PurS subunit [KO:K23264] [EC:6.3.5.3]
PSE_4042  phosphoribosylformylglycinamidine synthase subunit I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
PSE_2766  phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
PSE_4737  purK; Phosphoribosylaminoimidazole carboxylase ATPase subunit [KO:K01589] [EC:6.3.4.18]
PSE_4736  purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit [KO:K01588] [EC:5.4.99.18]
PSE_4039  purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
PSE_4753  purB; Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
PSE_0226  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
PSE_4446  apt; Adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
PSE_1783  Ser/Thr protein phosphatase/nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
PSE_3236  stationary-phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
PSE_1041  punA; Purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
PSE_0787  deoD; Purine nucleoside phosphorylase deoD-type [KO:K03784] [EC:2.4.2.1]
PSE_4434  Multi-copper polyphenol oxidoreductase, laccase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
PSE_0249  hpt; Hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
PSE_2688  inositol-5-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
PSE_2747  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
PSE_3616  NTPase [KO:K01529] [EC:3.6.1.73]
PSE_0369  ntpA; Nucleoside-triphosphatase [KO:K01519] [EC:3.6.1.66]
PSE_3989  xanthine-guanine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
PSE_3182  xanthine dehydrogenase, XdhA subunit [KO:K13481] [EC:1.17.1.4]
PSE_3181  xanthine dehydrogenase protein [KO:K13482] [EC:1.17.1.4]
PSE_1443  glutamine amidotransferase class-I [KO:K01951] [EC:6.3.5.2]
PSE_2697  GMP synthase [KO:K01951] [EC:6.3.5.2]
PSE_4864  glutamine amidotransferase class-I [KO:K01951] [EC:6.3.5.2]
PSE_0820  guaD; Guanine deaminase [KO:K01487] [EC:3.5.4.3]
PSE_2724  gmk; Guanylate kinase [KO:K00942] [EC:2.7.4.8]
PSE_2994  nrdJ; Vitamin B12-dependent ribonucleotide reductase (Ribonucleoside-diphosphate reductase nrdJ) [KO:K00525] [EC:1.17.4.1]
PSE_2332  nrdE; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
PSE_2333  nrdF; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
PSE_0462  Deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PSE_1699  Deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
PSE_3247  Deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
PSE_1630  metal dependent phosphohydrolase [KO:K06952] [EC:3.1.3.89]
PSE_3605  bifunctional: (p)ppGpp synthetase II guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
PSE_2685  phosphatase, Ppx/GppA family [KO:K01524] [EC:3.6.1.11 3.6.1.40]
PSE_2770  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
PSE_2743  protein containing RelA/SpoT domain [KO:K07816] [EC:2.7.6.5]
PSE_2492  Adenylate cyclase 1 [KO:K01768] [EC:4.6.1.1]
PSE_2506  adenylate/guanylate cyclase [KO:K01768] [EC:4.6.1.1]
PSE_1433  adenylate cyclase 1 [KO:K01768] [EC:4.6.1.1]
PSE_4663  Adenylate cyclase 1 [KO:K01768] [EC:4.6.1.1]
PSE_3818  adenylate/guanylate cyclase [KO:K01768] [EC:4.6.1.1]
PSE_2069  adenylate cyclase CyaB [KO:K05873] [EC:4.6.1.1]
PSE_4667  Adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
PSE_1046  add; Adenosine deaminase [KO:K01488] [EC:3.5.4.4]
PSE_2122  add; Adenosine deaminase [KO:K01488] [EC:3.5.4.4]
PSE_1587  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
PSE_4144  ade; Adenine deaminase [KO:K01486] [EC:3.5.4.2]
PSE_0744  bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
PSE_2573  2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
PSE_4691  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
PSE_3858  adk; Adenylate kinase [KO:K00939] [EC:2.7.4.3]
PSE_3266  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
PSE_4376  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
PSE_1412  Ser/Thr protein phosphatase family protein [KO:K03651] [EC:3.1.4.53]
PSE_3204  bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [KO:K00955] [EC:2.7.7.4 2.7.1.25]
PSE_3205  cysD; Sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
PSE_3183  Hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
PSE_3174  polysaccharide deacetylase [KO:K13485] [EC:4.1.1.97]
PSE_2675  polysaccharide deacetylase family protein [KO:K16842] [EC:3.5.2.5]
PSE_0753  hypothetical protein [KO:K14977] [EC:3.5.3.26]
PSE_0752  allA; Ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
PSE_2971  ureC; Urease subunit alpha [KO:K01428] [EC:3.5.1.5]
PSE_2970  ureB; Urease subunit beta [KO:K01429] [EC:3.5.1.5]
PSE_2969  ureA; Urease subunit gamma [KO:K01430] [EC:3.5.1.5]
PSE_1307  arcC; Bacterial carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
psf00030  Pentose phosphate pathway
psf00220  Arginine biosynthesis
psf00250  Alanine, aspartate and glutamate metabolism
psf00260  Glycine, serine and threonine metabolism
psf00340  Histidine metabolism
psf00630  Glyoxylate and dicarboxylate metabolism
psf00730  Thiamine metabolism
psf00740  Riboflavin metabolism
psf00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system