KEGG   PATHWAY: rcp00230
Entry
rcp00230                    Pathway                                
Name
Purine metabolism - Rhodobacter capsulatus
Class
Metabolism; Nucleotide metabolism
Pathway map
rcp00230  Purine metabolism
rcp00230

Module
rcp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rcp00230]
rcp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rcp00230]
rcp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rcp00230]
rcp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rcp00230]
rcp_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rcp00230]
rcp_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rcp00230]
Other DBs
GO: 0006163 0042278
Organism
Rhodobacter capsulatus [GN:rcp]
Gene
RCAP_rcc00048  [KO:K06952] [EC:3.1.3.89]
RCAP_rcc00250  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
RCAP_rcc00251  ade; adenine deaminase [KO:K01486] [EC:3.5.4.2]
RCAP_rcc00271  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
RCAP_rcc00323  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
RCAP_rcc00446  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
RCAP_rcc00549  purL; phosphoribosylformylglycinamidine synthase II [KO:K23269]
RCAP_rcc00600  nrdJ1; ribonucleoside-diphosphate reductase NrdJ-1 (adenosylcobalamin-dependen) [KO:K00525] [EC:1.17.4.1]
RCAP_rcc00752  purA; adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
RCAP_rcc00791  xdhB; xanthine dehydrogenase, molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
RCAP_rcc00792  xdhA; xanthine dehydrogenase, small subunit [KO:K13481] [EC:1.17.1.4]
RCAP_rcc00809  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
RCAP_rcc00876  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
RCAP_rcc00881  [KO:K09769] [EC:3.1.4.16]
RCAP_rcc01218  ureA; urease, gamma subunit [KO:K01430] [EC:3.5.1.5]
RCAP_rcc01219  ureB; urease, beta subunit [KO:K01429] [EC:3.5.1.5]
RCAP_rcc01220  ureC; urease, alpha subunit [KO:K01428] [EC:3.5.1.5]
RCAP_rcc01360  [KO:K01768] [EC:4.6.1.1]
RCAP_rcc01462  nrdJ2; ribonucleoside-diphosphate reductase NrdJ-2 (adenosylcobalamin-dependen) [KO:K00525] [EC:1.17.4.1]
RCAP_rcc01488  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
RCAP_rcc01489  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
RCAP_rcc01569  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
RCAP_rcc01617  gppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
RCAP_rcc01720  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
RCAP_rcc01779  [KO:K04765] [EC:3.6.1.9]
RCAP_rcc01790  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
RCAP_rcc01837  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
RCAP_rcc01847  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
RCAP_rcc01858  guaA1; GMP synthase-1 (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
RCAP_rcc01915  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
RCAP_rcc02030  allA; ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
RCAP_rcc02157  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
RCAP_rcc02168  purQ; phosphoribosylformylglycinamidine synthase, PurQ component [KO:K23265]
RCAP_rcc02169  purS; phosphoribosylformylglycinamidine synthase, PurS component [KO:K23264]
RCAP_rcc02170  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
RCAP_rcc02324  dgt; deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
RCAP_rcc02352  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
RCAP_rcc02393  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
RCAP_rcc02425  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
RCAP_rcc02447  hyuE; hydantoin racemase [KO:K16841] [EC:5.1.99.3]
RCAP_rcc02612  [KO:K07127] [EC:3.5.2.17]
RCAP_rcc02613  [KO:K16842] [EC:3.5.2.5]
RCAP_rcc02614  [KO:K14977] [EC:3.5.3.26]
RCAP_rcc02617  ushA; 5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
RCAP_rcc02805  [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
RCAP_rcc02816  sat; bifunctional sulfate adenylyltransferase/adenylyl-sulfate kinase [KO:K00958] [EC:2.7.7.4]
RCAP_rcc02820  purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
RCAP_rcc02821  purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
RCAP_rcc02823  prs; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
RCAP_rcc02956  nudF; ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
RCAP_rcc03092  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
RCAP_rcc03236  punA; purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
RCAP_rcc03317  spoT; GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
RCAP_rcc03342  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
RCAP_rcc03491  [KO:K01519] [EC:3.6.1.66]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rcp00030  Pentose phosphate pathway
rcp00220  Arginine biosynthesis
rcp00250  Alanine, aspartate and glutamate metabolism
rcp00260  Glycine, serine and threonine metabolism
rcp00340  Histidine metabolism
rcp00630  Glyoxylate and dicarboxylate metabolism
rcp00730  Thiamine metabolism
rcp00740  Riboflavin metabolism
rcp00790  Folate biosynthesis
KO pathway
ko00230   

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