KEGG   PATHWAY: rpa00230
Entry
rpa00230                    Pathway                                
Name
Purine metabolism - Rhodopseudomonas palustris CGA009
Class
Metabolism; Nucleotide metabolism
Pathway map
rpa00230  Purine metabolism
rpa00230

Module
rpa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rpa00230]
rpa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rpa00230]
rpa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rpa00230]
rpa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rpa00230]
Other DBs
GO: 0006163 0042278
Organism
Rhodopseudomonas palustris CGA009 [GN:rpa]
Gene
TX73_019105  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
TX73_007630  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
TX73_017170  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
TX73_021500  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
TX73_022610  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
TX73_015990  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
TX73_005965  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
TX73_015790  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
TX73_008205  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
TX73_019775  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
TX73_019765  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
TX73_015785  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
TX73_021645  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
TX73_021640  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
TX73_002890  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
TX73_019780  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
TX73_019760  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
TX73_000145  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
TX73_023325  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
TX73_004920  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
TX73_014710  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
TX73_022600  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
TX73_011355  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
TX73_015810  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
TX73_001705  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
TX73_011245  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
TX73_002175  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
TX73_011370  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
TX73_023695  GMP reductase [KO:K00364] [EC:1.7.1.7]
TX73_015070  nucleoside deaminase [KO:K01487] [EC:3.5.4.3]
TX73_015875  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
TX73_015440  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
TX73_014785  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
TX73_005475  HD family hydrolase [KO:K06952] [EC:3.1.3.89]
TX73_013955  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
TX73_011325  Ppx/GppA phosphatase family protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
TX73_015765  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
TX73_006175  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
TX73_008125  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
TX73_009240  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
TX73_011850  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
TX73_022255  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
TX73_023115  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
TX73_016700  adenylate kinase [KO:K00939] [EC:2.7.4.3]
TX73_014555  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
TX73_000645  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
TX73_007610  phosphodiesterase [KO:K03651] [EC:3.1.4.53]
TX73_003890  cysC; adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
TX73_003885  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
TX73_002865  bifunctional allantoicase/(S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
TX73_002870  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
TX73_018970  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
TX73_018980  urease subunit beta [KO:K01429] [EC:3.5.1.5]
TX73_018985  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rpa00030  Pentose phosphate pathway
rpa00220  Arginine biosynthesis
rpa00250  Alanine, aspartate and glutamate metabolism
rpa00260  Glycine, serine and threonine metabolism
rpa00340  Histidine metabolism
rpa00630  Glyoxylate and dicarboxylate metabolism
rpa00730  Thiamine metabolism
rpa00740  Riboflavin metabolism
rpa00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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