KEGG   PATHWAY: sly00310
Entry
sly00310                    Pathway                                
Name
Lysine degradation - Solanum lycopersicum (tomato)
Class
Metabolism; Amino acid metabolism
Pathway map
sly00310  Lysine degradation
sly00310

Other DBs
GO: 0006554
Organism
Solanum lycopersicum (tomato) [GN:sly]
Gene
101261722  alpha-aminoadipic semialdehyde synthase [KO:K14157] [EC:1.5.1.8 1.5.1.9]
101252968  aldehyde dehydrogenase family 7 member B4 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
101258624  alpha-kGDH; alpha - ketoglutarate dehydrogenase subunit E2 [KO:K00658] [EC:2.3.1.61]
101268590  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial [KO:K00658] [EC:2.3.1.61]
101245293  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
101246429  dihydrolipoyl dehydrogenase 1, chloroplastic isoform X1 [KO:K00382] [EC:1.8.1.4]
101245444  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
544237  dihydrolipoamide dehydrogenase precursor [KO:K00382] [EC:1.8.1.4]
101263745  probable enoyl-CoA hydratase 1, peroxisomal [KO:K01692] [EC:4.2.1.17]
101256172  probable acetyl-CoA acetyltransferase, cytosolic 2 [KO:K00626] [EC:2.3.1.9]
101260435  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
101262830  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
101265751  probable sarcosine oxidase [KO:K00306] [EC:1.5.3.1 1.5.3.7]
101244931  calmodulin-lysine N-methyltransferase [KO:K18826] [EC:2.1.1.60]
101259448  histone-lysine N-methyltransferase ASHR1 [KO:K11426] [EC:2.1.1.354 2.1.1.357]
101244888  histone-lysine N-methyltransferase ATXR3 [KO:K22748] [EC:2.1.1.354]
101260505  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X1 [KO:K11420] [EC:2.1.1.355]
101247436  uncharacterized protein LOC101247436 [KO:K11420] [EC:2.1.1.355]
101268173  histone-lysine N-methyltransferase family member SUVH9-like [KO:K11420] [EC:2.1.1.355]
100134891  EZ1; histone-lysine N-methyltransferase EZ1 [KO:K11430] [EC:2.1.1.356]
101244804  histone-lysine N-methyltransferase SUVR3 [KO:K11433] [EC:2.1.1.357]
101258606  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [KO:K24405] [EC:2.1.1.368]
101243931  histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [KO:K24405] [EC:2.1.1.368]
101265411  histone-lysine N-methyltransferase ATXR6 [KO:K24406] [EC:2.1.1.369]
101244542  probable Histone-lysine N-methyltransferase ATXR5 isoform X1 [KO:K24406] [EC:2.1.1.369]
104645747  aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
101247085  glutaredoxin-C3 [KO:K00128] [EC:1.2.1.3]
101250104  ALDH2B7a; aldehyde dehydrogenase family 2 member B7a [KO:K00128] [EC:1.2.1.3]
101262822  ALD3H1; aldehyde dehydrogenase family 3 member H2 [KO:K00128] [EC:1.2.1.3]
101267634  ADH3F1a; aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
101250474  aldehyde dehydrogenase family 2 member B7, mitochondrial [KO:K00128] [EC:1.2.1.3]
101254485  ADH2B7d; aldehyde dehydrogenase family 2 member B7d [KO:K00128] [EC:1.2.1.3]
101257095  aldehyde dehydrogenase family 2 member B7, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
112940646  aldehyde dehydrogenase family 3 member F1-like [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
sly00020  Citrate cycle (TCA cycle)
sly00300  Lysine biosynthesis
sly00780  Biotin metabolism
KO pathway
ko00310   
LinkDB

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