KEGG   PATHWAY: svs00230
Entry
svs00230                    Pathway                                
Name
Purine metabolism - Setaria viridis (green foxtail)
Class
Metabolism; Nucleotide metabolism
Pathway map
svs00230  Purine metabolism
svs00230

Module
svs_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:svs00230]
svs_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:svs00230]
svs_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:svs00230]
svs_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:svs00230]
svs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:svs00230]
Other DBs
GO: 0006163 0042278
Organism
Setaria viridis (green foxtail) [GN:svs]
Gene
117846620  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
117860064  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
117852673  nudix hydrolase 2-like isoform X1 [KO:K26956] [EC:3.6.1.13 3.6.1.22]
117846615  nudix hydrolase 23, chloroplastic [KO:K18453] [EC:3.6.1.13 3.6.1.18]
117852805  nudix hydrolase 14, chloroplastic [KO:K18447] [EC:3.6.1.21]
117838068  phosphoglucomutase, cytoplasmic 2 [KO:K01835] [EC:5.4.2.2]
117838479  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
117840500  ribose-phosphate pyrophosphokinase 1, chloroplastic [KO:K00948] [EC:2.7.6.1]
117853800  ribose-phosphate pyrophosphokinase 2, chloroplastic-like isoform X1 [KO:K00948] [EC:2.7.6.1]
117848228  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
117857680  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
117866714  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
117864181  phosphoribosylglycinamide formyltransferase, chloroplastic [KO:K00601] [EC:2.1.2.2]
117836438  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
117837057  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
117850845  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [KO:K01933] [EC:6.3.3.1]
117854809  uncharacterized protein LOC117854809 [KO:K01933] [EC:6.3.3.1]
117857790  phosphoribosylaminoimidazole carboxylase, chloroplastic [KO:K11808] [EC:4.1.1.21]
117845369  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic isoform X1 [KO:K01923] [EC:6.3.2.6]
117840096  adenylosuccinate lyase-like [KO:K01756] [EC:4.3.2.2]
117845991  bifunctional purine biosynthesis protein PurH-like [KO:K00602] [EC:2.1.2.3 3.5.4.10]
117862021  bifunctional purine biosynthesis protein PurH-like isoform X1 [KO:K00602] [EC:2.1.2.3 3.5.4.10]
117833065  adenine phosphoribosyltransferase 4-like [KO:K00759] [EC:2.4.2.7]
117864303  adenine phosphoribosyltransferase 2-like [KO:K00759] [EC:2.4.2.7]
117850882  adenine phosphoribosyltransferase 1 [KO:K00759] [EC:2.4.2.7]
117846251  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
117846278  5'-nucleotidase SurE-like [KO:K03787] [EC:3.1.3.5 3.1.3.6]
117854507  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
117848988  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
117839284  inosine-5'-monophosphate dehydrogenase-like [KO:K00088] [EC:1.1.1.205]
117843214  inosine-5'-monophosphate dehydrogenase-like [KO:K00088] [EC:1.1.1.205]
117846446  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
117846912  nucleoside diphosphate kinase 3-like [KO:K00940] [EC:2.7.4.6]
117840905  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
117841400  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
117850937  nucleoside diphosphate kinase 2, chloroplastic-like [KO:K00940] [EC:2.7.4.6]
117840082  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
117861250  probable apyrase 5 isoform X1 [KO:K01510] [EC:3.6.1.5]
117833785  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
117833786  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
117836692  probable apyrase 1 [KO:K14641] [EC:3.6.1.5]
117845404  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
117865831  probable apyrase 3 [KO:K14641] [EC:3.6.1.5]
117836032  inosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
117836203  xanthine dehydrogenase [KO:K00106] [EC:1.17.1.4 1.17.3.2]
117867000  xanthine dehydrogenase-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
117861190  GMP synthase [glutamine-hydrolyzing] isoform X1 [KO:K01951] [EC:6.3.5.2]
117837813  guanylate kinase 2, chloroplastic/mitochondrial [KO:K00942] [EC:2.7.4.8]
117850836  LOW QUALITY PROTEIN: guanylate kinase 1-like [KO:K00942] [EC:2.7.4.8]
117841447  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
117853118  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
117858470  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
117864108  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
117851309  ribonucleoside-diphosphate reductase small chain-like [KO:K10808] [EC:1.17.4.1]
117841737  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
117857733  5'-deoxynucleotidase HDDC2-like [KO:K07023] [EC:3.1.3.89]
117845471  probable GTP diphosphokinase RSH3, chloroplastic [KO:K00951] [EC:2.7.6.5]
117842057  probable GTP diphosphokinase RSH3, chloroplastic [KO:K00951] [EC:2.7.6.5]
117838875  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
117861147  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
117865807  probable GTP diphosphokinase CRSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
117837727  adenylosuccinate synthetase 1, chloroplastic [KO:K01939] [EC:6.3.4.4]
117838464  adenylosuccinate synthetase 2, chloroplastic [KO:K01939] [EC:6.3.4.4]
117844651  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
117849462  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
117862815  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
117862931  adenosine kinase 2-like [KO:K00856] [EC:2.7.1.20]
117848555  adenylate kinase 4-like [KO:K00939] [EC:2.7.4.3]
117834717  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
117836357  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
117859541  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
117861115  adenylate kinase, chloroplastic [KO:K00939] [EC:2.7.4.3]
117861634  probable adenylate kinase 5, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
117850302  probable adenylate kinase 6, chloroplastic [KO:K00939] [EC:2.7.4.3]
117846002  adenylate kinase isoenzyme 6 homolog [KO:K18532] [EC:2.7.4.3]
117838579  adenylate kinase isoenzyme 6 homolog isoform X1 [KO:K18532] [EC:2.7.4.3]
117856815  venom phosphodiesterase 2-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
117834736  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like [KO:K01522] [EC:3.6.1.29]
117840214  ATP-sulfurylase 3, chloroplastic [KO:K13811] [EC:2.7.7.4 2.7.1.25]
117862786  ATP sulfurylase 2-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
117835904  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
117845360  adenylyl-sulfate kinase 3 isoform X1 [KO:K00860] [EC:2.7.1.25]
117866352  adenylyl-sulfate kinase 3-like [KO:K00860] [EC:2.7.1.25]
117858963  uricase-2 [KO:K00365] [EC:1.7.3.3]
117840462  uric acid degradation bifunctional protein TTL isoform X1 [KO:K13484] [EC:3.5.2.17 4.1.1.97]
117852955  probable allantoate deiminase [KO:K02083] [EC:3.5.3.9]
117844900  probable (S)-ureidoglycine aminohydrolase isoform X1 [KO:K14977] [EC:3.5.3.26]
117850166  ureidoglycolate hydrolase [KO:K18151] [EC:3.5.1.116]
117852328  urease [KO:K01427] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
svs00030  Pentose phosphate pathway
svs00220  Arginine biosynthesis
svs00250  Alanine, aspartate and glutamate metabolism
svs00260  Glycine, serine and threonine metabolism
svs00340  Histidine metabolism
svs00630  Glyoxylate and dicarboxylate metabolism
svs00730  Thiamine metabolism
svs00740  Riboflavin metabolism
svs00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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