KEGG   PATHWAY: vvl00230
Entry
vvl00230                    Pathway                                
Name
Purine metabolism - Vibrio vulnificus 93U204
Class
Metabolism; Nucleotide metabolism
Pathway map
vvl00230  Purine metabolism
vvl00230

Module
vvl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vvl00230]
vvl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vvl00230]
vvl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vvl00230]
vvl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vvl00230]
vvl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vvl00230]
Other DBs
GO: 0006163 0042278
Organism
Vibrio vulnificus 93U204 [GN:vvl]
Gene
VV93_v1c35650  MutT/nudix family protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
VV93_v1c05240  MutT/nudix family protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
VV93_v1c02080  nudE; ADP-ribose diphosphatase NudE [KO:K08312] [EC:3.6.1.-]
VV93_v1c23980  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
VV93_v1c09430  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
VV93_v1c08580  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
VV93_v1c21230  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
VV93_v1c28610  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
VV93_v1c22410  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
VV93_v1c17230  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
VV93_v1c07870  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
VV93_v1c22400  phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
VV93_v1c29420  phosphoribosylaminoimidazole carboxylase ATPase subunit [KO:K01589] [EC:6.3.4.18]
VV93_v1c29410  phosphoribosylaminoimidazole carboxylase catalytic subunit [KO:K01588] [EC:5.4.99.18]
VV93_v1c13770  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
VV93_v1c12550  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
VV93_v1c28600  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
VV93_v1c21190  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
VV93_v1c37360  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
VV93_v1c08670  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic [KO:K11751] [EC:3.1.3.5 3.6.1.45]
VV93_v1c25220  surE; stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
VV93_v1c37190  inosine-guanosine kinase [KO:K00892] [EC:2.7.1.73]
VV93_v1c12590  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
VV93_v1c31890  xapA; xanthosine phosphorylase [KO:K03783] [EC:2.4.2.1]
VV93_v1c33400  deoD; purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
VV93_v1c23970  deoD; purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
VV93_v1c30550  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
VV93_v1c06500  polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
VV93_v1c24810  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
VV93_v1c07210  inosine 5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
VV93_v1c07090  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
VV93_v1c06450  NTPase [KO:K01529] [EC:3.6.1.73]
VV93_v1c25850  deoxyribonucleotide triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
VV93_v1c07940  xanthine-guanine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
VV93_v1c07220  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
VV93_v1c41090  guanosine 5'-monophosphate oxidoreductase [KO:K00364] [EC:1.7.1.7]
VV93_v1c02220  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
VV93_v1c11640  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
VV93_v1c11630  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
VV93_v1c38380  anaerobic ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
VV93_v1c10330  deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
VV93_v1c10340  5'-nucleotidase [KO:K08722] [EC:3.1.3.89]
VV93_v1c02200  bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
VV93_v1c29050  guanosine pentaphosphate phosphohydrolase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
VV93_v1c06730  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
VV93_v1c25300  GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
VV93_v1c00740  cyaA; adenylate cyclase [KO:K05851] [EC:4.6.1.1]
VV93_v1c27940  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
VV93_v1c41600  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
VV93_v1c39630  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
VV93_v1c08210  Rossmann fold nucleotide-binding protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
VV93_v1c03790  cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
VV93_v1c14020  2', 3'-cyclic nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
VV93_v1c09260  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
VV93_v1c25290  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
VV93_v1c05260  cyclic 3',5'-adenosine monophosphate phosphodiesterase [KO:K03651] [EC:3.1.4.53]
VV93_v1c04430  apaH; diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
VV93_v1c03840  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
VV93_v1c03820  cysN; sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
VV93_v1c03810  cysD; sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
vvl00030  Pentose phosphate pathway
vvl00220  Arginine biosynthesis
vvl00250  Alanine, aspartate and glutamate metabolism
vvl00260  Glycine, serine and threonine metabolism
vvl00340  Histidine metabolism
vvl00630  Glyoxylate and dicarboxylate metabolism
vvl00730  Thiamine metabolism
vvl00740  Riboflavin metabolism
vvl00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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