KEGG   PATHWAY: xph00230
Entry
xph00230                    Pathway                                
Name
Purine metabolism - Xanthomonas phaseoli
Class
Metabolism; Nucleotide metabolism
Pathway map
xph00230  Purine metabolism
xph00230

Module
xph_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xph00230]
xph_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xph00230]
xph_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xph00230]
xph_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xph00230]
xph_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xph00230]
xph_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:xph00230]
Other DBs
GO: 0006163 0042278
Organism
Xanthomonas phaseoli [GN:xph]
Gene
XppCFBP6546_06940  XppCFBP6546P_06940; NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
XppCFBP6546_20430  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
XppCFBP6546_14840  XppCFBP6546P_14840; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
XppCFBP6546_16440  XppCFBP6546P_16440; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
XppCFBP6546_06765  XppCFBP6546P_06765; ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
XppCFBP6546_06310  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
XppCFBP6546_09200  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
XppCFBP6546_21100  XppCFBP6546P_21100; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
XppCFBP6546_05300  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
XppCFBP6546_07930  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
XppCFBP6546_21115  XppCFBP6546P_21115; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
XppCFBP6546_22515  XppCFBP6546P_22515; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
XppCFBP6546_22510  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
XppCFBP6546_09405  XppCFBP6546P_09405; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
XppCFBP6546_03735  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
XppCFBP6546_09190  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
XppCFBP6546_01060  XppCFBP6546P_01060; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
XppCFBP6546_18260  XppCFBP6546P_18260; 5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
XppCFBP6546_18910  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
XppCFBP6546_17960  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
XppCFBP6546_04760  XppCFBP6546P_04760; hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
XppCFBP6546_01585  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
XppCFBP6546_02800  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
XppCFBP6546_17220  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
XppCFBP6546_05625  XppCFBP6546P_05625; xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
XppCFBP6546_21410  XppCFBP6546P_21410; xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
XppCFBP6546_05620  XppCFBP6546P_05620; xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
XppCFBP6546_21405  XppCFBP6546P_21405; xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
XppCFBP6546_05615  XppCFBP6546P_05615; 2Fe-2S iron-sulfur cluster binding domain-containing protein [KO:K13483]
XppCFBP6546_21400  paoA; aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
XppCFBP6546_13285  XppCFBP6546P_13285; glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
XppCFBP6546_01590  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
XppCFBP6546_17240  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
XppCFBP6546_14105  XppCFBP6546P_14105; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
XppCFBP6546_14110  XppCFBP6546P_14110; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
XppCFBP6546_17250  XppCFBP6546P_17250; bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
XppCFBP6546_06270  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
XppCFBP6546_03165  XppCFBP6546P_03165; bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K00951] [EC:2.7.6.5]
XppCFBP6546_04785  XppCFBP6546P_04785; CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
XppCFBP6546_05785  XppCFBP6546P_05785; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
XppCFBP6546_08335  XppCFBP6546P_08335; carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
XppCFBP6546_10335  XppCFBP6546P_10335; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
XppCFBP6546_22550  XppCFBP6546P_22550; LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
XppCFBP6546_17010  XppCFBP6546P_17010; adenylate kinase [KO:K00939] [EC:2.7.4.3]
XppCFBP6546_20440  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
XppCFBP6546_07210  XppCFBP6546P_07210; symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
XppCFBP6546_17620  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
XppCFBP6546_17615  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
XppCFBP6546_10400  hpyO; FAD-dependent urate hydroxylase HpyO [KO:K22879] [EC:1.14.13.113]
XppCFBP6546_10405  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
XppCFBP6546_10395  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
XppCFBP6546_10385  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
XppCFBP6546_10375  XppCFBP6546P_10375; allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
XppCFBP6546_10380  XppCFBP6546P_10380; alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
XppCFBP6546_10355  XppCFBP6546P_10355; gamma-glutamyltransferase family protein [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
xph00030  Pentose phosphate pathway
xph00220  Arginine biosynthesis
xph00250  Alanine, aspartate and glutamate metabolism
xph00260  Glycine, serine and threonine metabolism
xph00340  Histidine metabolism
xph00630  Glyoxylate and dicarboxylate metabolism
xph00730  Thiamine metabolism
xph00740  Riboflavin metabolism
xph00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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