SSDB Best Search Result

Entry:bpu:BPUM_0872 (302 a.a.)
Name:pseudouridine synthase
KO:K06180 23S rRNA pseudouridine1911/1915/1917 synthase
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Search Result : 195 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
bsu:BSU09210 RNA pseudouridine synthase YhcT            K06180     302     1190     0.588      296     
btk:BT9727_1184 ribosomal large subunit pseudouridylate K06180     307      982     0.486      296     
ban:BA_1304 ribosomal large subunit pseudouridine synth K06180     307      973     0.483      296     
bce:BC1293 Ribosomal large subunit pseudouridine syntha K06180     307      931     0.473      296     
cac:CA_C1266 Pseudouridylate synthase family protein, y K06180     299      690     0.384      289     
lmo:lmo2244 ribosomal large subunit pseudouridine synth K06180     289      685     0.399      286     
lin:lin2346 similar to putative ribosomal large subunit K06180     289      678     0.399      286     
cbo:CBO2980 putative ribosomal large subunit pseudourid K06180     300      661     0.365      288     
lcb:LCABL_16810 Pseudouridine synthase                  K06180     307      630     0.371      272     
cpe:CPE2122 conserved hypothetical protein              K06180     298      620     0.344      294     
lpl:lp_1781 RNA pseudouridylate synthase                K06180     307      599     0.393      267     
sao:SAOUHSC_01982 ribosomal large subunit pseudouridine K06180     273      593     0.365      274     
sau:SA1668 conserved hypothetical protein               K06180     273      593     0.365      274     
ser:SERP0763 ribosomal large subunit pseudouridine synt K06180     305      592     0.380      274     
cdf:CD630_10600 putative pseudouridylate synthase       K06180     300      589     0.364      264     
spr:spr1006 23S rRNA pseudouridine synthase             K06180     298      585     0.354      291     
spn:SP_1099 ribosomal large subunit pseudouridine synth K06180     298      585     0.354      291     
lla:L25787 pseudouridine synthase                       K06180     301      579     0.347      297     
llm:llmg_1524 ribosomal large subunit pseudouridine syn K06180     301      569     0.350      300     
tma:TM0462 conserved hypothetical protein               K06180     311      569     0.334      302     
nme:NMB0704 ribosomal large subunit pseudouridine synth K06180     374      564     0.369      274     
ngo:NGO_0278 pseudouridine synthase                     K06180     374      562     0.365      274     
bxe:Bxe_A2346 ribosomal large subunit pseudouridine syn K06180     438      559     0.374      281     
npu:Npun_R3812 pseudouridine synthase, RluA family      K06180     345      554     0.364      280     
gvi:glr0073 ORF_ID:glr0073; probable pseudouridine synt K06180     310      553     0.353      300     
acb:A1S_0841 ribosomal large subunit pseudouridine synt K06180     350      551     0.328      308     
mmp:MMP1010 Pseudouridine synthase:Pseudouridine syntha K06180     297      548     0.324      293     
pae:PA4544 pseudouridine synthase                       K06180     320      547     0.355      279     
rso:RSc1628 probable ribosomal large subunit pseudourid K06180     358      545     0.357      311     
aci:ACIAD2897 ribosomal large subunit pseudouridine syn K06180     350      543     0.322      307     
ljo:LJ_1186 ribosomal large subunit pseudouridine synth K06180     304      541     0.361      274     
pmu:PM1719 SfB                                          K06180     324      539     0.348      282     
reh:H16_A1434 pseudouridylate synthase, 23S RNA-specifi K06180     396      537     0.351      313     
bma:BMA1324 ribosomal large subunit pseudouridine synth K06180     395      537     0.353      283     
bps:BPSL1532 putative ribosomal large subunit pseudouri K06180     395      537     0.353      283     
hin:HI_0176 sfhB protein (sfhB)                         K06180     324      536     0.339      313     
fps:FP0651 Probable 23S rRNA pseudouridine synthase     K06180     347      535     0.336      321     
smu:SMU_854 putative pseudouridylate synthase           K06180     296      535     0.361      263     
ftu:FTT_1245 ribosomal large subunit pseudouridine synt K06180     332      533     0.343      283     
bja:blr7336 ORF_ID:blr7336; pseudouridine synthase homo K06180     335      533     0.369      279     
cte:CT1299 ribosomal large subunit pseudouridine syntha K06180     329      531     0.320      322     
gsu:GSU0082 23S rRNA synthase                           K06180     322      528     0.333      315     
hdu:HD_0469 pseudouridine synthase                      K06180     325      528     0.345      281     
apl:APL_1122 ribosomal large subunit pseudouridine synt K06180     325      524     0.338      281     
spy:SPy_0827 conserved hypothetical protein             K06180     296      523     0.383      248     
smar:SM39_0184 23S rRNA pseudouridine synthase          K06180     325      521     0.338      284     
sme:SMc00647 Putative ribosomal large subunit pseudouri K06180     343      520     0.360      314     
bmf:BAB1_1666 Prenyl group binding site (CAAX box):RNA- K06180     334      518     0.331      323     
bfr:BF0489 ribosomal large subunit pseudouridine syntha K06180     357      518     0.335      316     
bms:BR1651 ribosomal large subunit pseudouridine syntha K06180     347      518     0.331      323     
ddd:Dda3937_01572 23S rRNA pseudouridine synthase       K06180     325      517     0.333      285     
eco:b2594 23S rRNA pseudouridine(1911/1915/1917) syntha K06180     326      517     0.337      282     
ecj:JW2576 23S rRNA pseudouridine synthase              K06180     326      517     0.337      282     
rle:RL3765 putative ribosomal large subunit pseudouridi K06180     341      516     0.361      302     
ret:RHE_CH03341 pseudouridylate synthase, ribosomal lar K06180     354      516     0.384      279     
vvu:VV1_0484 Ribosomal large subunit pseudouridine synt K06180     325      516     0.361      285     
sfl:SF2653 23S rRNA pseudouridine synthase D            K06180     326      516     0.333      282     
eba:ebA4725 ribosomal large subunit pseudouridine synth K06180     306      515     0.341      279     
syn:slr1629 hypothetical protein                        K06180     327      515     0.366      246     
ecs:ECs_3457 ribosomal large subunit pseudouridine synt K06180     326      515     0.333      282     
dra:DR_1789 ribosomal large subunit pseudouridine synth K06180     338      515     0.363      284     
lpn:lpg1333 ribosomal large subunit pseudouridine synth K06180     321      514     0.309      311     
xcc:XCC3088 ribosomal large subunit pseudouridine synth K06180     331      513     0.329      283     
ece:Z3888 suppressor of ftsH mutation                   K06180     326      513     0.333      282     
eam:EAMY_0833 ribosomal large subunit pseudouridine syn K06180     325      512     0.337      288     
mlo:mlr3740 pseudouridine synthase                      K06180     329      512     0.351      299     
ana:alr0522 probable pseudouridine synthase             K06180     312      511     0.343      277     
ppu:PP_0623 23S rRNA pseudouridine(1911,1915,1917) synt K06180     320      509     0.343      277     
bme:BMEI0377 ribosomal large subunit pseudouridine synt K06180     347      509     0.328      323     
kpn:KPN_02917 23S rRNA pseudouridine synthase           K06180     326      506     0.338      284     
yen:YE0891 ribosomal large subunit pseudouridine syntha K06180     325      506     0.327      284     
rpa:TX73_001905 RluA family pseudouridine synthase      K06180     324      506     0.354      277     
bth:BT_3712 ribosomal large subunit pseudouridine synth K06180     357      504     0.329      316     
vpa:VP0559 ribosomal large subunit pseudouridine syntha K06180     325      504     0.345      278     
atu:Atu2443 ribosomal large subunit pseudouridine synth K06180     340      504     0.352      293     
cau:Caur_0901 pseudouridine synthase, RluA family       K06180     316      503     0.343      286     
xom:XOO1481 ribosomal large subunit pseudouridine synth K06180     331      502     0.325      283     
syf:Synpcc7942_1112 ribosomal large subunit pseudouridi K06180     313      501     0.367      248     
syc:syc0437_d ribosomal large subunit pseudouridine syn K06180     313      501     0.367      248     
vfi:VF_0564 23S rRNA pseudouridine synthase             K06180     324      500     0.357      286     
xfa:XF_0939 ribosomal large subunit pseudouridine synth K06180     331      500     0.338      275     
yps:YPTB0846 pseudouridine synthase (pseudouridines 191 K06180     325      497     0.324      284     
vch:VC_0709 ribosomal large subunit pseudouridine synth K06180     324      497     0.338      284     
cro:ROD_25361 ribosomal large subunit pseudouridine syn K06180     326      496     0.323      285     
mca:MCA0972 ribosomal large subunit pseudouridine synth K06180     334      496     0.330      282     
aae:aq_1758 hypothetical protein                        K06180     316      495     0.303      310     
ypk:y0912 suppressor of ftsH mutation                   K06180     325      494     0.324      284     
ype:YPO3277 ribosomal large subunit pseudouridine synth K06180     325      494     0.324      284     
tth:TT_C0040 ribosomal large subunit pseudouridine synt K06180     300      493     0.349      281     
avn:Avin_11940 Pseudouridine synthase                   K06180     336      492     0.333      276     
xac:XAC3217 ribosomal large subunit pseudouridine synth K06180     331      492     0.324      281     
tel:tll1538 ribosomal large subunit pseudouridine synth K06180     308      491     0.337      273     
seo:STM14_3263 23S rRNA pseudouridine synthase D        K06180     326      490     0.327      284     
sty:STY2851 ftsH suppressor protein SfhB                K06180     326      490     0.327      284     
stm:STM2662 pseudouridine synthase                      K06180     326      490     0.327      284     
ccr:CC_0453 ribosomal large subunit pseudouridine synth K06180     342      489     0.404      245     
fnu:FN1372 Ribosomal large subunit pseudouridine syntha K06180     319      486     0.300      300     
rsp:RSP_2409 ribosomal large subunit pseudouridine synt K06180     349      485     0.356      292     
eca:ECA3347 ribosomal large subunit pseudouridine synth K06180     325      480     0.334      290     
lil:LA_0223 ribosomal large subunit pseudouridine synth K06180     312      480     0.320      297     
enc:ECL_03926 23S rRNA pseudouridine synthase D         K06180     282      479     0.337      258     
dvu:DVU_1024 ribosomal large subunit pseudouridine synt K06180     541      479     0.357      230     
pti:PHATRDRAFT_15960 hypothetical protein                          325      478     0.338      263     
cpn:CPn_0719 predicted Pseudouridine Synthase           K06180     325      478     0.348      276     
wol:WD_1162 ribosomal large subunit pseudouridine synth K06180     276      474     0.317      278     
psb:Psyr_0726 ribosomal large subunit pseudouridine syn K06180     320      472     0.311      283     
bpe:BP1147 ribosomal large subunit pseudouridine syntha K06180     320      472     0.361      277     
mta:Moth_0869 ribosomal large subunit pseudouridine syn K06180     306      471     0.350      257     
pma:Pro_0219 23S RNA-specific pseudouridylate synthase  K06180     318      470     0.319      279     
pst:PSPTO_0827 ribosomal large subunit pseudouridine sy K06180     320      469     0.353      232     
mge:MG_209 pseudouridine synthase, RluA family          K06180     308      469     0.323      282     
amd:AMED_2971 ribosomal large subunit pseudouridine syn K06180     309      465     0.331      278     
son:SO_3579 23S rRNA pseudouridine1911/1915/1917 syntha K06180     323      465     0.336      280     
blo:BL0123 widely conserved hypothetical protein in the K06180     320      464     0.336      259     
rru:Rru_A1111 ribosomal large subunit pseudouridine syn K06180     343      463     0.319      310     
buc:BU401 ribosomal large subunit pseudouridine synthas K06180     312      460     0.300      313     
hth:HTH_0706 pseudouridine synthase                     K06180     318      456     0.315      302     
sma:SAVERM_6133 putative pseudouridylate synthase       K06180     314      451     0.336      232     
msm:MSMEG_3175 ribosomal large subunit pseudouridine sy K06180     309      449     0.308      302     
ctr:CT_658 RNA pseudouridine synthase                   K06180     334      442     0.308      308     
cje:Cj1280c pseudouridine synthase                      K06180     322      441     0.305      302     
cdi:DIP1583 Putative pseudouridine synthase             K06180     308      440     0.328      253     
sct:SCAT_1189 putative enzyme                           K06180     313      438     0.306      268     
rpr:RP846 SFHB PROTEIN HOMOLOG (sfhB)                   K06180     313      438     0.280      311     
ctb:CTL0027 ribosomal large subunit pseudouridine synth K06180     335      431     0.305      308     
sgu:SGLAU_09410 putative RNA pseudouridine synthase     K06180     314      430     0.323      232     
ksk:KSE_21100 putative ribosomal large subunit pseudour K06180     312      429     0.283      311     
sco:SCO2073 putative ribosomal large subunit pseudourid K06180     314      428     0.302      268     
rco:RC1310 sfhB protein homolog                         K06180     313      428     0.305      259     
mtu:Rv1540 RNA pseudouridine synthase                   K06180     308      426     0.310      290     
mtc:MT1592 pseudouridine synthase, RluD-related protein K06180     308      426     0.310      290     
cgl:Cgl2138 Pseudouridylate synthases, 23S RNA-specific K06180     310      425     0.348      224     
mpn:MPN_292 ribosomal large subunit pseudouridine synth K06180     309      424     0.312      279     
sgr:SGR_5432 putative ribosomal large subunit pseudouri K06180     313      423     0.299      268     
rha:RHA1_ro01072 pseudouridylate synthase               K06180     302      423     0.295      278     
rcu:8262627 RNA pseudouridine synthase 2, chloroplastic K06180     417      416     0.280      353     
csv:101213921 RNA pseudouridine synthase 2, chloroplast K06180     446      413     0.290      314     
sly:101246422 RNA pseudouridine synthase 2, chloroplast K06180     436      410     0.297      323     
mab:MAB_2699c Probable pseudouridine synthase RluD      K06180     305      403     0.309      265     
mle:ML1200 putative pseudouridine synthase              K06180     308      401     0.277      300     
pde:Pden_2215 ribosomal large subunit pseudouridine syn K06180     341      398     0.320      272     
gmx:100810383 RNA pseudouridine synthase 2, chloroplast K06180     450      393     0.276      312     
hpy:HP_0745 conserved hypothetical protein              K06180     327      391     0.280      296     
hpj:jhp_0682 putative                                   K06180     327      391     0.276      297     
mtr:11427408 RNA pseudouridine synthase 2, chloroplasti K06180     456      390     0.273      311     
osa:4342081 rNA pseudouridine synthase 2, chloroplastic K06180     445      387     0.286      325     
vvi:100852977 RNA pseudouridine synthase 2, chloroplast K06180     433      386     0.276      315     
tpa:TP_0339 conserved hypothetical protein              K06180     331      386     0.317      268     
cit:102619972 RNA pseudouridine synthase 2, chloroplast K06180     421      383     0.266      354     
ath:AT1G76050 Pseudouridine synthase family protein     K06180     430      383     0.291      313     
tde:TDE_1082 ribosomal large subunit pseudouridine synt K06180     345      360     0.263      331     
hsa:27079 RNA pseudouridine synthase domain containing             545      345     0.295      241     
zma:100272459 RNA binding protein                       K06180     419      338     0.299      261     
cre:CHLRE_02g078750v5 uncharacterized protein           K06180     465      336     0.256      348     
mdo:100031994 RNA pseudouridylate synthase domain conta            541      335     0.271      299     
xtr:100497757 RNA pseudouridylate synthase domain-conta            497      334     0.282      227     
ocu:100346387 pseudouridylate synthase RPUSD2                      561      333     0.282      241     
tps:THAPSDRAFT_269764 predicted protein                            337      331     0.315      200     
ssc:102159271 LOW QUALITY PROTEIN: RNA pseudouridylate             550      328     0.290      241     
ecb:100071360 RNA pseudouridylate synthase domain-conta            559      325     0.282      241     
ola:101173104 RNA pseudouridylate synthase domain-conta            541      322     0.299      214     
rno:311326 pseudouridylate synthase RPUSD2                         553      321     0.276      239     
xla:121397169 RNA pseudouridylate synthase domain-conta            549      320     0.286      227     
mmu:271842 RNA pseudouridylate synthase domain containi            553      319     0.276      239     
fca:101086655 RNA pseudouridylate synthase domain-conta            552      316     0.282      241     
bta:506936 pseudouridylate synthase RPUSD2                         552      316     0.276      239     
cfa:487496 RNA pseudouridylate synthase domain-containi            552      315     0.278      241     
kla:KLLA0_F24794g uncharacterized protein               K14655     597      311     0.335      224     
mdm:103444808 RNA pseudouridine synthase 5 isoform X1              386      307     0.264      333     
dre:565088 pseudouridylate synthase RPUSD2                         579      306     0.283      240     
sce:YOL066C bifunctional DRAP deaminase/tRNA pseudourid K14655     591      304     0.296      216     
ame:410341 RNA pseudouridylate synthase domain-containi            551      302     0.283      219     
cal:CAALFM_C501940WA bifunctional DRAP deaminase/tRNA p K14655     589      296     0.280      218     
mcc:708166 RNA pseudouridylate synthase domain-containi            484      292     0.317      186     
tca:661795 uncharacterized protein C18B11.02c                      642      289     0.280      200     
dme:Dmel_CG6187 RluA pseudouridine synthase 2, isoform             547      286     0.271      218     
bmor:101737404 pseudouridylate synthase RPUSD2 isoform             612      285     0.267      195     
tbr:Tb927.3.2130 hypothetical protein, conserved                   828      281     0.288      222     
cel:CELE_K07E8.7 Pseudouridine synthase                            432      279     0.305      174     
aag:5569446 RNA pseudouridylate synthase domain-contain            723      278     0.277      195     
aga:1279080 pseudouridylate synthase RPUSD2 isoform X1             818      278     0.277      195     
cne:CND02470 conserved hypothetical protein                        518      276     0.291      220     
aor:AO090102000227 pseudouridine synthase               K15454     522      275     0.276      246     
afm:AFUA_2G16360 DRAP deaminase (Rib2)                  K15454     526      273     0.281      249     
lma:LMJF_35_5110 hypothetical protein                              741      273     0.289      228     
spo:2542607 tRNA pseudouridylate synthase               K15454     394      272     0.284      222     
ani:ANIA_10936 hypothetical protein                     K15454     572      260     0.246      281     
fgr:FGSG_02630 hypothetical protein                     K15454     512      252     0.286      227     
ddi:DDB_G0281097 pseudouridine synthase family protein             578      250     0.241      282     
ncr:NCU03846 DRAP deaminase                             K15454     473      246     0.273      238     
mgr:MGG_08117 DRAP deaminase                            K15454     487      236     0.247      271     
vg:80515165 Bodo saltans virus; pseudouridine synthase             452      225     0.270      196     
gga:771031 RNA pseudouridylate synthase domain-containi            324      224     0.245      237     
pfa:PF3D7_0521500 ribosomal large subunit pseudouridyla            487      175     0.239      184     
nmr:Nmar_0336 Radical SAM domain protein                           526      119     0.220      250     

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