PATHWAY: char04010 Help
Entry
Name
MAPK signaling pathway - Clupea harengus (Atlantic herring)
Description
The mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals express at least four distinctly regulated groups of MAPKs, extracellular signal-related kinases (ERK)-1/2, Jun amino-terminal kinases (JNK1/2/3), p38 proteins (p38alpha/beta/gamma/delta) and ERK5, that are activated by specific MAPKKs: MEK1/2 for ERK1/2, MKK3/6 for the p38, MKK4/7 (JNKK1/2) for the JNKs, and MEK5 for ERK5. Each MAPKK, however, can be activated by more than one MAPKKK, increasing the complexity and diversity of MAPK signalling. Presumably each MAPKKK confers responsiveness to distinct stimuli. For example, activation of ERK1/2 by growth factors depends on the MAPKKK c-Raf, but other MAPKKKs may activate ERK1/2 in response to pro-inflammatory stimuli.
Class
Environmental Information Processing; Signal transduction
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Clupea harengus (Atlantic herring) [GN:
char ]
Gene
105900243 cacna1ab; calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1 [KO:K04344 ]
105892182 cacna1aa; voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1 [KO:K04344 ]
105889899 cacna1ba; LOW QUALITY PROTEIN: calcium channel, voltage-dependent, N type, alpha 1B subunit, a [KO:K04849 ]
105912627 cacna1bb; probable voltage-dependent N-type calcium channel subunit alpha-1B [KO:K04849 ]
105911367 cacna1c; voltage-dependent L-type calcium channel subunit alpha-1C isoform X1 [KO:K04850 ]
105898925 voltage-dependent L-type calcium channel subunit alpha-1D isoform X1 [KO:K04851 ]
105903391 cacna1da; calcium channel, voltage-dependent, L type, alpha 1D subunit, a [KO:K04851 ]
105898242 voltage-dependent R-type calcium channel subunit alpha-1E isoform X1 [KO:K04852 ]
105891294 voltage-dependent R-type calcium channel subunit alpha-1E-like [KO:K04852 ]
105898895 cacna1fb; calcium channel, voltage-dependent, L type, alpha 1F subunit [KO:K04853 ]
105893627 cacna1fa; voltage-dependent L-type calcium channel subunit alpha-1D [KO:K04853 ]
105903286 cacna1g; voltage-dependent T-type calcium channel subunit alpha-1G isoform X1 [KO:K04854 ]
105899901 cacna1ha; voltage-dependent T-type calcium channel subunit alpha-1H [KO:K04855 ]
105892183 voltage-dependent T-type calcium channel subunit alpha-1I [KO:K04856 ]
105908852 voltage-dependent T-type calcium channel subunit alpha-1I-like [KO:K04856 ]
105897327 cacna1sb; calcium channel, voltage-dependent, L type, alpha 1S subunit, b [KO:K04857 ]
105900081 cacna1sa; LOW QUALITY PROTEIN: calcium channel, voltage-dependent, L type, alpha 1S subunit, a [KO:K04857 ]
105889635 cacna2d1a; voltage-dependent calcium channel subunit alpha-2/delta-1a [KO:K04858 ]
105910328 voltage-dependent calcium channel subunit alpha-2/delta-1 [KO:K04858 ]
105895841 cacna2d2a; voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1 [KO:K04859 ]
105903398 voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1 [KO:K04859 ]
105898928 cacna2d3a; voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1 [KO:K04860 ]
105903388 voltage-dependent calcium channel subunit alpha-2/delta-3-like [KO:K04860 ]
122132928 voltage-dependent calcium channel subunit alpha-2/delta-3-like [KO:K04860 ]
105891511 cacna2d4b; voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1 [KO:K04861 ]
105911364 cacna2d4a; voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1 [KO:K04861 ]
105890760 cacnb1; voltage-dependent L-type calcium channel subunit beta-1 isoform X1 [KO:K04862 ]
122129424 cacnb2a; voltage-dependent L-type calcium channel subunit beta-2a isoform X1 [KO:K04863 ]
105897273 cacnb3b; voltage-dependent L-type calcium channel subunit beta-3 [KO:K04864 ]
105912747 cacnb3a; voltage-dependent L-type calcium channel subunit beta-3a isoform X1 [KO:K04864 ]
122131761 cacnb4a; voltage-dependent L-type calcium channel subunit beta-4a [KO:K04865 ]
105889629 cacnb4b; voltage-dependent L-type calcium channel subunit beta-4b isoform X1 [KO:K04865 ]
105898521 cacng1b; voltage-dependent calcium channel gamma-1 subunit [KO:K04866 ]
105900228 cacng1a; calcium channel, voltage-dependent, gamma subunit 1a [KO:K04866 ]
105891649 cacng2a; calcium channel, voltage-dependent, gamma subunit 2a [KO:K04867 ]
105899937 cacng3b; voltage-dependent calcium channel gamma-3 subunit [KO:K04868 ]
105898700 cacng4b; calcium channel, voltage-dependent, gamma subunit 4b [KO:K04869 ]
105900215 cacng5a; calcium channel, voltage-dependent, gamma subunit 5a isoform X1 [KO:K04870 ]
105902062 cacng6a; calcium channel, voltage-dependent, gamma subunit 6a [KO:K04871 ]
105894975 cacng6b; voltage-dependent calcium channel gamma-6 subunit isoform X1 [KO:K04871 ]
105902015 cacng7a; calcium channel, voltage-dependent, gamma subunit 7a [KO:K04872 ]
105894702 cacng7b; voltage-dependent calcium channel gamma-7 subunit isoform X2 [KO:K04872 ]
105901978 cacng8a; calcium channel, voltage-dependent, gamma subunit 8a [KO:K04873 ]
105894622 cacng8b; voltage-dependent calcium channel gamma-4 subunit [KO:K04873 ]
105910964 prkacaa; protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a isoform X1 [KO:K04345 ] [EC:2.7.11.11 ]
105890330 guanine nucleotide-binding protein subunit alpha-12 isoform X1 [KO:K04346 ]
105890719 gna12a; guanine nucleotide-binding protein subunit alpha-12a [KO:K04346 ]
105895117 gng12b; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 [KO:K04347 ]
105897431 ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
105893045 ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
105895419 serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X4 [KO:K04348 ] [EC:3.1.3.16 ]
105905553 rasgrf1; ras-specific guanine nucleotide-releasing factor 1 [KO:K04349 ]
105901165 rasgrf2b; ras-specific guanine nucleotide-releasing factor 2 isoform X1 [KO:K12326 ]
105911801 rasgrf2a; ras-specific guanine nucleotide-releasing factor 2 [KO:K12326 ]
105908693 rap guanine nucleotide exchange factor 2-like isoform X1 [KO:K08018 ]
105903569 rapgef2a; rap guanine nucleotide exchange factor 2 isoform X2 [KO:K08018 ]
122128541 rapgef2b; LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2 [KO:K08018 ]
105906165 egf; LOW QUALITY PROTEIN: pro-epidermal growth factor [KO:K04357 ]
105889175 LOW QUALITY PROTEIN: protransforming growth factor alpha [KO:K08774 ]
105903833 si:ch211-79m20.1; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1.1 [KO:K17386 ]
105897631 vegfaa; vascular endothelial growth factor A-A isoform X3 [KO:K05448 ]
105899546 vegfab; vascular endothelial growth factor Ab isoform X1 [KO:K05448 ]
116223738 snake venom vascular endothelial growth factor toxin ICPP-like [KO:K16859 ]
105908459 vegfc; vascular endothelial growth factor C isoform X2 [KO:K05449 ]
105899258 nradd; death domain-containing membrane protein NRADD [KO:K02583 ]
105898538 ngfra; tumor necrosis factor receptor superfamily member 16 [KO:K02583 ]
105901960 growth factor receptor-bound protein 2-like isoform X1 [KO:K04364 ]
105892387 map2k1; LOW QUALITY PROTEIN: dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368 ] [EC:2.7.12.2 ]
105905067 lamtor3; ragulator complex protein LAMTOR3 isoform X1 [KO:K04370 ]
105893548 atf4a; cyclic AMP-dependent transcription factor ATF-4 [KO:K04374 ]
105889814 fosab; v-fos FBJ murine osteosarcoma viral oncogene homolog Ab [KO:K04379 ]
105896149 tnfrsf1a; tumor necrosis factor receptor superfamily member 1A [KO:K03158 ]
122131951 faslg; tumor necrosis factor ligand superfamily member 6 [KO:K04389 ]
105895933 cdc42; LOW QUALITY PROTEIN: cell division control protein 42 homolog [KO:K04393 ]
105891104 tradd; tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171 ]
105890158 myd88; myeloid differentiation primary response protein MyD88 [KO:K04729 ]
105896452 growth arrest and DNA damage-inducible protein GADD45 beta [KO:K04402 ]
105913263 gadd45gb.1; growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1 isoform X2 [KO:K04402 ]
105904319 gadd45ga; growth arrest and DNA-damage-inducible, gamma a [KO:K04402 ]
105906135 gadd45bb; growth arrest and DNA-damage-inducible, beta b [KO:K04402 ]
105895248 gadd45ab; growth arrest and DNA-damage-inducible, alpha, b [KO:K04402 ]
105893549 tab1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2 [KO:K04403 ]
105897093 tab2; LOW QUALITY PROTEIN: TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 [KO:K04404 ]
105904885 ecsit; evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial [KO:K04405 ]
105902976 mapk8ip1b; C-Jun-amino-terminal kinase-interacting protein 1 isoform X2 [KO:K04434 ]
105895585 mapk8ip1a; C-Jun-amino-terminal kinase-interacting protein 1a [KO:K04434 ]
105912027 mapk8ip2; LOW QUALITY PROTEIN: C-Jun-amino-terminal kinase-interacting protein 2 [KO:K04435 ]
105890690 mapk8ip3; C-Jun-amino-terminal kinase-interacting protein 3 isoform X1 [KO:K04436 ]
105891992 nfatc1; LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1 [KO:K04446 ]
105905363 nuclear factor of activated T-cells, cytoplasmic 1 isoform X1 [KO:K04446 ]
105908735 nfatc3b; LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 3 [KO:K17333 ]
105899768 nfatc3a; nuclear factor of activated T-cells, cytoplasmic 3 [KO:K17333 ]
105902506 june; junE proto-oncogene, AP-1 transcription factor subunit [KO:K04448 ]
105908058 atf2; cyclic AMP-dependent transcription factor ATF-2 isoform X3 [KO:K04450 ]
105912172 ddit3; DNA damage-inducible transcript 3 protein isoform X1 [KO:K04452 ]
105903789 hspa8b; heat shock protein family A (Hsp70) member 8b [KO:K03283 ]
105897347 hspa1b; LOW QUALITY PROTEIN: heat shock 70 kDa protein-like [KO:K03283 ]
105897944 nr4a1; nuclear receptor subfamily 4 group A member 1 isoform X1 [KO:K04465 ]
105912617 nfkb1; nuclear factor NF-kappa-B p105 subunit isoform X2 [KO:K02580 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
Reference
Authors
Chen Z, Gibson TB, Robinson F, Silvestro L, Pearson G, Xu B, Wright A, Vanderbilt C, Cobb MH.
Title
MAP kinases.
Journal
Reference
Authors
Tanoue T, Nishida E.
Title
Docking interactions in the mitogen-activated protein kinase cascades.
Journal
Reference
Authors
Dent P, Yacoub A, Fisher PB, Hagan MP, Grant S.
Title
MAPK pathways in radiation responses.
Journal
Reference
Authors
Huang EJ, Reichardt LF.
Title
Trk receptors: roles in neuronal signal transduction.
Journal
Reference
Authors
Harper SJ, LoGrasso P.
Title
Signalling for survival and death in neurones: the role of stress-activated kinases, JNK and p38.
Journal
Reference
Authors
Takeda K, Ichijo H
Title
Neuronal p38 MAPK signalling: an emerging regulator of cell fate and function in the nervous system.
Journal
Reference
Authors
Yang SH, Sharrocks AD, Whitmarsh AJ.
Title
Transcriptional regulation by the MAP kinase signaling cascades.
Journal
Reference
Authors
Zhu X, Lee HG, Raina AK, Perry G, Smith MA.
Title
The role of mitogen-activated protein kinase pathways in Alzheimer's disease.
Journal
Reference
Authors
Cho H, Lee J, Kwak NJ, Lee KH, Rha S, Kim YH, Cho YY, Yang KH, Kim K, Lim Y.
Title
Silica induces nuclear factor-kappaB activation through TAK1 and NIK in Rat2 cell line.
Journal
Reference
Authors
Lemmon MA, Schlessinger J
Title
Cell signaling by receptor tyrosine kinases.
Journal
Reference
Authors
Skaper SD
Title
The neurotrophin family of neurotrophic factors: an overview.
Journal
Reference
Authors
Chu WM
Title
Tumor necrosis factor.
Journal
Reference
Authors
Newton K, Dixit VM
Title
Signaling in innate immunity and inflammation.
Journal
Reference
Authors
Gaestel M, Kotlyarov A, Kracht M
Title
Targeting innate immunity protein kinase signalling in inflammation.
Journal
Reference
Authors
Ajibade AA, Wang HY, Wang RF
Title
Cell type-specific function of TAK1 in innate immune signaling.
Journal
Reference
Authors
Turner MD, Nedjai B, Hurst T, Pennington DJ
Title
Cytokines and chemokines: At the crossroads of cell signalling and inflammatory disease.
Journal
Related pathway
char04070 Phosphatidylinositol signaling system
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