SSDB Best Search Result

Entry:gor:KTR9_0351 (363 a.a.)
Name:DNA primase, small subunit

Search Result : 108 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
gpo:GPOL_c47200 DNA primase, small subunit                         358     2069     0.832      357     
rha:RHA1_ro05108 possible DNA ligase (ATP), N-terminal             342     1578     0.666      341     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350     1576     0.621      354     
rer:RER_49750 conserved hypothetical protein                       346     1561     0.657      341     
mva:Mvan_5542 conserved hypothetical protein                       349     1501     0.612      353     
mmi:MMAR_5265 conserved hypothetical protein                       346     1461     0.622      339     
mul:MUL_4339 conserved hypothetical protein                        346     1450     0.619      339     
mtu:Rv3730c hypothetical protein                                   346     1439     0.589      353     
mtc:MT3835 conserved hypothetical protein                          346     1439     0.589      353     
mab:MAB_0280 Conserved hypothetical protein                        306     1346     0.630      311     
ase:ACPL_7075 DNA ligase (ATP)                                     341     1295     0.553      349     
sro:Sros_6714 DNA primase small subunit                            334     1242     0.575      341     
stp:Strop_1543 DNA primase, small subunit                          341     1239     0.544      344     
sgu:SGLAU_28045 hypothetical protein                               336     1227     0.534      341     
sen:SACE_1849 possible DNA ligase (ATP)                            347     1214     0.541      338     
sco:SCO6709 conserved hypothetical protein                         341     1213     0.534      341     
sct:SCAT_5514 conserved protein of unknown function                335     1211     0.544      340     
sgr:SGR_1023 conserved hypothetical protein                        345     1210     0.542      356     
sma:SAVERM_1696 putative DNA primase, small subunit                338     1207     0.532      348     
kfl:Kfla_3722 DNA polymerase LigD, polymerase domain pr            352     1185     0.528      358     
nca:Noca_3665 conserved hypothetical protein                       360     1148     0.515      373     
amd:AMED_2655 ATP-dependent DNA ligase                             338     1138     0.512      342     
ccyc:SCMU_06830 hypothetical protein                               727     1110     0.487      351     
nfa:NFA_25590 hypothetical protein                                 333     1100     0.488      340     
chy:CHY_0025 conserved hypothetical protein             K01971     293      571     0.333      300     
mlo:mll2077 probable ATP-dependent DNA ligase                      833      563     0.346      306     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      559     0.346      306     
mta:Moth_2082 conserved hypothetical protein            K01971     306      558     0.336      301     
sme:SM_b20685 putative DNA ligase                                  818      549     0.348      305     
scl:sce3523 unnamed protein product; High confidence in K01971     762      530     0.349      318     
ssy:SLG_04290 putative DNA ligase                       K01971     835      515     0.351      279     
dsy:DSY0616 hypothetical protein                        K01971     818      515     0.343      283     
swi:Swit_3982 DNA ligase D                              K01971     837      510     0.340      288     
xau:Xaut_4365 DNA ligase D                              K01971     886      508     0.346      324     
pde:Pden_4186 conserved hypothetical protein            K01971     330      504     0.320      325     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      504     0.337      326     
cpy:Cphy_1729 DNA ligase D                              K01971     813      501     0.338      296     
sno:Snov_0819 DNA ligase D                              K01971     842      499     0.341      299     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      492     0.355      296     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      488     0.348      270     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      483     0.320      322     
rle:pRL120229 putative DNA ligase family protein        K01971     881      482     0.325      323     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      479     0.336      292     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      476     0.339      292     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      475     0.319      304     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      473     0.320      278     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      472     0.326      319     
rpa:TX73_018915 DNA ligase D                            K01971     914      472     0.338      308     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      466     0.292      318     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      462     0.316      323     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      459     0.317      300     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      458     0.330      297     
phe:Phep_1702 DNA ligase D                              K01971     877      452     0.286      311     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      452     0.312      320     
oih:OB3034 hypothetical conserved protein               K01971     595      446     0.315      305     
ppu:PP_3260 DNA ligase D                                K01971     833      442     0.304      312     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      441     0.282      323     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      440     0.302      325     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      436     0.311      302     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      429     0.318      308     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      426     0.326      316     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      401     0.297      293     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      362     0.281      299     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      348     0.278      299     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      333     0.277      285     
ksk:KSE_05320 hypothetical protein                      K01971     173      311     0.386      171     
mcc:694462 fibroblast growth factor receptor substrate  K24039     492      152     0.230      361     
cjc:100405094 fibroblast growth factor receptor substra K24039     492      150     0.232      362     
hsa:10817 fibroblast growth factor receptor substrate 3 K24039     492      146     0.229      362     
ocu:100328715 fibroblast growth factor receptor substra K24039     494      145     0.238      365     
ptr:107975139 fibroblast growth factor receptor substra K24039     492      143     0.229      362     
aag:5580272 uncharacterized protein LOC5580272                     651      141     0.258      229     
fca:101100304 fibroblast growth factor receptor substra K24039     495      137     0.223      310     
hma:rrnAC2296 unknown                                              587      136     0.266      244     
vg:54989937 Haloarcula hispanica pleomorphic virus 4; t            587      134     0.262      244     
amj:102569676 transglutaminase 2                        K05625     688      134     0.313      134     
gmx:100776318 CRIB domain-containing protein RIC7                  209      132     0.266      154     
eca:ECA1821 transcription-repair coupling factor        K03723    1149      132     0.229      192     
vpa:VPA0685 MoxR-related protein                        K03924     327      132     0.264      265     
csa:Csal_1767 Uncharacterized protein UPF0065           K07795     327      128     0.269      245     
ssc:100624389 sulfotransferase 1C4-like                 K01025     362      127     0.250      160     
vvu:VV2_0154 MoxR-like ATPase in aerotolerance operon   K03924     327      125     0.273      275     
spu:105446221 uncharacterized protein K02A2.6-like                1352      124     0.236      309     
aor:AO090010000670 unnamed protein product; predicted p            454      122     0.256      176     
mja:MJ_0785 biotin synthetase, putative (bioB)          K28006     375      121     0.283      106     
ppp:112275613 uncharacterized protein                              467      118     0.227      308     
clv:102095730 erythroid membrane-associated protein     K12030     442      117     0.256      199     
vvi:100259737 growth-regulating factor 4 isoform X2                330      117     0.231      160     
sly:101245867 uncharacterized protein                              385      116     0.239      155     
pgi:PG_1767 lipoprotein, putative                                  346      115     0.247      239     
tca:657586 ubiquitin carboxyl-terminal hydrolase 31     K11852     880      114     0.231      229     
cge:103158746 C-type lectin domain family 19 member A i K27940     186      112     0.254      130     
ecb:100061106 sulfotransferase 1C4                      K01025     298      112     0.258      159     
kla:KLLA0_D01529g uncharacterized protein               K05530     501      112     0.235      102     
dme:Dmel_CG5321 uncharacterized protein, isoform C      K00471     413      111     0.235      221     
mdo:100029169 serine/threonine/tyrosine interacting lik K18047     313      110     0.259      162     
ddi:DDB_G0276473 NAD-dependent epimerase/dehydratase fa            363      109     0.321      78      
pti:PHATRDRAFT_34261 hypothetical protein                          219      108     0.281      96      
bta:783020 sulfotransferase 1C4                         K01025     298      108     0.259      162     
ehi:EHI_139070 hypothetical protein                                390      108     0.207      179     
pab:PAB1111 trpS tryptophanyl-tRNA synthetase           K01867     385      108     0.222      316     
dre:797439 beta-galactoside alpha-2,6-sialyltransferase K00779     453      106     0.231      195     
mtr:11406375 FBD-associated F-box protein At4g10400                433      104     0.231      160     
hpy:HP_0054 adenine/cytosine DNA methyltransferase      K00558     823      104     0.187      123     
smo:SELMODRAFT_6275 hypothetical protein                           174      101     0.309      94      
sshi:J5U23_02710 LSU ribosomal protein L7e (L30p)       K02907     158       98     0.265      132     
ame:726900 proteasome assembly chaperone 2              K11876     246       89     0.326      46      
cst:CLOST_0054 protein of unknown function                          60       76     0.317      41      

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