SSDB Best Search Result

Entry:lpc:LPC_1974 (296 a.a.)
Name:hypothetical protein
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 121 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      659     0.385      273     
scl:sce3523 unnamed protein product; High confidence in K01971     762      658     0.381      286     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      655     0.347      285     
sen:SACE_3394 ATP-dependent DNA ligase                             292      644     0.378      275     
amd:AMED_5203 ATP-dependent DNA ligase                  K01971     287      641     0.364      275     
swi:Swit_5282 DNA ligase D                              K01971     658      634     0.390      249     
chy:CHY_0025 conserved hypothetical protein             K01971     293      631     0.354      280     
dsy:DSY0616 hypothetical protein                        K01971     818      628     0.345      290     
sco:SCO6498 conserved hypothetical protein SC1E6.07     K01971     319      628     0.353      286     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      623     0.354      274     
cpy:Cphy_1729 DNA ligase D                              K01971     813      618     0.339      286     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      618     0.349      289     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      610     0.372      247     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      609     0.354      285     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      601     0.368      277     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      575     0.351      271     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      572     0.335      275     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      571     0.351      276     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      561     0.305      282     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      555     0.328      293     
mta:Moth_2082 conserved hypothetical protein            K01971     306      554     0.318      283     
ssy:SLG_04290 putative DNA ligase                       K01971     835      547     0.363      248     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      547     0.341      293     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      544     0.364      275     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      544     0.346      283     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      544     0.360      275     
ppu:PP_3260 DNA ligase D                                K01971     833      542     0.330      288     
oih:OB3034 hypothetical conserved protein               K01971     595      537     0.339      277     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      536     0.319      285     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      535     0.350      254     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      533     0.305      282     
sno:Snov_0819 DNA ligase D                              K01971     842      531     0.329      277     
sro:Sros_6714 DNA primase small subunit                            334      530     0.305      285     
phe:Phep_1702 DNA ligase D                              K01971     877      530     0.307      270     
pde:Pden_4186 conserved hypothetical protein            K01971     330      522     0.365      260     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      515     0.318      274     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350      514     0.322      289     
stp:Strop_1543 DNA primase, small subunit                          341      512     0.335      278     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      511     0.307      287     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      507     0.307      280     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      499     0.319      279     
rha:RHA1_ro05237 possible DNA ligase (ATP), C-terminal             323      494     0.281      274     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      493     0.309      288     
nfa:NFA_25590 hypothetical protein                                 333      488     0.276      293     
mva:Mvan_5542 conserved hypothetical protein                       349      486     0.299      288     
sct:SCAT_5514 conserved protein of unknown function                335      484     0.290      272     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      483     0.336      256     
rpa:TX73_018915 DNA ligase D                            K01971     914      483     0.294      289     
ccyc:SCMU_06830 hypothetical protein                               727      482     0.297      279     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      475     0.314      280     
sma:SAVERM_1696 putative DNA primase, small subunit                338      474     0.309      275     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      473     0.283      276     
mab:MAB_0280 Conserved hypothetical protein                        306      473     0.293      290     
mul:MUL_4339 conserved hypothetical protein                        346      473     0.290      279     
mmi:MMAR_5265 conserved hypothetical protein                       346      468     0.287      279     
mtu:Rv3730c hypothetical protein                                   346      465     0.289      291     
mtc:MT3835 conserved hypothetical protein                          346      465     0.289      291     
nca:Noca_2445 putative DNA ligase (ATP), C-terminal                326      460     0.280      271     
rle:pRL120229 putative DNA ligase family protein        K01971     881      460     0.299      284     
gpo:GPOL_c30660 DNA polymerase LigD                                318      456     0.277      271     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      454     0.285      291     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      449     0.296      274     
xau:Xaut_4365 DNA ligase D                              K01971     886      443     0.299      284     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      443     0.284      292     
sgr:SGR_1023 conserved hypothetical protein                        345      440     0.267      277     
ksk:KSE_05320 hypothetical protein                      K01971     173      412     0.430      151     
ehi:EHI_021380 U5 small nuclear ribonucleoprotein subun K12852     954      139     0.327      113     
mdm:139196032 uncharacterized protein                              517      130     0.224      308     
tre:TRIREDRAFT_79377 hypothetical protein                          837      130     0.245      151     
fps:FP0558 Probably involved in regulation of translati K06158     544      130     0.234      192     
sot:107058997 putative disease resistance protein RGA1            1242      128     0.223      247     
pfl:PFL_2341 putative gamma-glutamylputrescine syntheta K01915     458      128     0.250      168     
xla:735012 cyclin L2 L homeolog                         K23966     495      127     0.295      122     
vg:22112865 Enterococcus phage vB_Efae230P-4; putative             519      126     0.258      190     
tru:101061049 uncharacterized protein hdac12 isoform X1            339      125     0.282      142     
gmx:100802630 E3 ubiquitin-protein ligase UPL1-like     K10592    3654      125     0.213      211     
mmp:MMP1436 Cell division protein FtsZ                  K03531     360      124     0.237      186     
sly:101268831 protein STICHEL-like 4                              1211      121     0.255      274     
ath:AT5G03250 Phototropic-responsive NPH3 family protei            592      121     0.277      177     
aag:5571723 uncharacterized protein LOC5571723 isoform  K18415     787      120     0.257      167     
ncr:NCU03410 hypothetical protein                                  290      120     0.307      140     
xtr:595011 cyclin-L2                                    K23966     497      120     0.229      240     
dre:100148903 uncharacterized protein SYNPCC7002_A1628             354      120     0.294      85      
cit:102611555 probable phosphoinositide phosphatase SAC           1663      118     0.228      268     
mth:MTH_1835 2-phosphoglycerate kinase homolog          K07105     321      118     0.233      206     
ola:101155869 uncharacterized protein LOC101155869 isof            341      115     0.275      142     
cre:CHLRE_14g632300v5 uncharacterized protein                      413      114     0.329      79      
lmo:lmo0011 mevalonate diphosphate decarboxylase        K01597     323      114     0.333      75      
cpoc:100714030 prostaglandin G/H synthase 1             K00509     552      113     0.248      125     
ptr:129143970 chondroitin sulfate proteoglycan 4-like              245      113     0.187      134     
mma:MM_1142 glycosyltransferase                                    379      113     0.246      134     
cin:100178527 uncharacterized protein LOC100178527 isof            585      112     0.250      132     
ava:Ava_4730 Thioesterase                                          252      111     0.247      239     
lin:lin0011 similar to mevalonate diphosphate decarboxy K01597     339      111     0.333      75      
cau:Caur_0935 response regulator receiver               K07667     227      110     0.262      191     
lpn:lpg2107 hypothetical protein                        K09930     284      110     0.210      119     
nta:107766802 BRI1 kinase inhibitor 1                   K14499     317      109     0.292      96      
nve:116620660 UBX domain-containing protein 11-like                252      109     0.209      211     
mxa:MXAN_5995 DNA-binding reponse regulator             K02483     231      108     0.249      189     
gsu:GSU2178 hypothetical protein                                   210      108     0.300      80      
ani:ANIA_03636 hypothetical protein                     K01771     485      107     0.250      208     
fvr:FVEG_03320 hypothetical protein                                537      106     0.226      217     
yen:YE2665 probable pili assembly chaperone             K15540     244      106     0.291      134     
osa:4336179 cytochrome P450 71A9                        K20617     511      105     0.265      170     
pif:PITG_07444 cleavage induced hypothetical protein               106      104     0.321      84      
aga:133391273 uncharacterized protein LOC133391273                 441      104     0.241      141     
rno:134483172 disks large homolog 5-like                           147      104     0.235      119     
amj:102572544 SNAP associated protein                   K20002     219      102     0.255      102     
mac:MA_1269 response regulator receiver                            146      102     0.321      78      
cge:100766910 pre-B lymphocyte protein 3 isoform X1     K06553     123      101     0.278      97      
cps:CPS_2505 ErfK/YbiS/YcfS/YnhG family protein                    171      100     0.306      85      
sto:STK_01250 hypothetical protein                                 154      100     0.270      122     
anb:ANA_C12403 RusA-like endodeoxyribonuclease                     136       98     0.243      140     
ame:102655764 uncharacterized protein LOC102655764      K28109     146       98     0.269      108     
cth:Cthe_1241 nicotinate (nicotinamide) nucleotide aden K00969     206       98     0.325      83      
hma:rrnAC1439 unknown                                              165       98     0.225      138     
eca:ECA2524 ribosomal-protein-alanine acetyltransferase K03790     194       98     0.353      51      
cst:CLOST_1181 protein of unknown function                         109       97     0.287      80      
dra:DR_1439 hypothetical protein                                   175       97     0.314      70      
ecb:100068786 paired immunoglobulin-like type 2 recepto K15411     239       95     0.245      98      
vch:VC_1858 conserved hypothetical protein                          70       83     0.356      59      

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