SSDB Best Search Result

Entry:pmw:B2K_25615 (301 a.a.)
Name:DNA polymerase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 81 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304     1047     0.526      291     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      683     0.412      267     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      642     0.349      289     
mta:Moth_2082 conserved hypothetical protein            K01971     306      632     0.381      289     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      617     0.364      291     
phe:Phep_1702 DNA ligase D                              K01971     877      602     0.331      281     
oih:OB3034 hypothetical conserved protein               K01971     595      564     0.349      284     
stp:Strop_3967 DNA primase, small subunit               K01971     302      563     0.380      300     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      555     0.357      286     
chy:CHY_0025 conserved hypothetical protein             K01971     293      551     0.345      287     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      535     0.352      293     
sco:SCO6709 conserved hypothetical protein                         341      535     0.346      301     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647      527     0.334      299     
sgu:SGLAU_28045 hypothetical protein                               336      518     0.339      298     
amd:AMED_2655 ATP-dependent DNA ligase                             338      512     0.350      303     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      510     0.343      277     
sct:SCAT_5514 conserved protein of unknown function                335      509     0.340      297     
nca:Noca_2856 DNA primase-like protein                  K01971     455      502     0.340      285     
rer:RER_49750 conserved hypothetical protein                       346      489     0.338      311     
sgr:SGR_1023 conserved hypothetical protein                        345      485     0.324      287     
rha:RHA1_ro05237 possible DNA ligase (ATP), C-terminal             323      485     0.326      301     
sma:SAVERM_1696 putative DNA primase, small subunit                338      484     0.316      297     
mab:MAB_4341 Conserved hypothetical protein                        409      476     0.331      278     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      475     0.319      304     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335      474     0.313      291     
nfa:NFA_13650 hypothetical protein                                 320      470     0.315      273     
gpo:GPOL_c30660 DNA polymerase LigD                                318      465     0.305      295     
msm:MSMEG_6301 DNA polymerase LigD, polymerase domain              350      462     0.314      299     
mtu:Rv3730c hypothetical protein                                   346      457     0.318      296     
mtc:MT3835 conserved hypothetical protein                          346      457     0.318      296     
mul:MUL_4339 conserved hypothetical protein                        346      453     0.317      300     
mmi:MMAR_5265 conserved hypothetical protein                       346      452     0.317      300     
xau:Xaut_4365 DNA ligase D                              K01971     886      450     0.323      300     
mva:Mvan_5542 conserved hypothetical protein                       349      446     0.312      298     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      443     0.316      282     
sro:Sros_6714 DNA primase small subunit                            334      442     0.301      289     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      440     0.321      293     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      439     0.314      290     
scl:sce3523 unnamed protein product; High confidence in K01971     762      436     0.314      296     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      433     0.299      284     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      431     0.323      254     
ret:RHE_CH00617 putative DNA ligase protein             K01971     659      422     0.316      294     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      422     0.323      279     
rpa:TX73_018915 DNA ligase D                            K01971     914      421     0.317      262     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      418     0.339      254     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      417     0.307      280     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      417     0.298      272     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      413     0.308      295     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      399     0.289      273     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      383     0.294      279     
rle:pRL120229 putative DNA ligase family protein        K01971     881      382     0.300      270     
sno:Snov_0819 DNA ligase D                              K01971     842      376     0.301      266     
ssy:SLG_04290 putative DNA ligase                       K01971     835      375     0.309      272     
cpy:Cphy_1729 DNA ligase D                              K01971     813      370     0.298      275     
dsy:DSY0616 hypothetical protein                        K01971     818      369     0.295      264     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      368     0.306      284     
ppu:PP_3260 DNA ligase D                                K01971     833      361     0.279      283     
pde:Pden_4186 conserved hypothetical protein            K01971     330      358     0.285      284     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901      357     0.282      277     
swi:Swit_5282 DNA ligase D                              K01971     658      355     0.282      259     
sml:Smlt2530 putative DNA ligase family protein         K01971     849      354     0.311      267     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      349     0.287      265     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      349     0.306      281     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      340     0.306      252     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      338     0.293      273     
ksk:KSE_05320 hypothetical protein                      K01971     173      254     0.320      169     
cne:CNH00520 intra-Golgi transport-related protein, put K20293     742      141     0.236      229     
ban:BA_5182 hypothetical protein                                   222      132     0.244      197     
bce:BC4949 hypothetical protein                                    222      131     0.250      204     
pam:PANA_3947 TypA                                      K06207     566      128     0.232      224     
ecb:106783327 testis-specific H1 histone                           262      123     0.229      192     
ssc:100739612 LOW QUALITY PROTEIN: SUMO-activating enzy K10685     659      122     0.227      198     
vg:5076531 Mycoreovirus 3; P9                                      380      119     0.265      166     
rno:308508 SUMO-activating enzyme subunit 2             K10685     639      118     0.234      214     
afn:Acfer_1248 tyrosine recombinase XerC                K03733     311      117     0.264      242     
vvi:100232939 flavonol synthase/flavanone 3-hydroxylase K05278     335      116     0.257      175     
amj:102576552 chondroitin polymerizing factor 2         K03419     612      115     0.242      252     
ctt:CtCNB1_1065 NADH dehydrogenase I, D subunit         K00333     417      114     0.235      302     
tps:THAPSDRAFT_3098 predicted protein                   K07575     195      113     0.276      145     
neu:NE0893 conserved hypothetical protein               K10954     328      110     0.247      198     
tcr:511649.14 hypothetical protein                                 200      107     0.264      121     

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