KEGG   PATHWAY: cbr00970
Entry
cbr00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Caenorhabditis briggsae (nematode)
Class
Genetic Information Processing; Translation
Pathway map
cbr00970  Aminoacyl-tRNA biosynthesis
cbr00970

Organism
Caenorhabditis briggsae (nematode) [GN:cbr]
Gene
CBG_00621  Cbr-fars-3; Protein CBR-FARS-3 [KO:K01890] [EC:6.1.1.20]
CBG_01669  Cbr-sars-2; Protein CBR-SARS-2 [KO:K01875] [EC:6.1.1.11]
CBG_02577  Cbr-rars-2; Protein CBR-RARS-2 [KO:K01887] [EC:6.1.1.19]
CBG_02888  Cbr-aars-1; Protein CBR-AARS-1 [KO:K01872] [EC:6.1.1.7]
CBG_03144  Cbr-tars-1; Protein CBR-TARS-1 [KO:K01868] [EC:6.1.1.3]
CBG_03435  Cbr-sars-1; Protein CBR-SARS-1 [KO:K01875] [EC:6.1.1.11]
CBG_04128  Cbr-cars-1; Protein CBR-CARS-1 [KO:K01883] [EC:6.1.1.16]
CBG_06108  Cbr-mars-1; Protein CBR-MARS-1 [KO:K01874] [EC:6.1.1.10]
CBG_08035  Cbr-vars-2; Protein CBR-VARS-2 [KO:K01873] [EC:6.1.1.9]
CBG_08395  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CBG_09712  Cbr-secs-1; Protein CBR-SECS-1 [KO:K03341] [EC:2.9.1.2]
CBG_10076  Cbr-dars-1; Protein CBR-DARS-1 [KO:K22503] [EC:6.1.1.12]
CBG_11384  Cbr-vars-1; Protein CBR-VARS-1 [KO:K01873] [EC:6.1.1.9]
CBG_11694  Cbr-pstk-1; Protein CBR-PSTK-1 [KO:K10837] [EC:2.7.1.164]
CBG_11879  Cbr-lars-2; Protein CBR-LARS-2 [KO:K01869] [EC:6.1.1.4]
CBG_12085  Cbr-aars-2; Protein CBR-AARS-2 [KO:K01872] [EC:6.1.1.7]
CBG_12225  Cbr-iars-2; Protein CBR-IARS-2 [KO:K01870] [EC:6.1.1.5]
CBG_12564  Cbr-fars-1; Protein CBR-FARS-1 [KO:K01889] [EC:6.1.1.20]
CBG_13258  [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CBG_13278  Cbr-nars-2; Protein CBR-NARS-2 [KO:K01893] [EC:6.1.1.22]
CBG_13545  Cbr-ears-2; Protein CBR-EARS-2 [KO:K01885] [EC:6.1.1.17]
CBG_13773  Cbr-qars-1; Protein CBR-QARS-1 [KO:K01886] [EC:6.1.1.18]
CBG_17615  [KO:K01892] [EC:6.1.1.21]
CBG_17616  Cbr-hars-1; Protein CBR-HARS-1 [KO:K01892] [EC:6.1.1.21]
CBG_18188  Cbr-rars-1; Protein CBR-RARS-1 [KO:K01887] [EC:6.1.1.19]
CBG_19783  [KO:K01866] [EC:6.1.1.1]
CBG_20159  Cbr-lars-1; Protein CBR-LARS-1 [KO:K01869] [EC:6.1.1.4]
CBG_20320  Cbr-wars-1; Protein CBR-WARS-1 [KO:K01867] [EC:6.1.1.2]
CBG_20478  Cbr-nars-1; Protein CBR-NARS-1 [KO:K01893] [EC:6.1.1.22]
CBG_21169  Cbr-wars-2; Protein CBR-WARS-2 [KO:K01867] [EC:6.1.1.2]
CBG_21320  Cbr-gars-1; Protein CBR-GARS-1 [KO:K01880] [EC:6.1.1.14]
CBG_21346  Cbr-ears-1; Protein CBR-EARS-1 [KO:K01885] [EC:6.1.1.17]
CBG_23362  Cbr-dars-2; Protein CBR-DARS-2 [KO:K01876] [EC:6.1.1.12]
CBG_23664  [KO:K01881] [EC:6.1.1.15]
CBG_23667  Cbr-pars-2; Protein CBR-PARS-2 [KO:K01881] [EC:6.1.1.15]
CBG_23754  Cbr-iars-1; Protein CBR-IARS-1 [KO:K01870] [EC:6.1.1.5]
CBG_24153  Cbr-pars-1; Protein CBR-PARS-1 [KO:K01881] [EC:6.1.1.15]
CBG_24520  Cbr-fars-2; Protein CBR-FARS-2 [KO:K01889] [EC:6.1.1.20]
CBG_24742  Cbr-kars-1; Protein CBR-KARS-1 [KO:K04567] [EC:6.1.1.6]
CBG_26433  Cbr-yars-1; Protein CBR-YARS-1 [KO:K01866] [EC:6.1.1.1]
tRNA-Ala  [KO:K14218]
tRNA-Arg  [KO:K14219]
tRNA-Asn  [KO:K14220]
tRNA-Asp  [KO:K14221]
tRNA-Cys  [KO:K14222]
tRNA-Gln  [KO:K14223]
tRNA-Gly  [KO:K14225]
tRNA-His  [KO:K14226]
tRNA-Leu-1  [KO:K14228]
tRNA-Leu-2  [KO:K14228]
tRNA-Lys  [KO:K14229]
tRNA-Met  [KO:K14230]
tRNA-Phe  [KO:K14231]
tRNA-Pro  [KO:K14232]
tRNA-Thr  [KO:K14234]
tRNA-Trp  [KO:K14235]
tRNA-Tyr  [KO:K14236]
tRNA-Val  [KO:K14237]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
cbr00250  Alanine, aspartate and glutamate metabolism
cbr00260  Glycine, serine and threonine metabolism
cbr00270  Cysteine and methionine metabolism
cbr00290  Valine, leucine and isoleucine biosynthesis
cbr00330  Arginine and proline metabolism
cbr00340  Histidine metabolism
cbr00380  Tryptophan metabolism
cbr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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