KEGG   PATHWAY: jcu00510
Entry
jcu00510                    Pathway                                
Name
N-Glycan biosynthesis - Jatropha curcas (Barbados nut)
Description
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD:M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS:H00118 H00119].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
jcu00510  N-Glycan biosynthesis
jcu00510

Module
jcu_M00072  N-glycosylation by oligosaccharyltransferase [PATH:jcu00510]
jcu_M00073  N-glycan precursor trimming [PATH:jcu00510]
Other DBs
GO: 0006487
Organism
Jatropha curcas (Barbados nut) [GN:jcu]
Gene
105628038  [KO:K00902] [EC:2.7.1.108]
105628630  [KO:K12345] [EC:1.3.1.22 1.3.1.94]
105631965  [KO:K12670]
105633817  [KO:K00737] [EC:2.4.1.144]
105633984  [KO:K23741]
105635193  [KO:K12666]
105635234  [KO:K00721] [EC:2.4.1.83]
105635431  [KO:K00726] [EC:2.4.1.101]
105636116  [KO:K01228] [EC:3.2.1.106]
105636429  [KO:K12668]
105636515  [KO:K26501]
105637031  [KO:K03843] [EC:2.4.1.132 2.4.1.257]
105637260  [KO:K01230] [EC:3.2.1.113]
105637772  [KO:K07151] [EC:2.4.99.18]
105637884  [KO:K26502]
105638725  [KO:K03848] [EC:2.4.1.267]
105638987  [KO:K28202]
105639214  [KO:K03846] [EC:2.4.1.259 2.4.1.261]
105639365  [KO:K26502]
105639596  [KO:K12670]
105639805  [KO:K07151] [EC:2.4.99.18]
105640591  [KO:K09659]
105641183  [KO:K09658]
105641302  [KO:K00737] [EC:2.4.1.144]
105641508  [KO:K00736] [EC:2.4.1.143]
105642187  [KO:K07252] [EC:3.6.1.43]
105642251  [KO:K01231] [EC:3.2.1.114]
105642496  [KO:K03845] [EC:2.4.1.258]
105643234  [KO:K03847] [EC:2.4.1.260]
105643253  [KO:K03849] [EC:2.4.1.265]
105644523  [KO:K12667]
105644611  [KO:K07441] [EC:2.4.1.141]
105644700  [KO:K00737] [EC:2.4.1.144]
105645053  [KO:K01001] [EC:2.7.8.15]
105645965  [KO:K03844] [EC:2.4.1.131]
105646855  [KO:K05546] [EC:3.2.1.207]
105647574  [KO:K07432] [EC:2.4.1.141]
105647703  [KO:K00729] [EC:2.4.1.117]
105649379  [KO:K19478]
105649562  [KO:K03850] [EC:2.4.1.256]
105650914  [KO:K12666]
Compound
C00096  GDP-mannose
C00110  Dolichyl phosphate
C00381  Dolichol
C00621  Dolichyl diphosphate
C01246  Dolichyl beta-D-glucosyl phosphate
C03021  Protein asparagine
C03862  Dolichyl phosphate D-mannose
C06081  Polyprenol
C22974  ditrans,polycis-Polyprenal
C22975  Dolichal
G00001  N-Acetyl-D-glucosaminyldiphosphodolichol
G00002  N,N'-Chitobiosyldiphosphodolichol
G00003  
G00004  
G00005  
G00006  
G00007  
G00008  
G00009  
G00010  
G00011  
G00012  
G00013  
G00014  
G00015  
G00016  Core fucose
G00017  
G00018  DS 3
G00019  
G00020  
G00021  
G00022  
G00171  
G10526  
G10595  
G10596  
G10597  
G10598  
G10599  
G10694  
Reference
PMID:9111134
  Authors
Schutzbach JS.
  Title
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides.
  Journal
Glycoconj J 14:175-82 (1997)
DOI:10.1023/A:1018533620002
Reference
  Authors
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P.
  Title
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate.
  Journal
Mol Biol Evol 19:1451-63 (2002)
DOI:10.1093/oxfordjournals.molbev.a004208
Reference
  Authors
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C.
  Title
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis.
  Journal
J Biol Chem 278:22498-505 (2003)
DOI:10.1074/jbc.M302850200
Reference
  Authors
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N.
  Title
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
  Journal
J Biol Chem 276:21828-40 (2001)
DOI:10.1074/jbc.M010896200
Reference
  Authors
Frank CG, Aebi M.
  Title
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis.
  Journal
Glycobiology 15:1156-63 (2005)
DOI:10.1093/glycob/cwj002
Reference
  Authors
O'Reilly MK, Zhang G, Imperiali B.
  Title
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis.
  Journal
Biochemistry 45:9593-603 (2006)
DOI:10.1021/bi060878o
Related
pathway
jcu00051  Fructose and mannose metabolism
jcu00511  Other glycan degradation
jcu00513  Various types of N-glycan biosynthesis
jcu00520  Amino sugar and nucleotide sugar metabolism
jcu00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
jcu00900  Terpenoid backbone biosynthesis
KO pathway
ko00510   

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