KEGG   PATHWAY: ncs00510
Entry
ncs00510                    Pathway                                
Name
N-Glycan biosynthesis - Naumovozyma castellii
Description
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD:M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS:H00118 H00119].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
ncs00510  N-Glycan biosynthesis
ncs00510

Module
ncs_M00055  N-glycan precursor biosynthesis [PATH:ncs00510]
ncs_M00072  N-glycosylation by oligosaccharyltransferase [PATH:ncs00510]
ncs_M00073  N-glycan precursor trimming [PATH:ncs00510]
ncs_M00074  N-glycan biosynthesis, high-mannose type [PATH:ncs00510]
Other DBs
GO: 0006487
Organism
Naumovozyma castellii [GN:ncs]
Gene
NCAS_0A13460  NCAS0A13460; hypothetical protein [KO:K12345] [EC:1.3.1.22 1.3.1.94]
NCAS_0A12680  NCAS0A12680; hypothetical protein [KO:K00902] [EC:2.7.1.108]
NCAS_0H01210  NCAS0H01210; hypothetical protein [KO:K01001] [EC:2.7.8.15]
NCAS_0G01290  NCAS0G01290; hypothetical protein [KO:K00729] [EC:2.4.1.117]
NCAS_0C05680  NCAS0C05680; hypothetical protein [KO:K07432] [EC:2.4.1.141]
NCAS_0A10730  NCAS0A10730; hypothetical protein [KO:K07441] [EC:2.4.1.141]
NCAS_0A15230  NCAS0A15230; hypothetical protein [KO:K00721] [EC:2.4.1.83]
NCAS_0I01090  NCAS0I01090; hypothetical protein [KO:K03842] [EC:2.4.1.142]
NCAS_0D04140  NCAS0D04140; hypothetical protein [KO:K03843] [EC:2.4.1.132 2.4.1.257]
NCAS_0G03240  NCAS0G03240; hypothetical protein [KO:K03844] [EC:2.4.1.131]
NCAS_0E02510  NCAS0E02510; hypothetical protein [KO:K03845] [EC:2.4.1.258]
NCAS_0G01440  NCAS0G01440; hypothetical protein [KO:K03846] [EC:2.4.1.259 2.4.1.261]
NCAS_0A05360  NCAS0A05360; hypothetical protein [KO:K03847] [EC:2.4.1.260]
NCAS_0D02160  NCAS0D02160; hypothetical protein [KO:K03848] [EC:2.4.1.267]
NCAS_0G00450  NCAS0G00450; hypothetical protein [KO:K03849] [EC:2.4.1.265]
NCAS_0F00630  NCAS0F00630; hypothetical protein [KO:K03850] [EC:2.4.1.256]
NCAS_0A01720  NCAS0A01720; hypothetical protein [KO:K07151] [EC:2.4.99.18]
NCAS_0A01500  NCAS0A01500; hypothetical protein [KO:K12666]
NCAS_0D01100  NCAS0D01100; hypothetical protein [KO:K12667]
NCAS_0G02660  NCAS0G02660; hypothetical protein [KO:K12668]
NCAS_0H02690  NCAS0H02690; hypothetical protein [KO:K12669]
NCAS_0B06690  NCAS0B06690; hypothetical protein [KO:K12669]
NCAS_0I00780  NCAS0I00780; hypothetical protein [KO:K12670]
NCAS_0G01540  NCAS0G01540; hypothetical protein [KO:K00730]
NCAS_0E00400  NCAS0E00400; hypothetical protein [KO:K12691]
NCAS_0A02090  NCAS0A02090; hypothetical protein [KO:K07252] [EC:3.6.1.43]
NCAS_0A01760  NCAS0A01760; hypothetical protein [KO:K01228] [EC:3.2.1.106]
NCAS_0H01360  NCAS0H01360; hypothetical protein [KO:K05546] [EC:3.2.1.207]
NCAS_0J02160  NCAS0J02160; hypothetical protein [KO:K23741] [EC:3.2.1.209]
NCAS_0J00430  NCAS0J00430; hypothetical protein [KO:K01230] [EC:3.2.1.113]
Compound
C00096  GDP-mannose
C00110  Dolichyl phosphate
C00381  Dolichol
C00621  Dolichyl diphosphate
C01246  Dolichyl beta-D-glucosyl phosphate
C03021  Protein asparagine
C03862  Dolichyl phosphate D-mannose
C06081  Polyprenol
G00001  N-Acetyl-D-glucosaminyldiphosphodolichol
G00002  N,N'-Chitobiosyldiphosphodolichol
G00003   
G00004   
G00005   
G00006   
G00007   
G00008   
G00009   
G00010   
G00011   
G00012   
G00013   
G00014   
G00015   
G00016  Core fucose
G00017   
G00018  DS 3
G00019   
G00020   
G00021   
G00022   
G00171   
G10526   
G10595   
G10596   
G10597   
G10598   
G10599   
G10694   
Reference
PMID:9111134
  Authors
Schutzbach JS.
  Title
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides.
  Journal
Glycoconj J 14:175-82 (1997)
DOI:10.1023/A:1018533620002
Reference
  Authors
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P.
  Title
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate.
  Journal
Mol Biol Evol 19:1451-63 (2002)
DOI:10.1093/oxfordjournals.molbev.a004208
Reference
  Authors
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C.
  Title
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis.
  Journal
J Biol Chem 278:22498-505 (2003)
DOI:10.1074/jbc.M302850200
Reference
  Authors
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N.
  Title
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
  Journal
J Biol Chem 276:21828-40 (2001)
DOI:10.1074/jbc.M010896200
Reference
  Authors
Frank CG, Aebi M.
  Title
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis.
  Journal
Glycobiology 15:1156-63 (2005)
DOI:10.1093/glycob/cwj002
Reference
  Authors
O'Reilly MK, Zhang G, Imperiali B.
  Title
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis.
  Journal
Biochemistry 45:9593-603 (2006)
DOI:10.1021/bi060878o
Related
pathway
ncs00051  Fructose and mannose metabolism
ncs00511  Other glycan degradation
ncs00513  Various types of N-glycan biosynthesis
ncs00515  Mannose type O-glycan biosynthesis
ncs00520  Amino sugar and nucleotide sugar metabolism
ncs00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ncs00900  Terpenoid backbone biosynthesis
KO pathway
ko00510   
LinkDB

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