KEGG   PATHWAY: osa00053
Entry
osa00053                    Pathway                                
Name
Ascorbate and aldarate metabolism - Oryza sativa japonica (Japanese rice)
Class
Metabolism; Carbohydrate metabolism
Pathway map
osa00053  Ascorbate and aldarate metabolism
osa00053

Module
osa_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:osa00053]
osa_M00994  UDP-GlcA biosynthesis, myo-inositol => GlcA => UDP-GlcA [PATH:osa00053]
osa_M00999  UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:osa00053]
Other DBs
GO: 0019852 0019577 0019572
Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
136356546  [KO:K00002] [EC:1.1.1.2]
4325042  [KO:K14190] [EC:2.7.7.69]
4327475  [KO:K00002] [EC:1.1.1.2]
4327476  [KO:K00002] [EC:1.1.1.2]
4327488  [KO:K00423] [EC:1.10.3.3]
4327936  [KO:K00103] [EC:1.1.3.8]
4328142  [KO:K00103] [EC:1.1.3.8]
4328143  [KO:K00103] [EC:1.1.3.8]
4329643  APX8; probable L-ascorbate peroxidase 8, chloroplastic isoform 1 [KO:K00434] [EC:1.11.1.11]
4330146  [KO:K00128] [EC:1.2.1.3]
4330149  [KO:K00128] [EC:1.2.1.3]
4330468  49D11.20b; monodehydroascorbate reductase (NADH) 1, peroxisomal [KO:K08232] [EC:1.6.5.4]
4330469  49D11.20a; monodehydroascorbate reductase (NADH) 2, peroxisomal [KO:K08232] [EC:1.6.5.4]
4330612  [KO:K00128] [EC:1.2.1.3]
4330975  [KO:K08679] [EC:5.1.3.6]
4332258  [KO:K08679] [EC:5.1.3.6]
4332474  APX1; L-ascorbate peroxidase 1, cytosolic [KO:K00434] [EC:1.11.1.11]
4333156  Os-UGD1; UDP-glucose 6-dehydrogenase 1 [KO:K00012] [EC:1.1.1.22]
4333257  [KO:K00103] [EC:1.1.3.8]
4333347  [KO:K10047] [EC:3.1.3.25 3.1.3.93]
4333410  Os-UGD2; UDP-glucose 6-dehydrogenase 2 [KO:K00012] [EC:1.1.1.22]
4334169  Os-UGD3; uDP-glucose 6-dehydrogenase 3 [KO:K00012] [EC:1.1.1.22]
4335202  APX3; probable L-ascorbate peroxidase 3, peroxisomal [KO:K00434] [EC:1.11.1.11]
4335896  APX7; probable L-ascorbate peroxidase 7, chloroplastic [KO:K00434] [EC:1.11.1.11]
4336538  [KO:K00128] [EC:1.2.1.3]
4337622  [KO:K21888] [EC:1.8.5.1 2.5.1.18]
4338987  [KO:K00002] [EC:1.1.1.2]
4339090  [KO:K00002] [EC:1.1.1.2]
4339141  [KO:K00423] [EC:1.10.3.3]
4340350  [KO:K08679] [EC:5.1.3.6]
4340581  [KO:K21888] [EC:1.8.5.1 2.5.1.18]
4340725  [KO:K00128] [EC:1.2.1.3]
4341305  P0456F09.5; probable inositol oxygenase [KO:K00469] [EC:1.13.99.1]
4341335  [KO:K00423] [EC:1.10.3.3]
4341337  [KO:K00423] [EC:1.10.3.3]
4341967  P0596H10.4; uDP-sugar pyrophosphorylase [KO:K12447] [EC:2.7.7.64]
4342620  [KO:K18649] [EC:3.1.3.25 3.1.3.93 3.1.3.15]
4344397  APX2; L-ascorbate peroxidase 2, cytosolic [KO:K00434] [EC:1.11.1.11]
4344509  [KO:K00103] [EC:1.1.3.8]
4344670  MDAR5; monodehydroascorbate reductase (NADH) 5, chloroplastic isoform 1 [KO:K08232] [EC:1.6.5.4]
4346054  [KO:K00103] [EC:1.1.3.8]
4346094  [KO:K08679] [EC:5.1.3.6]
4346247  APX4; probable L-ascorbate peroxidase 4, peroxisomal [KO:K00434] [EC:1.11.1.11]
4346299  [KO:K08232] [EC:1.6.5.4]
4347172  [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
4347499  [KO:K08679] [EC:5.1.3.6]
4347885  [KO:K08232] [EC:1.6.5.4]
4348636  GME-1; gDP-mannose 3,5-epimerase 1 [KO:K10046] [EC:5.1.3.18 5.1.3.-]
4349749  GLDH1; L-galactono-1,4-lactone dehydrogenase 1, mitochondrial [KO:K00225] [EC:1.3.2.3]
4349966  [KO:K00128] [EC:1.2.1.3]
4350084  [KO:K16190] [EC:2.7.1.43]
4350816  GME-2; GDP-mannose 3,5-epimerase 2 [KO:K10046] [EC:5.1.3.18 5.1.3.-]
4351464  GLDH2; L-galactono-1,4-lactone dehydrogenase 2, mitochondrial [KO:K00225] [EC:1.3.2.3]
4351663  APX6; probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial [KO:K00434] [EC:1.11.1.11]
4351664  APX5; probable L-ascorbate peroxidase 5, chloroplastic [KO:K00434] [EC:1.11.1.11]
4351698  [KO:K14190] [EC:2.7.7.69]
4352146  Os-UGD4; UDP-glucose 6-dehydrogenase 4 [KO:K00012] [EC:1.1.1.22]
4352147  Os-UGD5; UDP-glucose 6-dehydrogenase 5 isoform X1 [KO:K00012] [EC:1.1.1.22]
4352223  [KO:K17744] [EC:1.1.1.316]
4352773  [KO:K14190] [EC:2.7.7.69]
9269342  [KO:K00434] [EC:1.11.1.11]
9271186  [KO:K00128] [EC:1.2.1.3]
9271397  [KO:K00002] [EC:1.1.1.2]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00072  Ascorbate
C00096  GDP-mannose
C00137  myo-Inositol
C00167  UDP-glucuronate
C00191  D-Glucuronate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00333  D-Galacturonate
C00433  2,5-Dioxopentanoate
C00545  L-Arabinonate
C00558  D-Tagaturonate
C00617  UDP-D-galacturonate
C00618  3-Dehydro-L-gulonate
C00652  D-Arabinono-1,4-lactone
C00679  5-Dehydro-4-deoxy-D-glucarate
C00684  2-Dehydro-3-deoxy-L-arabinonate
C00800  L-Gulonate
C00818  D-Glucarate
C00878  D-Arabinonate
C00879  D-Galactarate
C01040  L-Gulono-1,4-lactone
C01041  Monodehydroascorbate
C01101  L-Ribulose 5-phosphate
C01114  L-Arabinono-1,4-lactone
C01115  L-Galactono-1,4-lactone
C01146  2-Hydroxy-3-oxopropanoate
C01620  Threonate
C01825  L-Galactose
C02280  GDP-L-galactose
C02670  D-Glucuronolactone
C03033  beta-D-Glucuronoside
C03064  3-Dehydro-L-threonate
C03289  L-xylo-Hexulonolactone
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C03921  2-Dehydro-3-deoxy-D-glucarate
C04037  1-Phospho-alpha-D-galacturonate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C05422  Dehydroascorbate
C06316  Dehydro-D-arabinono-1,4-lactone
C14899  3-Dehydro-L-gulonate 6-phosphate
C15923  L-Gulose
C15924  L-Gulose 1-phosphate
C15925  GDP-L-gulose
C15926  beta-L-Galactose 1-phosphate
C15930  L-Galactonate
C16186  L-Ascorbate 6-phosphate
C20889  D-Galactaro-1,5-lactone
C20896  D-Galactaro-1,4-lactone
C21955  L-Galactono-1,5-lactone
Reference
PMID:17222174
  Authors
Linster CL, Van Schaftingen E
  Title
Vitamin C. Biosynthesis, recycling and degradation in mammals.
  Journal
FEBS J 274:1-22 (2007)
DOI:10.1111/j.1742-4658.2006.05607.x
Reference
PMID:15564123
  Authors
Valpuesta V, Botella MA.
  Title
Biosynthesis of L-ascorbic acid in plants: new pathways for an old antioxidant.
  Journal
Trends Plant Sci 9:573-7 (2004)
DOI:10.1016/j.tplants.2004.10.002
Reference
PMID:10517845
  Authors
Davey MW, Gilot C, Persiau G, Ostergaard J, Han Y, Bauw GC, Van Montagu MC.
  Title
Ascorbate biosynthesis in Arabidopsis cell suspension culture.
  Journal
Plant Physiol 121:535-43 (1999)
DOI:10.1104/pp.121.2.535
Reference
PMID:16595667
  Authors
Conklin PL, Gatzek S, Wheeler GL, Dowdle J, Raymond MJ, Rolinski S, Isupov M, Littlechild JA, Smirnoff N.
  Title
Arabidopsis thaliana VTC4 encodes L-galactose-1-P phosphatase, a plant ascorbic acid biosynthetic enzyme.
  Journal
J Biol Chem 281:15662-70 (2006)
DOI:10.1074/jbc.M601409200
Reference
PMID:17462988
  Authors
Linster CL, Gomez TA, Christensen KC, Adler LN, Young BD, Brenner C, Clarke SG.
  Title
Arabidopsis VTC2 Encodes a GDP-L-Galactose Phosphorylase, the Last Unknown Enzyme in the Smirnoff-Wheeler Pathway to Ascorbic Acid in Plants.
  Journal
J Biol Chem 282:18879-85 (2007)
DOI:10.1074/jbc.M702094200
Reference
PMID:14996803
  Authors
Campos E, Baldoma L, Aguilar J, Badia J.
  Title
Regulation of expression of the divergent ulaG and ulaABCDEF operons involved in LaAscorbate dissimilation in Escherichia coli.
  Journal
J Bacteriol 186:1720-8 (2004)
DOI:10.1128/JB.186.6.1720-1728.2004
Reference
PMID:12644495
  Authors
Zhang Z, Aboulwafa M, Smith MH, Saier MH Jr.
  Title
The ascorbate transporter of Escherichia coli.
  Journal
J Bacteriol 185:2243-50 (2003)
DOI:10.1128/JB.185.7.2243-2250.2003
Related
pathway
osa00020  Citrate cycle (TCA cycle)
osa00040  Pentose and glucuronate interconversions
osa00051  Fructose and mannose metabolism
osa00520  Amino sugar and nucleotide sugar metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00053   

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