KEGG   PATHWAY: aew00900
Entry
aew00900                    Pathway                                
Name
Terpenoid backbone biosynthesis - Actinidia eriantha (wild kiwifruit)
Description
Terpenoids, also known as isoprenoids, are a large class of natural products consisting of isoprene (C5) units. There are two biosynthetic pathways, the mevalonate pathway [MD:M00095] and the non-mevalonate pathway or the MEP/DOXP pathway [MD:M00096], for the terpenoid building blocks: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). The action of prenyltransferases then generates higher-order building blocks: geranyl diphosphate (GPP), farsenyl diphosphate (FPP), and geranylgeranyl diphosphate (GGPP), which are the precursors of monoterpenoids (C10), sesquiterpenoids (C15), and diterpenoids (C20), respectively. Condensation of these building blocks gives rise to the precursors of sterols (C30) and carotenoids (C40). The MEP/DOXP pathway is absent in higher animals and fungi, but in green plants the MEP/DOXP and mevalonate pathways co-exist in separate cellular compartments. The MEP/DOXP pathway, operating in the plastids, is responsible for the formation of essential oil monoterpenes and linalyl acetate, some sesquiterpenes, diterpenes, and carotenoids and phytol. The mevalonate pathway, operating in the cytosol, gives rise to triterpenes, sterols, and most sesquiterpenes.
Class
Metabolism; Metabolism of terpenoids and polyketides
Pathway map
aew00900  Terpenoid backbone biosynthesis
aew00900

Module
aew_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:aew00900]
aew_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:aew00900]
aew_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:aew00900]
Other DBs
GO: 0009240 0016091
Organism
Actinidia eriantha (wild kiwifruit) [GN:aew]
Gene
130775116  LOW QUALITY PROTEIN: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
130788510  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
130777587  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
130780748  LOW QUALITY PROTEIN: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
130780869  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
130781140  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
130784836  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
130750399  1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic-like [KO:K00099] [EC:1.1.1.267]
130766712  1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic-like [KO:K00099] [EC:1.1.1.267]
130774476  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like isoform X1 [KO:K00991] [EC:2.7.7.60]
130779093  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic-like isoform X1 [KO:K00991] [EC:2.7.7.60]
130784646  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X1 [KO:K00991] [EC:2.7.7.60]
130767023  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic [KO:K00919] [EC:2.7.1.148]
130753614  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [KO:K01770] [EC:4.6.1.12]
130793973  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [KO:K01770] [EC:4.6.1.12]
130762778  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [KO:K03526] [EC:1.17.7.1 1.17.7.3]
130790515  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic-like [KO:K03526] [EC:1.17.7.1 1.17.7.3]
130778820  LOW QUALITY PROTEIN: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic [KO:K03527] [EC:1.17.7.4]
130789001  acetyl-CoA acetyltransferase 2-like [KO:K00626] [EC:2.3.1.9]
130751980  acetyl-CoA acetyltransferase 2 [KO:K00626] [EC:2.3.1.9]
130783164  acetyl-CoA acetyltransferase 2-like isoform X1 [KO:K00626] [EC:2.3.1.9]
130764910  hydroxymethylglutaryl-CoA synthase-like [KO:K01641] [EC:2.3.3.10]
130752424  hydroxymethylglutaryl-CoA synthase-like isoform X1 [KO:K01641] [EC:2.3.3.10]
130792717  hydroxymethylglutaryl-CoA synthase-like [KO:K01641] [EC:2.3.3.10]
130775973  3-hydroxy-3-methylglutaryl coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
130777253  3-hydroxy-3-methylglutaryl coenzyme A reductase 2-B-like [KO:K00021] [EC:1.1.1.34]
130777463  3-hydroxy-3-methylglutaryl coenzyme A reductase 2-B-like [KO:K00021] [EC:1.1.1.34]
130778431  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
130784651  3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
130758818  3-hydroxy-3-methylglutaryl coenzyme A reductase 1-like [KO:K00021] [EC:1.1.1.34]
130785155  3-hydroxy-3-methylglutaryl-coenzyme A reductase-like [KO:K00021] [EC:1.1.1.34]
130795045  mevalonate kinase-like [KO:K00869] [EC:2.7.1.36]
130783971  mevalonate kinase-like [KO:K00869] [EC:2.7.1.36]
130765760  phosphomevalonate kinase, peroxisomal-like [KO:K00938] [EC:2.7.4.2]
130766777  phosphomevalonate kinase, peroxisomal-like [KO:K00938] [EC:2.7.4.2]
130760723  diphosphomevalonate decarboxylase 2-like [KO:K01597] [EC:4.1.1.33]
130764428  diphosphomevalonate decarboxylase MVD1, peroxisomal-like isoform X1 [KO:K01597] [EC:4.1.1.33]
130752735  diphosphomevalonate decarboxylase 2-like [KO:K01597] [EC:4.1.1.33]
130779427  isopentenyl phosphate kinase [KO:K06981] [EC:2.7.4.26]
130760443  isopentenyl-diphosphate Delta-isomerase I [KO:K01823] [EC:5.3.3.2]
130760527  isopentenyl-diphosphate Delta-isomerase I-like [KO:K01823] [EC:5.3.3.2]
130764490  isopentenyl-diphosphate Delta-isomerase I-like [KO:K01823] [EC:5.3.3.2]
130761149  farnesyl pyrophosphate synthase-like [KO:K00787] [EC:2.5.1.1 2.5.1.10]
130790462  farnesyl pyrophosphate synthase [KO:K00787] [EC:2.5.1.1 2.5.1.10]
130760837  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like isoform X1 [KO:K14066] [EC:2.5.1.1]
130779474  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like isoform X1 [KO:K14066] [EC:2.5.1.1]
130753531  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like isoform X1 [KO:K14066] [EC:2.5.1.1]
130777538  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130777635  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130779030  LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130769070  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130758066  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130758187  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130784709  heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130772520  heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130760014  geranylgeranyl pyrophosphate synthase, chloroplastic-like [KO:K13789] [EC:2.5.1.1 2.5.1.10 2.5.1.29]
130750868  solanesyl diphosphate synthase 2, chloroplastic-like [KO:K05356] [EC:2.5.1.84 2.5.1.85]
130790311  LOW QUALITY PROTEIN: solanesyl diphosphate synthase 1, chloroplastic-like [KO:K05356] [EC:2.5.1.84 2.5.1.85]
130761309  dehydrodolichyl diphosphate synthase CPT3-like [KO:K11778] [EC:2.5.1.87]
130786697  uncharacterized protein LOC130786697 isoform X1 [KO:K11778] [EC:2.5.1.87]
130786698  LOW QUALITY PROTEIN: uncharacterized protein LOC130786698 [KO:K11778] [EC:2.5.1.87]
130784454  dehydrodolichyl diphosphate synthase 6-like [KO:K11778] [EC:2.5.1.87]
130784655  LOW QUALITY PROTEIN: dehydrodolichyl diphosphate synthase 6-like [KO:K11778] [EC:2.5.1.87]
130761079  geranylgeranyl diphosphate reductase, chloroplastic [KO:K10960] [EC:1.3.1.83 1.3.1.111]
130761128  geranylgeranyl diphosphate reductase, chloroplastic [KO:K10960] [EC:1.3.1.83 1.3.1.111]
130754337  geranylgeranyl diphosphate reductase, chloroplastic-like [KO:K10960] [EC:1.3.1.83 1.3.1.111]
130791847  LOW QUALITY PROTEIN: tricyclene synthase EBOS, chloroplastic-like [KO:K12742] [EC:4.2.3.27]
130775985  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like [KO:K05955] [EC:2.5.1.58 2.5.1.59]
130750811  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like [KO:K05955] [EC:2.5.1.58 2.5.1.59]
130753937  protein farnesyltransferase subunit beta-like isoform X1 [KO:K05954] [EC:2.5.1.58]
130769360  protein farnesyltransferase subunit beta-like isoform X1 [KO:K05954] [EC:2.5.1.58]
130788922  CAAX prenyl protease 2 [KO:K08658] [EC:3.4.26.1]
130792498  CAAX prenyl protease 1 homolog [KO:K06013] [EC:3.4.24.84]
130781808  CAAX prenyl protease 1 homolog [KO:K06013] [EC:3.4.24.84]
130775083  protein-S-isoprenylcysteine O-methyltransferase B-like isoform X1 [KO:K00587] [EC:2.1.1.100]
130750778  LOW QUALITY PROTEIN: protein-S-isoprenylcysteine O-methyltransferase B-like [KO:K00587] [EC:2.1.1.100]
130774170  isoprenylcysteine alpha-carbonyl methylesterase ICME-like isoform X1 [KO:K15889] [EC:3.1.1.-]
130790776  isoprenylcysteine alpha-carbonyl methylesterase ICME-like isoform X1 [KO:K15889] [EC:3.1.1.-]
130768393  probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 [KO:K15889] [EC:3.1.1.-]
130772348  probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2 [KO:K15889] [EC:3.1.1.-]
130785455  farnesylcysteine lyase [KO:K05906] [EC:1.8.3.5 1.8.3.6]
130758972  uncharacterized protein LOC130758972 [KO:K15891] [EC:1.1.1.354]
130770860  probable phytol kinase 2, chloroplastic isoform X1 [KO:K15892] [EC:2.7.1.216]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00118  D-Glyceraldehyde 3-phosphate
C00129  Isopentenyl diphosphate
C00235  Dimethylallyl diphosphate
C00332  Acetoacetyl-CoA
C00341  Geranyl diphosphate
C00353  Geranylgeranyl diphosphate
C00356  (S)-3-Hydroxy-3-methylglutaryl-CoA
C00418  (R)-Mevalonate
C00448  trans,trans-Farnesyl diphosphate
C01107  (R)-5-Phosphomevalonate
C01126  (2E,6E)-Farnesol
C01143  (R)-5-Diphosphomevalonate
C01230  all-trans-Hexaprenyl diphosphate
C02321  cis-1,4-Polyisoprene
C03461  2-trans,6-trans-Farnesal
C04145  all-trans-Nonaprenyl diphosphate
C04146  all-trans-Octaprenyl diphosphate
C04216  all-trans-Heptaprenyl diphosphate
C04506  Protein C-terminal S-farnesyl-L-cysteine
C04574  di-trans,poly-cis-Undecaprenyl diphosphate
C04748  Protein C-terminal S-farnesyl-L-cysteine methyl ester
C05427  Phytyl diphosphate
C05859  ditrans,polycis-Polyprenyl diphosphate
C06081  Polyprenol
C11434  2-C-Methyl-D-erythritol 4-phosphate
C11435  4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol
C11436  2-Phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
C11437  1-Deoxy-D-xylulose 5-phosphate
C11453  2-C-Methyl-D-erythritol 2,4-cyclodiphosphate
C11811  1-Hydroxy-2-methyl-2-butenyl 4-diphosphate
C16521  Isoprene
C16826  2-cis,6-trans-Farnesyl diphosphate
C17432  all-trans-Decaprenyl diphosphate
C18321  trans,octacis-Decaprenyl diphosphate
C19691  Farnesylcysteine
C19760  2-cis,6-cis-Farnesyl diphosphate
C19852  tritrans,heptacis-Undecaprenyl diphosphate
C19853  trans,polycis-Polyprenyl diphosphate
C20120  S-Farnesyl protein
C20121  trans,trans-Farnesyl phosphate
C20345  Isopentenyl phosphate
C20847  (R)-Mevalonate 3-phosphate
C20848  (R)-Mevalonate 3,5-bisphosphate
C22453  trans-Anhydromevalonate 5-phosphate
Reference
  Authors
Lange BM, Ghassemian M.
  Title
Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism.
  Journal
Plant Mol Biol 51:925-48 (2003)
DOI:10.1023/A:1023005504702
Reference
  Authors
Saiki R, Nagata A, Kainou T, Matsuda H, Kawamukai M
  Title
Characterization of solanesyl and decaprenyl diphosphate synthases in mice and humans.
  Journal
FEBS J 272:5606-22 (2005)
DOI:10.1111/j.1742-4658.2005.04956.x
Reference
PMID:9858571
  Authors
Sato M, Sato K, Nishikawa S, Hirata A, Kato J, Nakano A
  Title
The yeast RER2 gene, identified by endoplasmic reticulum protein localization mutations, encodes cis-prenyltransferase, a key enzyme in dolichol synthesis.
  Journal
Mol Cell Biol 19:471-83 (1999)
DOI:10.1128/MCB.19.1.471
Reference
  Authors
Vannice JC, Skaff DA, Keightley A, Addo JK, Wyckoff GJ, Miziorko HM
  Title
Identification in Haloferax volcanii of phosphomevalonate decarboxylase and isopentenyl phosphate kinase as catalysts of the terminal enzyme reactions in an  archaeal alternate mevalonate pathway.
  Journal
J Bacteriol 196:1055-63 (2014)
DOI:10.1128/JB.01230-13
Related
pathway
aew00010  Glycolysis / Gluconeogenesis
aew00100  Steroid biosynthesis
aew00130  Ubiquinone and other terpenoid-quinone biosynthesis
aew00270  Cysteine and methionine metabolism
aew00510  N-Glycan biosynthesis
aew00902  Monoterpenoid biosynthesis
aew00904  Diterpenoid biosynthesis
aew00906  Carotenoid biosynthesis
aew00908  Zeatin biosynthesis
aew00909  Sesquiterpenoid and triterpenoid biosynthesis
KO pathway
ko00900   
LinkDB

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