KEGG   PATHWAY: ath01100
Entry
ath01100          Global    Pathway                                
Name
Metabolic pathways - Arabidopsis thaliana (thale cress)
Class
Pathway map
ath01100  Metabolic pathways
ath01100

Module
ath_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ath01100]
ath_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ath01100]
ath_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ath01100]
ath_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ath01100]
ath_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ath01100]
ath_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ath01100]
ath_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ath01100]
ath_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ath01100]
ath_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ath01100]
ath_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ath01100]
ath_M00012  Glyoxylate cycle [PATH:ath01100]
ath_M00015  Proline biosynthesis, glutamate => proline [PATH:ath01100]
ath_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ath01100]
ath_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ath01100]
ath_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ath01100]
ath_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ath01100]
ath_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ath01100]
ath_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ath01100]
ath_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ath01100]
ath_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:ath01100]
ath_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ath01100]
ath_M00034  Methionine salvage pathway [PATH:ath01100]
ath_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ath01100]
ath_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ath01100]
ath_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:ath01100]
ath_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ath01100]
ath_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ath01100]
ath_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ath01100]
ath_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ath01100]
ath_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ath01100]
ath_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ath01100]
ath_M00072  N-glycosylation by oligosaccharyltransferase [PATH:ath01100]
ath_M00073  N-glycan precursor trimming [PATH:ath01100]
ath_M00081  Pectin degradation [PATH:ath01100]
ath_M00082  Fatty acid biosynthesis, initiation [PATH:ath01100]
ath_M00083  Fatty acid biosynthesis, elongation [PATH:ath01100]
ath_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ath01100]
ath_M00087  beta-Oxidation [PATH:ath01100]
ath_M00089  Triacylglycerol biosynthesis [PATH:ath01100]
ath_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:ath01100]
ath_M00094  Ceramide biosynthesis [PATH:ath01100]
ath_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:ath01100]
ath_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ath01100]
ath_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:ath01100]
ath_M00098  Acylglycerol degradation [PATH:ath01100]
ath_M00099  Sphingosine biosynthesis [PATH:ath01100]
ath_M00100  Sphingosine degradation [PATH:ath01100]
ath_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:ath01100]
ath_M00113  Jasmonic acid biosynthesis [PATH:ath01100]
ath_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:ath01100]
ath_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ath01100]
ath_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ath01100]
ath_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ath01100]
ath_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ath01100]
ath_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ath01100]
ath_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ath01100]
ath_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:ath01100]
ath_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:ath01100]
ath_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:ath01100]
ath_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:ath01100]
ath_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:ath01100]
ath_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:ath01100]
ath_M00148  Succinate dehydrogenase (ubiquinone) [PATH:ath01100]
ath_M00151  Cytochrome bc1 complex respiratory unit [PATH:ath01100]
ath_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ath01100]
ath_M00161  Photosystem II [PATH:ath01100]
ath_M00163  Photosystem I [PATH:ath01100]
ath_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ath01100]
ath_M00169  CAM (Crassulacean acid metabolism), light [PATH:ath01100]
ath_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:ath01100]
ath_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:ath01100]
ath_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:ath01100]
ath_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ath01100]
ath_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:ath01100]
ath_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:ath01100]
ath_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:ath01100]
ath_M00370  Glucosinolate biosynthesis, tryptophan => glucobrassicin [PATH:ath01100]
ath_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:ath01100]
ath_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:ath01100]
ath_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ath01100]
ath_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:ath01100]
ath_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:ath01100]
ath_M00549  UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:ath01100]
ath_M00555  Betaine biosynthesis, choline => betaine [PATH:ath01100]
ath_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ath01100]
ath_M00621  Glycine cleavage system [PATH:ath01100]
ath_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ath01100]
ath_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ath01100]
ath_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ath01100]
ath_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ath01100]
ath_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:ath01100]
ath_M00892  UDP-GlcNAc biosynthesis, eukaryotes, Fru-6P => UDP-GlcNAc [PATH:ath01100]
ath_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:ath01100]
ath_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:ath01100]
ath_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:ath01100]
ath_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ath01100]
ath_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:ath01100]
ath_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:ath01100]
ath_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:ath01100]
ath_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:ath01100]
ath_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ath01100]
ath_M00970  Proline degradation, proline => glutamate [PATH:ath01100]
ath_M00972  Proline metabolism [PATH:ath01100]
ath_M00987  Assimilatory sulfate reduction, plants, sulfate => H2S [PATH:ath01100]
Organism
Arabidopsis thaliana (thale cress) [GN:ath]
Related
pathway
ath00010  Glycolysis / Gluconeogenesis
ath00020  Citrate cycle (TCA cycle)
ath00030  Pentose phosphate pathway
ath00040  Pentose and glucuronate interconversions
ath00051  Fructose and mannose metabolism
ath00052  Galactose metabolism
ath00053  Ascorbate and aldarate metabolism
ath00061  Fatty acid biosynthesis
ath00062  Fatty acid elongation
ath00071  Fatty acid degradation
ath00073  Cutin, suberine and wax biosynthesis
ath00100  Steroid biosynthesis
ath00130  Ubiquinone and other terpenoid-quinone biosynthesis
ath00190  Oxidative phosphorylation
ath00195  Photosynthesis
ath00196  Photosynthesis - antenna proteins
ath00220  Arginine biosynthesis
ath00230  Purine metabolism
ath00232  Caffeine metabolism
ath00240  Pyrimidine metabolism
ath00250  Alanine, aspartate and glutamate metabolism
ath00260  Glycine, serine and threonine metabolism
ath00261  Monobactam biosynthesis
ath00270  Cysteine and methionine metabolism
ath00280  Valine, leucine and isoleucine degradation
ath00290  Valine, leucine and isoleucine biosynthesis
ath00300  Lysine biosynthesis
ath00310  Lysine degradation
ath00330  Arginine and proline metabolism
ath00340  Histidine metabolism
ath00350  Tyrosine metabolism
ath00360  Phenylalanine metabolism
ath00380  Tryptophan metabolism
ath00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ath00410  beta-Alanine metabolism
ath00430  Taurine and hypotaurine metabolism
ath00440  Phosphonate and phosphinate metabolism
ath00450  Selenocompound metabolism
ath00460  Cyanoamino acid metabolism
ath00470  D-Amino acid metabolism
ath00480  Glutathione metabolism
ath00500  Starch and sucrose metabolism
ath00510  N-Glycan biosynthesis
ath00511  Other glycan degradation
ath00513  Various types of N-glycan biosynthesis
ath00514  Other types of O-glycan biosynthesis
ath00520  Amino sugar and nucleotide sugar metabolism
ath00531  Glycosaminoglycan degradation
ath00540  Lipopolysaccharide biosynthesis
ath00541  Biosynthesis of various nucleotide sugars
ath00543  Exopolysaccharide biosynthesis
ath00561  Glycerolipid metabolism
ath00562  Inositol phosphate metabolism
ath00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ath00564  Glycerophospholipid metabolism
ath00565  Ether lipid metabolism
ath00590  Arachidonic acid metabolism
ath00591  Linoleic acid metabolism
ath00592  alpha-Linolenic acid metabolism
ath00600  Sphingolipid metabolism
ath00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ath00603  Glycosphingolipid biosynthesis - globo and isoglobo series
ath00604  Glycosphingolipid biosynthesis - ganglio series
ath00620  Pyruvate metabolism
ath00630  Glyoxylate and dicarboxylate metabolism
ath00640  Propanoate metabolism
ath00650  Butanoate metabolism
ath00660  C5-Branched dibasic acid metabolism
ath00670  One carbon pool by folate
ath00710  Carbon fixation by Calvin cycle
ath00730  Thiamine metabolism
ath00740  Riboflavin metabolism
ath00750  Vitamin B6 metabolism
ath00760  Nicotinate and nicotinamide metabolism
ath00770  Pantothenate and CoA biosynthesis
ath00780  Biotin metabolism
ath00785  Lipoic acid metabolism
ath00790  Folate biosynthesis
ath00860  Porphyrin metabolism
ath00900  Terpenoid backbone biosynthesis
ath00901  Indole alkaloid biosynthesis
ath00902  Monoterpenoid biosynthesis
ath00904  Diterpenoid biosynthesis
ath00905  Brassinosteroid biosynthesis
ath00906  Carotenoid biosynthesis
ath00908  Zeatin biosynthesis
ath00909  Sesquiterpenoid and triterpenoid biosynthesis
ath00910  Nitrogen metabolism
ath00920  Sulfur metabolism
ath00940  Phenylpropanoid biosynthesis
ath00941  Flavonoid biosynthesis
ath00942  Anthocyanin biosynthesis
ath00944  Flavone and flavonol biosynthesis
ath00950  Isoquinoline alkaloid biosynthesis
ath00960  Tropane, piperidine and pyridine alkaloid biosynthesis
ath00965  Betalain biosynthesis
ath00966  Glucosinolate biosynthesis
ath00999  Biosynthesis of various plant secondary metabolites
ath01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   

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