KEGG   PATHWAY: boe03082
Entry
boe03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Brassica oleracea (wild cabbage)
Class
Genetic Information Processing; Chromosome
Pathway map
boe03082  ATP-dependent chromatin remodeling
boe03082

Organism
Brassica oleracea (wild cabbage) [GN:boe]
Gene
106295214  putative chromatin-remodeling complex ATPase chain [KO:K11654] [EC:5.6.2.-]
106318017  putative chromatin-remodeling complex ATPase chain [KO:K11654] [EC:5.6.2.-]
106329100  putative chromatin-remodeling complex ATPase chain [KO:K11654] [EC:5.6.2.-]
106332033  DNA polymerase epsilon subunit 3-like [KO:K02326] [EC:2.7.7.7]
106342412  DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
106324775  histone-binding protein MSI1-like [KO:K10752]
106335185  histone-binding protein MSI1 [KO:K10752]
106318548  histone-binding protein MSI1-like [KO:K10752]
106318601  WD-40 repeat-containing protein MSI2 [KO:K10752]
106301566  WD-40 repeat-containing protein MSI2-like [KO:K10752]
106310843  WD-40 repeat-containing protein MSI4-like [KO:K10752]
106311620  WD-40 repeat-containing protein MSI4-like [KO:K10752]
106301366  WD-40 repeat-containing protein MSI4 [KO:K10752]
106313210  WD-40 repeat-containing protein MSI4-like [KO:K10752]
106329231  CHD3-type chromatin-remodeling factor PICKLE-like [KO:K11643] [EC:5.6.2.-]
106311755  CHD3-type chromatin-remodeling factor PICKLE [KO:K11643] [EC:5.6.2.-]
106300026  CHD3-type chromatin-remodeling factor PICKLE [KO:K11643] [EC:5.6.2.-]
106328336  histone deacetylase 9 [KO:K06067] [EC:3.5.1.98]
106318929  histone deacetylase 6 [KO:K06067] [EC:3.5.1.98]
106308037  histone deacetylase 7-like [KO:K06067] [EC:3.5.1.98]
106328247  histone deacetylase 6 [KO:K06067] [EC:3.5.1.98]
106333790  histone deacetylase 19 isoform X1 [KO:K06067] [EC:3.5.1.98]
106310716  histone deacetylase 7-like [KO:K06067] [EC:3.5.1.98]
106341267  ATP-dependent helicase BRM-like isoform X1 [KO:K11647] [EC:5.6.2.-]
106332161  ATP-dependent helicase BRM [KO:K11647] [EC:5.6.2.-]
106292934  chromatin structure-remodeling complex protein BSH [KO:K11648]
106342221  SWI/SNF complex subunit SWI3A [KO:K11649]
106337338  SWI/SNF complex subunit SWI3B [KO:K11649]
106308644  SWI/SNF complex subunit SWI3D [KO:K11649]
106312283  SWI/SNF complex subunit SWI3C-like [KO:K11649]
106295050  SWI/SNF complex subunit SWI3C [KO:K11649]
106335610  SWI/SNF complex subunit SWI3A-like [KO:K11649]
106331274  SWI/SNF complex subunit SWI3D-like [KO:K11649]
106319196  SWI/SNF complex component SNF12 homolog [KO:K11650]
106335282  SWI/SNF complex component SNF12 homolog [KO:K11650]
106295780  actin-related protein 4 [KO:K11340]
106309593  actin-related protein 4-like [KO:K11340]
106312429  transcription factor GTE4-like [KO:K22184]
106300994  bromodomain-containing protein 9 [KO:K22184]
106296093  bromodomain-containing protein 9-like [KO:K22184]
106311827  DNA helicase INO80 [KO:K11665] [EC:5.6.2.-]
106317384  chromatin-remodeling complex subunit ies6-like [KO:K11667]
106311471  chromatin-remodeling complex subunit ies6 [KO:K11667]
106293899  chromatin-remodeling complex subunit ies6-like [KO:K11667]
106334973  uncharacterized protein LOC106334973 [KO:K11671]
106296671  ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
106334454  ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
106331491  ruvB-like protein 1 [KO:K04499] [EC:5.6.2.4]
106327564  ruvB-like protein 1 [KO:K04499] [EC:5.6.2.4]
106319171  ruvB-like protein 1 [KO:K04499] [EC:5.6.2.4]
106336195  ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
106295381  actin-related protein 5 [KO:K11672]
106322514  actin-related protein 9 isoform X1 [KO:K11673]
106294541  protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [KO:K11661] [EC:5.6.2.-]
106320533  SWR1-complex protein 4 isoform X1 [KO:K11324]
106303630  transcription initiation factor TFIID subunit 14b [KO:K11341]
106304559  transcription initiation factor TFIID subunit 14 isoform X1 [KO:K11341]
106337128  SWR1 complex subunit 2 [KO:K11664]
106301786  probable histone H2A.5 [KO:K11251]
106317918  probable histone H2A.5 [KO:K11251]
106320054  probable histone H2A.1 [KO:K11251]
106331430  probable histone H2A.2 [KO:K11251]
106300483  probable histone H2A variant 3 [KO:K11251]
106292868  probable histone H2A.2 [KO:K11251]
106296339  histone H2A variant 1 [KO:K11251]
106329334  probable histone H2A.7 [KO:K11251]
106342291  histone H2A variant 1-like [KO:K11251]
106295459  probable histone H2AXa [KO:K11251]
106315574  probable histone H2A.7 [KO:K11251]
106318826  probable histone H2A variant 3 [KO:K11251]
106324794  probable histone H2A.5 [KO:K11251]
106324812  probable histone H2A.7 [KO:K11251]
106311693  histone H2A variant 1-like [KO:K11251]
106336341  probable histone H2A variant 2 [KO:K11251]
106342340  probable histone H2A variant 3 [KO:K11251]
106312192  probable histone H2AXa [KO:K11251]
106300221  probable histone H2A variant 3 [KO:K11251]
106318253  probable histone H2A.2 [KO:K11251]
106328773  probable histone H2A variant 3 isoform X1 [KO:K11251]
106318380  histone H2A.6 [KO:K11251]
106323115  probable histone H2A.4 [KO:K11251]
106331264  actin-related protein 6 [KO:K11662]
106318865  SWR1 complex subunit 6 [KO:K11663]
106333282  SWR1 complex subunit 6-like [KO:K11663]
106315784  transformation/transcription domain-associated protein-like isoform X1 [KO:K08874]
106333537  transformation/transcription domain-associated protein [KO:K08874]
106302387  transcription-associated protein 1 [KO:K08874]
106309543  protein MRG2 isoform X1 [KO:K11339]
106304007  protein MRG1 isoform X1 [KO:K11339]
106296881  uncharacterized protein LOC106296881 isoform X1 [KO:K11322]
106299848  uncharacterized protein LOC106299848 [KO:K11322]
106339558  chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

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