KEGG   PATHWAY: char00250
Entry
char00250                   Pathway                                
Name
Alanine, aspartate and glutamate metabolism - Clupea harengus (Atlantic herring)
Class
Metabolism; Amino acid metabolism
Pathway map
char00250  Alanine, aspartate and glutamate metabolism
char00250

Module
char_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:char00250]
Other DBs
GO: 0006522 0006531 0006536
Organism
Clupea harengus (Atlantic herring) [GN:char]
Gene
105904377  got1; aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
105895275  got1l1; putative aspartate aminotransferase, cytoplasmic 2 [KO:K14454] [EC:2.6.1.1]
105907226  got2b; aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
105904503  got2a; aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
116225186  LOW QUALITY PROTEIN: aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
105899129  L-amino-acid oxidase-like [KO:K03334] [EC:1.4.3.2]
105893732  il4i1; L-amino-acid oxidase [KO:K03334] [EC:1.4.3.2]
105895726  ddo; D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
122128572  L-asparaginase 1-like [KO:K01424] [EC:3.5.1.1]
105911569  asrgl1; isoaspartyl peptidase/L-asparaginase isoform X1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
105890890  si:dkey-103j14.5; isoaspartyl peptidase/L-asparaginase isoform X1 [KO:K13051] [EC:3.5.1.1 3.4.19.5]
105902139  asns; asparagine synthetase [glutamine-hydrolyzing] [KO:K01953] [EC:6.3.5.4]
116225193  asparagine synthetase [glutamine-hydrolyzing]-like [KO:K01953] [EC:6.3.5.4]
105905863  asparagine synthetase [glutamine-hydrolyzing]-like [KO:K01953] [EC:6.3.5.4]
105907218  asparagine synthetase [glutamine-hydrolyzing]-like [KO:K01953] [EC:6.3.5.4]
122131277  asparagine synthetase [glutamine-hydrolyzing]-like [KO:K01953] [EC:6.3.5.4]
105895082  nit2; omega-amidase NIT2 [KO:K13566] [EC:3.5.1.3]
105889375  si:ch211-217a12.1; alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
122129508  gpt2; alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
116222083  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
122130863  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
105891332  alanine aminotransferase 2-like isoform X1 [KO:K00814] [EC:2.6.1.2]
116217927  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
105899541  agxtb; alanine--glyoxylate and serine--pyruvate aminotransferase b [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
105898262  agxta; alanine--glyoxylate and serine--pyruvate aminotransferase a [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
105911486  agxt2; alanine--glyoxylate aminotransferase 2, mitochondrial [KO:K00827] [EC:2.6.1.44 2.6.1.40]
105890762  ass1; argininosuccinate synthase [KO:K01940] [EC:6.3.4.5]
105896264  asl; argininosuccinate lyase isoform X1 [KO:K01755] [EC:4.3.2.1]
105908321  adss1; adenylosuccinate synthetase isozyme 1 [KO:K01939] [EC:6.3.4.4]
105900402  adssl; adenylosuccinate synthase, like [KO:K01939] [EC:6.3.4.4]
105912463  adss2; adenylosuccinate synthetase isozyme 2 [KO:K01939] [EC:6.3.4.4]
105899462  adenylosuccinate synthetase isozyme 1 B [KO:K01939] [EC:6.3.4.4]
122131872  adsl; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
105904563  nat8l; N-acetylaspartate synthetase [KO:K18309] [EC:2.3.1.17]
116218338  N-acetylaspartate synthetase-like [KO:K18309] [EC:2.3.1.17]
105902183  rimkla; beta-citrylglutamate synthase B [KO:K18310] [EC:6.3.1.17 6.3.2.41]
105895395  aspartoacylase isoform X10 [KO:K01437] [EC:3.5.1.15]
105903012  gad1a; glutamate decarboxylase 1 [KO:K01580] [EC:4.1.1.15]
105889318  gad2; glutamate decarboxylase 2 [KO:K01580] [EC:4.1.1.15]
105911763  gad1b; glutamate decarboxylase 1b isoform X1 [KO:K01580] [EC:4.1.1.15]
122130693  LOW QUALITY PROTEIN: glutamate decarboxylase 2-like [KO:K01580] [EC:4.1.1.15]
105900485  gad3; glutamate decarboxylase 1 [KO:K01580] [EC:4.1.1.15]
105899982  abat; 4-aminobutyrate aminotransferase, mitochondrial [KO:K13524] [EC:2.6.1.19 2.6.1.22]
105900204  4-aminobutyrate aminotransferase, mitochondrial-like [KO:K13524] [EC:2.6.1.19 2.6.1.22]
105896177  aldh5a1; succinate-semialdehyde dehydrogenase, mitochondrial [KO:K00139] [EC:1.2.1.24]
105904123  glud1b; glutamate dehydrogenase 1b [KO:K00261] [EC:1.4.1.3]
105900305  glud1a; glutamate dehydrogenase 1a [KO:K00261] [EC:1.4.1.3]
105907932  aldh4a1; delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial [KO:K00294] [EC:1.2.1.88]
105902568  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
105895159  glulb; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
105901561  cad; CAD protein isoform X2 [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
105913285  glsb; glutaminase kidney isoform, mitochondrial isoform X1 [KO:K01425] [EC:3.5.1.2]
105899323  glutaminase kidney isoform, mitochondrial-like [KO:K01425] [EC:3.5.1.2]
105913414  glsl; glutaminase liver isoform, mitochondrial isoform X3 [KO:K01425] [EC:3.5.1.2]
105905658  glsa; glutaminase a isoform X1 [KO:K01425] [EC:3.5.1.2]
122131890  glutaminase kidney isoform, mitochondrial-like [KO:K01425] [EC:3.5.1.2]
105908013  cps1; carbamoyl-phosphate synthase [ammonia], mitochondrial [KO:K01948] [EC:6.3.4.16]
105912367  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X1 [KO:K00820] [EC:2.6.1.16]
105902760  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 [KO:K00820] [EC:2.6.1.16]
105907472  gfpt2; glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [KO:K00820] [EC:2.6.1.16]
105895182  ppat; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Compound
C00014  Ammonia
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00041  L-Alanine
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00122  Fumarate
C00152  L-Asparagine
C00158  Citrate
C00169  Carbamoyl phosphate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00352  D-Glucosamine 6-phosphate
C00402  D-Aspartate
C00438  N-Carbamoyl-L-aspartate
C00940  2-Oxoglutaramate
C01042  N-Acetyl-L-aspartate
C02362  2-Oxosuccinamate
C03090  5-Phosphoribosylamine
C03406  N-(L-Arginino)succinate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03912  (S)-1-Pyrroline-5-carboxylate
C12270  N-Acetylaspartylglutamate
C20775  beta-Citryl-L-glutamate
C20776  N-Acetylaspartylglutamylglutamate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Related
pathway
char00010  Glycolysis / Gluconeogenesis
char00020  Citrate cycle (TCA cycle)
char00220  Arginine biosynthesis
char00230  Purine metabolism
char00240  Pyrimidine metabolism
char00260  Glycine, serine and threonine metabolism
char00330  Arginine and proline metabolism
char00340  Histidine metabolism
char00410  beta-Alanine metabolism
char00470  D-Amino acid metabolism
char00480  Glutathione metabolism
char00520  Amino sugar and nucleotide sugar metabolism
char00620  Pyruvate metabolism
char00630  Glyoxylate and dicarboxylate metabolism
char00650  Butanoate metabolism
char00760  Nicotinate and nicotinamide metabolism
char00770  Pantothenate and CoA biosynthesis
char00860  Porphyrin metabolism
char00910  Nitrogen metabolism
KO pathway
ko00250   
LinkDB

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