KEGG   PATHWAY: dcr03020
Entry
dcr03020                    Pathway                                
Name
RNA polymerase - Daucus carota (carrot)
Class
Genetic Information Processing; Transcription
Pathway map
dcr03020  RNA polymerase
dcr03020

Other DBs
GO: 0000428
Organism
Daucus carota (carrot) [GN:dcr]
Gene
88614238  rpoB; RNA polymerase beta subunit [KO:K03043] [EC:2.7.7.6]
135150674  DNA-directed RNA polymerase subunit beta [KO:K03043] [EC:2.7.7.6]
135150673  DNA-directed RNA polymerase subunit beta'' [KO:K03046] [EC:2.7.7.6]
88614236  rpoC2; RNA polymerase beta'' subunit [KO:K03046] [EC:2.7.7.6]
88614237  rpoC1; RNA polymerase beta' subunit [KO:K03046] [EC:2.7.7.6]
135150682  DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
135150693  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
135150695  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
135151228  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
135151230  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
88614294  rpoA; RNA polymerase alpha subunit [KO:K03040] [EC:2.7.7.6]
108204225  DNA-directed RNA polymerase II subunit RPB2 [KO:K03010] [EC:2.7.7.6]
108222754  DNA-directed RNA polymerase II subunit RPB1 [KO:K03006] [EC:2.7.7.6]
108215338  DNA-directed RNA polymerases II, IV and V subunit 3 [KO:K03011]
108225767  DNA-directed RNA polymerases II, IV and V subunit 3 [KO:K03011]
108207893  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
108225164  DNA-directed RNA polymerases II, IV and V subunit 11 [KO:K03008]
108216121  DNA-directed RNA polymerase II subunit 4 [KO:K03012]
108220612  DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [KO:K03012]
108202609  DNA-directed RNA polymerases IV and V subunit 4-like [KO:K03012]
108206166  DNA-directed RNA polymerase II subunit RPB7 [KO:K03015]
108197529  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
108195390  DNA-directed RNA polymerases II, IV and V subunit 9B [KO:K03017]
108214355  DNA-directed RNA polymerase III subunit 2 isoform X1 [KO:K03021] [EC:2.7.7.6]
108227863  DNA-directed RNA polymerase III subunit 2 [KO:K03021] [EC:2.7.7.6]
108223094  DNA-directed RNA polymerase III subunit 1 [KO:K03018] [EC:2.7.7.6]
108206774  uncharacterized protein LOC108206774 [KO:K03020]
108216054  uncharacterized protein LOC108216054 [KO:K03020]
108216039  uncharacterized protein LOC108216039 [KO:K03027]
108214635  uncharacterized protein LOC108214635 isoform X1 [KO:K03023]
108216043  uncharacterized protein LOC108216043 isoform X1 [KO:K03023]
108220512  DNA-directed RNA polymerase III subunit rpc4 [KO:K03026]
108197800  uncharacterized protein LOC108197800 [KO:K03026]
108194378  uncharacterized protein LOC108194378 [KO:K14721]
108195813  uncharacterized protein LOC108195813 [KO:K14721]
108213868  uncharacterized protein LOC108213868 [KO:K03025]
108200229  uncharacterized protein LOC108200229 [KO:K03025]
108224957  uncharacterized protein LOC108224957 [KO:K03024]
108193907  uncharacterized protein LOC108193907 isoform X1 [KO:K03024]
108213912  uncharacterized protein LOC108213912 [KO:K03022]
108216239  uncharacterized protein LOC108216239 [KO:K25304]
108208018  uncharacterized protein LOC108208018 [KO:K03019]
108223101  DNA-directed RNA polymerase I subunit 2 [KO:K03002] [EC:2.7.7.6]
108227340  DNA-directed RNA polymerase I subunit 1 [KO:K02999] [EC:2.7.7.6]
108216676  uncharacterized protein LOC108216676 [KO:K03000]
108196796  DNA-directed RNA polymerase I subunit rpa49 [KO:K03005]
108213061  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
108227476  DNA-directed RNA polymerase V subunit 5A [KO:K03013]
108198821  DNA-directed RNA polymerase V subunit 5A [KO:K03013]
108198919  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
108198988  DNA-directed RNA polymerases II and IV subunit 5A [KO:K03013]
108214125  DNA-directed RNA polymerases II, IV and V subunit 6A-like [KO:K03014]
108220421  DNA-directed RNA polymerases II, IV and V subunit 6A [KO:K03014]
108215206  DNA-directed RNA polymerases II, IV and V subunit 8B isoform X1 [KO:K03016]
108219510  DNA-directed RNA polymerases II and V subunit 8A isoform X1 [KO:K03016]
108217706  DNA-directed RNA polymerases II and V subunit 8A [KO:K03016]
108198732  DNA-directed RNA polymerases II and V subunit 8A isoform X1 [KO:K03016]
108219700  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
108226459  DNA-directed RNA polymerases II, IV and V subunit 12 [KO:K03009]
108220874  DNA-directed RNA polymerase subunit 10-like protein [KO:K03007]
108206665  DNA-directed RNA polymerase IV subunit 1 isoform X1 [KO:K16250] [EC:2.7.7.6]
108209566  DNA-directed RNA polymerase IV subunit 1 isoform X1 [KO:K16250] [EC:2.7.7.6]
108227362  DNA-directed RNA polymerase V subunit 1 [KO:K16251] [EC:2.7.7.6]
108214269  DNA-directed RNA polymerases IV and V subunit 2 [KO:K16252] [EC:2.7.7.6]
108208148  DNA-directed RNA polymerase V subunit 7-like [KO:K16253]
108211106  DNA-directed RNA polymerase V subunit 7-like [KO:K16253]
108195764  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
108197879  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
108200282  DNA-directed RNA polymerase IV subunit 7 [KO:K16253]
108199234  DNA-directed RNA polymerase V subunit 7 [KO:K16253]
Reference
PMID:10499798
  Authors
Zhang G, Campbell EA, Minakhin L, Richter C, Severinov K, Darst SA.
  Title
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.
  Journal
Cell 98:811-824 (1999)
DOI:10.1016/S0092-8674(00)81515-9
Reference
PMID:10784442
  Authors
Cramer P, Bushnell DA, Fu J, Gnatt AL, Maier-Davis B, Thompson NE, Burgess RR, Edwards AM, David PR, Kornberg RD.
  Title
Architecture of RNA polymerase II and implications for the transcription mechanism.
  Journal
Science 288:640-649 (2000)
DOI:10.1126/science.288.5466.640
Reference
PMID:19880312
  Authors
Hirata A, Murakami KS
  Title
Archaeal RNA polymerase.
  Journal
Curr Opin Struct Biol 19:724-31 (2009)
DOI:10.1016/j.sbi.2009.10.006
Reference
PMID:18573085
  Authors
Cramer P, Armache KJ, Baumli S, Benkert S, Brueckner F, Buchen C, Damsma GE, Dengl S, Geiger SR, Jasiak AJ, Jawhari A, Jennebach S, Kamenski T, Kettenberger H, Kuhn CD, Lehmann E, Leike K, Sydow JF, Vannini A
  Title
Structure of eukaryotic RNA polymerases.
  Journal
Annu Rev Biophys 37:337-52 (2008)
DOI:10.1146/annurev.biophys.37.032807.130008
Reference
PMID:31835031
  Authors
Hillen HS, Bartuli J, Grimm C, Dienemann C, Bedenk K, Szalay AA, Fischer U, Cramer P
  Title
Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes.
  Journal
Cell 179:1525-1536.e12 (2019)
DOI:10.1016/j.cell.2019.11.023
KO pathway
ko03020   
LinkDB

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